RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 DEFB133Q30KQ1 61 aa1.68□□□□□ -2.14
HMGB3P26-201ENST00000560051 TNRC18O15417 2968 aaPredicted RBP1.68□□□□□ -2.14
HMGB3P26-201ENST00000560051 GOLGB1Q14789 3259 aaKnown RBP1.67□□□□□ -2.14
HMGB3P26-201ENST00000560051 DEFB136Q30KP8 78 aa1.67□□□□□ -2.14
HMGB3P26-201ENST00000560051 CHD8Q9HCK8 2581 aa1.67□□□□□ -2.14
HMGB3P26-201ENST00000560051 CENPFP49454 3210 aa1.66□□□□□ -2.14
HMGB3P26-201ENST00000560051 UTRNP46939 3433 aa1.66□□□□□ -2.14
HMGB3P26-201ENST00000560051 USP24Q9UPU5 2620 aa1.66□□□□□ -2.14
HMGB3P26-201ENST00000560051 PTPN13Q12923 2485 aa1.65□□□□□ -2.14
HMGB3P26-201ENST00000560051 SRCAPQ6ZRS2 3230 aa1.65□□□□□ -2.14
HMGB3P26-201ENST00000560051 ANKHD1Q8IWZ3 2542 aaKnown RBP1.65□□□□□ -2.15
HMGB3P26-201ENST00000560051 DNAH11Q96DT5 4516 aa1.65□□□□□ -2.15
HMGB3P26-201ENST00000560051 SONP18583 2426 aaKnown RBP1.65□□□□□ -2.15
HMGB3P26-201ENST00000560051 SPART-AS1P0CW21 52 aa1.65□□□□□ -2.15
HMGB3P26-201ENST00000560051 SPINK6Q6UWN8 80 aa1.65□□□□□ -2.15
HMGB3P26-201ENST00000560051 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
HMGB3P26-201ENST00000560051 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
HMGB3P26-201ENST00000560051 HELZ2Q9BYK8 2649 aaKnown RBP1.64□□□□□ -2.15
HMGB3P26-201ENST00000560051 LINC01556Q5JQF7 62 aa1.63□□□□□ -2.15
HMGB3P26-201ENST00000560051 CRYBG3Q68DQ2 2970 aa1.63□□□□□ -2.15
HMGB3P26-201ENST00000560051 AKAP13Q12802 2813 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 SPG11Q96JI7 2443 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 HTTP42858 3142 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 NBPF19A0A087WUL8 3843 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 A0A096LNI7 61 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 DEFB135Q30KP9 77 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 HIVEP3Q5T1R4 2406 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 CSMD3Q7Z407 3707 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 BRCA2P51587 3418 aa1.62□□□□□ -2.15
HMGB3P26-201ENST00000560051 CHD9Q3L8U1 2897 aa1.61□□□□□ -2.15
HMGB3P26-201ENST00000560051 ITPR1Q14643 2758 aa1.61□□□□□ -2.15
HMGB3P26-201ENST00000560051 AKAP9Q99996 3911 aa1.61□□□□□ -2.15
HMGB3P26-201ENST00000560051 ACANP16112 2415 aa1.6□□□□□ -2.15
HMGB3P26-201ENST00000560051 PIEZO1Q92508 2521 aa1.6□□□□□ -2.15
HMGB3P26-201ENST00000560051 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
HMGB3P26-201ENST00000560051 USP9YO00507 2555 aaPredicted RBP1.6□□□□□ -2.15
HMGB3P26-201ENST00000560051 DNAH12Q6ZR08 3092 aa1.6□□□□□ -2.15
HMGB3P26-201ENST00000560051 CELSR1Q9NYQ6 3014 aa1.58□□□□□ -2.16
HMGB3P26-201ENST00000560051 ZFHX4Q86UP3 3567 aa1.58□□□□□ -2.16
HMGB3P26-201ENST00000560051 APCP25054 2843 aa1.58□□□□□ -2.16
HMGB3P26-201ENST00000560051 MAP1AP78559 2803 aaPredicted RBP1.58□□□□□ -2.16
HMGB3P26-201ENST00000560051 CEP350Q5VT06 3117 aa1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 COL6A3P12111 3177 aa1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 USP34Q70CQ2 3546 aa1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 FLNCQ14315 2725 aa1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 CACNA1AO00555 2505 aa1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 RPS29P62273 56 aaKnown RBP1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 MTORP42345 2549 aa1.57□□□□□ -2.16
HMGB3P26-201ENST00000560051 UTP20O75691 2785 aaKnown RBP1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 M0R2T5 61 aa1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 SZT2Q5T011 3432 aa1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 TENM4Q6N022 2769 aa1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 DNAH14Q0VDD8 3507 aa1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 FRYLO94915 3013 aa1.56□□□□□ -2.16
HMGB3P26-201ENST00000560051 A0A096LPF7 62 aa1.55□□□□□ -2.16
HMGB3P26-201ENST00000560051 PRKDCP78527 4128 aaKnown RBP1.55□□□□□ -2.16
HMGB3P26-201ENST00000560051 BSNQ9UPA5 3926 aa1.55□□□□□ -2.16
HMGB3P26-201ENST00000560051 UNC80Q8N2C7 3258 aa1.55□□□□□ -2.16
HMGB3P26-201ENST00000560051 DYNC2H1Q8NCM8 4307 aaKnown RBP1.54□□□□□ -2.16
HMGB3P26-201ENST00000560051 FRYQ5TBA9 3013 aa1.54□□□□□ -2.16
HMGB3P26-201ENST00000560051 NBEAQ8NFP9 2946 aa1.53□□□□□ -2.16
HMGB3P26-201ENST00000560051 RANBP2P49792 3224 aaKnown RBP1.53□□□□□ -2.16
HMGB3P26-201ENST00000560051 MKI67P46013 3256 aaKnown RBP1.53□□□□□ -2.16
HMGB3P26-201ENST00000560051 ITPR3Q14573 2671 aa1.53□□□□□ -2.16
HMGB3P26-201ENST00000560051 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
HMGB3P26-201ENST00000560051 XIRP2A4UGR9 3374 aa1.53□□□□□ -2.17
HMGB3P26-201ENST00000560051 PRUNE2Q8WUY3 3088 aa1.53□□□□□ -2.17
HMGB3P26-201ENST00000560051 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
HMGB3P26-201ENST00000560051 SPTBN5Q9NRC6 3674 aaKnown RBP1.52□□□□□ -2.17
HMGB3P26-201ENST00000560051 CFAP46Q8IYW2 2715 aa1.52□□□□□ -2.17
HMGB3P26-201ENST00000560051 SETXQ7Z333 2677 aaKnown RBP1.52□□□□□ -2.17
HMGB3P26-201ENST00000560051 LRBAP50851 2863 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 COL12A1Q99715 3063 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 WDFY3Q8IZQ1 3526 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 ANK2Q01484 3957 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 NF1P21359 2839 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 CDH23Q9H251 3354 aa1.51□□□□□ -2.17
HMGB3P26-201ENST00000560051 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 KRTAP10-4P60372 401 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 LAMA3Q16787 3333 aa1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 C5orf42Q9H799 3197 aa1.5□□□□□ -2.17
HMGB3P26-201ENST00000560051 LYSTQ99698 3801 aa1.49□□□□□ -2.17
HMGB3P26-201ENST00000560051 TRIOO75962 3097 aa1.49□□□□□ -2.17
HMGB3P26-201ENST00000560051 CFAP54Q96N23 3096 aa1.49□□□□□ -2.17
HMGB3P26-201ENST00000560051 DCHS2Q6V1P9 2916 aa1.49□□□□□ -2.17
HMGB3P26-201ENST00000560051 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
HMGB3P26-201ENST00000560051 CENPEQ02224 2701 aa1.48□□□□□ -2.17
HMGB3P26-201ENST00000560051 DNAH7Q8WXX0 4024 aa1.48□□□□□ -2.17
HMGB3P26-201ENST00000560051 ZFYVE26Q68DK2 2539 aa1.47□□□□□ -2.17
HMGB3P26-201ENST00000560051 VCANP13611 3396 aa1.47□□□□□ -2.17
HMGB3P26-201ENST00000560051 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
HMGB3P26-201ENST00000560051 GCN1Q92616 2671 aaKnown RBP1.47□□□□□ -2.17
HMGB3P26-201ENST00000560051 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
HMGB3P26-201ENST00000560051 DNAH2Q9P225 4427 aa1.46□□□□□ -2.18
HMGB3P26-201ENST00000560051 ANK3Q12955 4377 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms