RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 PDE6GP18545 87 aa7.94□□□□□ -1.14
RPL28-206ENST00000558752 VPS25Q9BRG1 176 aa7.94□□□□□ -1.14
RPL28-206ENST00000558752 DSCR10P59022 87 aa7.93□□□□□ -1.14
RPL28-206ENST00000558752 J3KT08 172 aa7.92□□□□□ -1.14
RPL28-206ENST00000558752 LOC105371267A0A1B0GV96 52 aa7.9□□□□□ -1.14
RPL28-206ENST00000558752 Q6ZQT0 140 aa7.9□□□□□ -1.14
RPL28-206ENST00000558752 NAA38Q9BRA0 125 aaKnown RBP7.9□□□□□ -1.14
RPL28-206ENST00000558752 LOC110117498A0A087WWA1 95 aa7.89□□□□□ -1.15
RPL28-206ENST00000558752 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
RPL28-206ENST00000558752 DEFB116Q30KQ4 102 aa7.89□□□□□ -1.15
RPL28-206ENST00000558752 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
RPL28-206ENST00000558752 BATFQ16520 125 aa7.87□□□□□ -1.15
RPL28-206ENST00000558752 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
RPL28-206ENST00000558752 KRTAP16-1A8MUX0 517 aa7.86□□□□□ -1.15
RPL28-206ENST00000558752 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
RPL28-206ENST00000558752 NDUFB1O75438 58 aa7.85□□□□□ -1.15
RPL28-206ENST00000558752 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
RPL28-206ENST00000558752 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
RPL28-206ENST00000558752 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
RPL28-206ENST00000558752 H3BT86 120 aa7.8□□□□□ -1.16
RPL28-206ENST00000558752 TAX1BP3O14907 124 aa7.79□□□□□ -1.16
RPL28-206ENST00000558752 C14orf132Q9NPU4 83 aa7.79□□□□□ -1.16
RPL28-206ENST00000558752 A8MWP4 228 aa7.77□□□□□ -1.17
RPL28-206ENST00000558752 NREPQ16612 68 aa7.77□□□□□ -1.17
RPL28-206ENST00000558752 KRTAP9-8Q9BYQ0 159 aa7.76□□□□□ -1.17
RPL28-206ENST00000558752 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
RPL28-206ENST00000558752 FAM236DA0A1B0GTK5 79 aa7.71□□□□□ -1.18
RPL28-206ENST00000558752 FAM236CP0DP71 79 aa7.71□□□□□ -1.18
RPL28-206ENST00000558752 C8orf17Q9NRJ1 99 aa7.71□□□□□ -1.18
RPL28-206ENST00000558752 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
RPL28-206ENST00000558752 SYNE2Q8WXH0 6885 aaKnown RBP7.71□□□□□ -1.18
RPL28-206ENST00000558752 IGKV3D-7A0A0C4DH55 119 aa7.7□□□□□ -1.18
RPL28-206ENST00000558752 PRR15Q8IV56 129 aa7.7□□□□□ -1.18
RPL28-206ENST00000558752 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
RPL28-206ENST00000558752 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
RPL28-206ENST00000558752 SPCS1Q9Y6A9 102 aa7.69□□□□□ -1.18
RPL28-206ENST00000558752 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
RPL28-206ENST00000558752 Q6ZVQ6 151 aa7.67□□□□□ -1.18
RPL28-206ENST00000558752 MPLKIPQ8TAP9 179 aa7.67□□□□□ -1.18
RPL28-206ENST00000558752 HRES1P13985 223 aa7.65□□□□□ -1.18
RPL28-206ENST00000558752 MTURNQ8N3F0 131 aa7.65□□□□□ -1.18
RPL28-206ENST00000558752 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
RPL28-206ENST00000558752 MACF1Q9UPN3 7388 aaKnown RBP7.63□□□□□ -1.19
RPL28-206ENST00000558752 SPINK7P58062 85 aa7.63□□□□□ -1.19
RPL28-206ENST00000558752 BPY2O14599 106 aa7.62□□□□□ -1.19
RPL28-206ENST00000558752 MT2AP02795 61 aa7.62□□□□□ -1.19
RPL28-206ENST00000558752 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
RPL28-206ENST00000558752 LCE2BO14633 110 aa7.61□□□□□ -1.19
RPL28-206ENST00000558752 MRPL34Q9BQ48 92 aaKnown RBP7.61□□□□□ -1.19
RPL28-206ENST00000558752 hDV103S1A0JD37 113 aa7.59□□□□□ -1.19
RPL28-206ENST00000558752 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
RPL28-206ENST00000558752 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
RPL28-206ENST00000558752 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
RPL28-206ENST00000558752 K7EP34 96 aa7.56□□□□□ -1.2
RPL28-206ENST00000558752 K7EQZ3 153 aa7.56□□□□□ -1.2
RPL28-206ENST00000558752 MT1FP04733 61 aa7.55□□□□□ -1.2
RPL28-206ENST00000558752 PRO0461Q9UI25 63 aa7.55□□□□□ -1.2
RPL28-206ENST00000558752 GTF2H5Q6ZYL4 71 aa7.54□□□□□ -1.2
RPL28-206ENST00000558752 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
RPL28-206ENST00000558752 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
RPL28-206ENST00000558752 NDUFS5O43920 106 aa7.51□□□□□ -1.21
RPL28-206ENST00000558752 WFDC13Q8IUB5 93 aa7.51□□□□□ -1.21
RPL28-206ENST00000558752 F8W1H4 67 aa7.5□□□□□ -1.21
RPL28-206ENST00000558752 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
RPL28-206ENST00000558752 PCP4L1A6NKN8 68 aa7.44□□□□□ -1.22
RPL28-206ENST00000558752 Q8N9L7 120 aa7.44□□□□□ -1.22
RPL28-206ENST00000558752 CXCL6P80162 114 aa7.43□□□□□ -1.22
RPL28-206ENST00000558752 HCG22E2RYF7 251 aa7.41□□□□□ -1.22
RPL28-206ENST00000558752 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
RPL28-206ENST00000558752 Q5W150 140 aa7.4□□□□□ -1.22
RPL28-206ENST00000558752 C7orf65Q6ZTY9 151 aa7.4□□□□□ -1.22
RPL28-206ENST00000558752 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
RPL28-206ENST00000558752 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
RPL28-206ENST00000558752 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
RPL28-206ENST00000558752 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
RPL28-206ENST00000558752 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
RPL28-206ENST00000558752 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
RPL28-206ENST00000558752 ACYP1P07311 99 aa7.32□□□□□ -1.24
RPL28-206ENST00000558752 NEBP20929 6669 aa7.26□□□□□ -1.25
RPL28-206ENST00000558752 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
RPL28-206ENST00000558752 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
RPL28-206ENST00000558752 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.26
RPL28-206ENST00000558752 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.26
RPL28-206ENST00000558752 MUC12Q9UKN1 5478 aa7.14□□□□□ -1.27
RPL28-206ENST00000558752 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
RPL28-206ENST00000558752 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
RPL28-206ENST00000558752 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
RPL28-206ENST00000558752 HIST1H4AP62805 103 aaKnown RBP7.11□□□□□ -1.27
RPL28-206ENST00000558752 LINC00643Q86TS7 51 aa7.11□□□□□ -1.27
RPL28-206ENST00000558752 LOC101927531A0A1B0GV80 90 aa7.1□□□□□ -1.27
RPL28-206ENST00000558752 UQCRQO14949 82 aa7.09□□□□□ -1.27
RPL28-206ENST00000558752 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
RPL28-206ENST00000558752 S4R3F8 94 aa7.09□□□□□ -1.27
RPL28-206ENST00000558752 ATOX1O00244 68 aa7.07□□□□□ -1.28
RPL28-206ENST00000558752 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
RPL28-206ENST00000558752 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
RPL28-206ENST00000558752 A0A1B0GV90 55 aa7.03□□□□□ -1.28
RPL28-206ENST00000558752 LCA10Q71F78 164 aa7.02□□□□□ -1.29
RPL28-206ENST00000558752 J3QR89 54 aa7.01□□□□□ -1.29
RPL28-206ENST00000558752 A6NN06 94 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms