RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SMIM29Q86T20 159 aa3.6□□□□□ -1.83
USP3-212ENST00000559276 PRR15Q8IV56 129 aa3.6□□□□□ -1.83
USP3-212ENST00000559276 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
USP3-212ENST00000559276 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
USP3-212ENST00000559276 HIGD2AQ9BW72 106 aa3.6□□□□□ -1.83
USP3-212ENST00000559276 LINC00474Q9P2X8 69 aa3.6□□□□□ -1.83
USP3-212ENST00000559276 IGKV2-24A0A0C4DH68 120 aa3.59□□□□□ -1.83
USP3-212ENST00000559276 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
USP3-212ENST00000559276 C1orf195Q5TG92 126 aa3.59□□□□□ -1.83
USP3-212ENST00000559276 Q8N9L7 120 aa3.59□□□□□ -1.83
USP3-212ENST00000559276 MP68P56378 58 aa3.58□□□□□ -1.84
USP3-212ENST00000559276 DSCR10P59022 87 aa3.58□□□□□ -1.84
USP3-212ENST00000559276 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
USP3-212ENST00000559276 Q9BRP9 147 aa3.58□□□□□ -1.84
USP3-212ENST00000559276 FAM229BQ4G0N7 80 aa3.57□□□□□ -1.84
USP3-212ENST00000559276 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
USP3-212ENST00000559276 C1orf64Q8NEQ6 169 aa3.57□□□□□ -1.84
USP3-212ENST00000559276 DEFB105AQ8NG35 78 aa3.57□□□□□ -1.84
USP3-212ENST00000559276 MPLKIPQ8TAP9 179 aa3.57□□□□□ -1.84
USP3-212ENST00000559276 PKIGQ9Y2B9 76 aa3.57□□□□□ -1.84
USP3-212ENST00000559276 REG3GQ6UW15 175 aa3.56□□□□□ -1.84
USP3-212ENST00000559276 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
USP3-212ENST00000559276 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
USP3-212ENST00000559276 H0Y9J4 135 aa3.55□□□□□ -1.84
USP3-212ENST00000559276 K7EQZ3 153 aa3.55□□□□□ -1.84
USP3-212ENST00000559276 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
USP3-212ENST00000559276 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
USP3-212ENST00000559276 LIMD2Q9BT23 127 aa3.55□□□□□ -1.84
USP3-212ENST00000559276 MUC2Q02817 5179 aa3.54□□□□□ -1.84
USP3-212ENST00000559276 SPRR1BP22528 89 aa3.54□□□□□ -1.84
USP3-212ENST00000559276 UBE2BP63146 152 aa3.54□□□□□ -1.84
USP3-212ENST00000559276 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
USP3-212ENST00000559276 PSORS1C2Q9UIG4 136 aa3.53□□□□□ -1.84
USP3-212ENST00000559276 A8MWP4 228 aa3.52□□□□□ -1.85
USP3-212ENST00000559276 IGFL1Q6UW32 110 aa3.52□□□□□ -1.85
USP3-212ENST00000559276 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
USP3-212ENST00000559276 ST20-AS1Q8NBB2 130 aa3.52□□□□□ -1.85
USP3-212ENST00000559276 UBE2AP49459 152 aa3.51□□□□□ -1.85
USP3-212ENST00000559276 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
USP3-212ENST00000559276 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
USP3-212ENST00000559276 LINC00208Q96KT6 92 aa3.51□□□□□ -1.85
USP3-212ENST00000559276 TP53AIP1Q9HCN2 124 aa3.51□□□□□ -1.85
USP3-212ENST00000559276 FAM168BA1KXE4 195 aa3.5□□□□□ -1.85
USP3-212ENST00000559276 CASC2Q6XLA1 102 aa3.5□□□□□ -1.85
USP3-212ENST00000559276 A0A087WSZ3 146 aa3.49□□□□□ -1.85
USP3-212ENST00000559276 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
USP3-212ENST00000559276 H0Y9P7 68 aa3.49□□□□□ -1.85
USP3-212ENST00000559276 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
USP3-212ENST00000559276 MOBPQ13875 183 aa3.49□□□□□ -1.85
USP3-212ENST00000559276 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
USP3-212ENST00000559276 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
USP3-212ENST00000559276 LINC00472Q9H8W2 130 aa3.48□□□□□ -1.85
USP3-212ENST00000559276 Q5VV11 94 aa3.47□□□□□ -1.85
USP3-212ENST00000559276 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
USP3-212ENST00000559276 Q8N9P0 234 aaPredicted RBP3.47□□□□□ -1.85
USP3-212ENST00000559276 PSPHP1O15172 72 aa3.46□□□□□ -1.86
USP3-212ENST00000559276 CD164Q04900 197 aa3.46□□□□□ -1.86
USP3-212ENST00000559276 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
USP3-212ENST00000559276 ATP11AUNQ6ZP68 121 aa3.46□□□□□ -1.86
USP3-212ENST00000559276 A8MUN3 132 aa3.45□□□□□ -1.86
USP3-212ENST00000559276 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
USP3-212ENST00000559276 CHKB-CPT1BH3BT56 60 aa3.44□□□□□ -1.86
USP3-212ENST00000559276 NDUFS5O43920 106 aa3.44□□□□□ -1.86
USP3-212ENST00000559276 PRLHP81277 87 aa3.44□□□□□ -1.86
USP3-212ENST00000559276 LCE2AQ5TA79 106 aaPredicted RBP3.43□□□□□ -1.86
USP3-212ENST00000559276 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
USP3-212ENST00000559276 COA5Q86WW8 74 aa3.43□□□□□ -1.86
USP3-212ENST00000559276 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
USP3-212ENST00000559276 ZNF706Q9Y5V0 76 aaPredicted RBP3.43□□□□□ -1.86
USP3-212ENST00000559276 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
USP3-212ENST00000559276 PRR4Q16378 134 aa3.42□□□□□ -1.86
USP3-212ENST00000559276 LINC00483Q53H64 154 aa3.42□□□□□ -1.86
USP3-212ENST00000559276 KRTAP13-1Q8IUC0 172 aa3.42□□□□□ -1.86
USP3-212ENST00000559276 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
USP3-212ENST00000559276 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
USP3-212ENST00000559276 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
USP3-212ENST00000559276 A0A087X002 238 aa3.41□□□□□ -1.86
USP3-212ENST00000559276 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
USP3-212ENST00000559276 ZNF861PO60384 105 aa3.41□□□□□ -1.86
USP3-212ENST00000559276 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
USP3-212ENST00000559276 A6NED7 52 aa3.4□□□□□ -1.87
USP3-212ENST00000559276 DEFB116Q30KQ4 102 aa3.4□□□□□ -1.87
USP3-212ENST00000559276 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
USP3-212ENST00000559276 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
USP3-212ENST00000559276 IGLV9-49A0A0B4J1Y8 123 aa3.38□□□□□ -1.87
USP3-212ENST00000559276 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
USP3-212ENST00000559276 Q96NJ1 140 aa3.38□□□□□ -1.87
USP3-212ENST00000559276 MRPL34Q9BQ48 92 aaKnown RBP3.38□□□□□ -1.87
USP3-212ENST00000559276 ANAPC11Q9NYG5 84 aa3.38□□□□□ -1.87
USP3-212ENST00000559276 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
USP3-212ENST00000559276 A6NN06 94 aa3.37□□□□□ -1.87
USP3-212ENST00000559276 C8orf87E5RJ46 101 aa3.36□□□□□ -1.87
USP3-212ENST00000559276 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
USP3-212ENST00000559276 LCA10Q71F78 164 aa3.36□□□□□ -1.87
USP3-212ENST00000559276 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
USP3-212ENST00000559276 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
USP3-212ENST00000559276 HRES1P13985 223 aa3.34□□□□□ -1.87
USP3-212ENST00000559276 ACYP2P14621 99 aa3.34□□□□□ -1.87
USP3-212ENST00000559276 SPTSSBQ8NFR3 76 aa3.34□□□□□ -1.87
USP3-212ENST00000559276 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms