RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
INO80-205ENST00000558357 LAMA5O15230 3695 aa6.65□□□□□ -1.34
INO80-205ENST00000558357 KRTAP4-16G5E9R7 235 aaPredicted RBP6.64□□□□□ -1.35
INO80-205ENST00000558357 KRTAP10-2P60368 255 aa6.64□□□□□ -1.35
INO80-205ENST00000558357 UTP20O75691 2785 aaKnown RBP6.63□□□□□ -1.35
INO80-205ENST00000558357 LCE6AA0A183 80 aa6.62□□□□□ -1.35
INO80-205ENST00000558357 PANO1I0J062 215 aa6.62□□□□□ -1.35
INO80-205ENST00000558357 CRYBG3Q68DQ2 2970 aa6.6□□□□□ -1.35
INO80-205ENST00000558357 UBR5O95071 2799 aaPredicted RBP6.59□□□□□ -1.35
INO80-205ENST00000558357 WDFY3Q8IZQ1 3526 aa6.59□□□□□ -1.35
INO80-205ENST00000558357 RELNP78509 3460 aa6.56□□□□□ -1.36
INO80-205ENST00000558357 ZANQ9Y493 2812 aa6.56□□□□□ -1.36
INO80-205ENST00000558357 APCP25054 2843 aa6.55□□□□□ -1.36
INO80-205ENST00000558357 A0A087X002 238 aa6.55□□□□□ -1.36
INO80-205ENST00000558357 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
INO80-205ENST00000558357 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
INO80-205ENST00000558357 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
INO80-205ENST00000558357 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
INO80-205ENST00000558357 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
INO80-205ENST00000558357 HIVEP1P15822 2718 aa6.5□□□□□ -1.37
INO80-205ENST00000558357 NBEAL2Q6ZNJ1 2754 aa6.5□□□□□ -1.37
INO80-205ENST00000558357 A6NN06 94 aa6.49□□□□□ -1.37
INO80-205ENST00000558357 DCHS2Q6V1P9 2916 aa6.48□□□□□ -1.37
INO80-205ENST00000558357 HRNRQ86YZ3 2850 aaPredicted RBP6.46□□□□□ -1.38
INO80-205ENST00000558357 A8MUU9 505 aa6.45□□□□□ -1.38
INO80-205ENST00000558357 A8MU10 97 aa6.45□□□□□ -1.38
INO80-205ENST00000558357 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
INO80-205ENST00000558357 NSD1Q96L73 2696 aaPredicted RBP6.43□□□□□ -1.38
INO80-205ENST00000558357 NIPBLQ6KC79 2804 aaeCLIP6.42□□□□□ -1.38
INO80-205ENST00000558357 ASH1LQ9NR48 2969 aaKnown RBP6.4□□□□□ -1.38
INO80-205ENST00000558357 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.39
INO80-205ENST00000558357 NF1P21359 2839 aa6.39□□□□□ -1.39
INO80-205ENST00000558357 ZFHX4Q86UP3 3567 aa6.39□□□□□ -1.39
INO80-205ENST00000558357 SMG1Q96Q15 3661 aaKnown RBP6.38□□□□□ -1.39
INO80-205ENST00000558357 Q6ZRN7 208 aaPredicted RBP6.36□□□□□ -1.39
INO80-205ENST00000558357 TENM4Q6N022 2769 aa6.35□□□□□ -1.39
INO80-205ENST00000558357 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
INO80-205ENST00000558357 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
INO80-205ENST00000558357 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
INO80-205ENST00000558357 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
INO80-205ENST00000558357 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
INO80-205ENST00000558357 TNP1P09430 55 aa6.31□□□□□ -1.4
INO80-205ENST00000558357 FBN2P35556 2912 aa6.3□□□□□ -1.4
INO80-205ENST00000558357 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
INO80-205ENST00000558357 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
INO80-205ENST00000558357 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
INO80-205ENST00000558357 CELSR1Q9NYQ6 3014 aa6.13□□□□□ -1.43
INO80-205ENST00000558357 OTOGQ6ZRI0 2925 aa6.13□□□□□ -1.43
INO80-205ENST00000558357 PDZD2O15018 2839 aa6.11□□□□□ -1.43
INO80-205ENST00000558357 SPENQ96T58 3664 aaKnown RBP6.1□□□□□ -1.43
INO80-205ENST00000558357 NBPF19A0A087WUL8 3843 aa6.09□□□□□ -1.43
INO80-205ENST00000558357 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
INO80-205ENST00000558357 ZFHX3Q15911 3703 aa6.06□□□□□ -1.44
INO80-205ENST00000558357 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
INO80-205ENST00000558357 TENM1Q9UKZ4 2725 aa6.04□□□□□ -1.44
INO80-205ENST00000558357 CSMD2Q7Z408 3487 aa6.03□□□□□ -1.44
INO80-205ENST00000558357 BSNQ9UPA5 3926 aa6.02□□□□□ -1.45
INO80-205ENST00000558357 XP32Q5T750 250 aa6.02□□□□□ -1.45
INO80-205ENST00000558357 SVEP1Q4LDE5 3571 aa6.01□□□□□ -1.45
INO80-205ENST00000558357 P0C880 135 aa6□□□□□ -1.45
INO80-205ENST00000558357 H0YAA0 97 aa5.99□□□□□ -1.45
INO80-205ENST00000558357 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
INO80-205ENST00000558357 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
INO80-205ENST00000558357 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
INO80-205ENST00000558357 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
INO80-205ENST00000558357 VWFP04275 2813 aa5.94□□□□□ -1.46
INO80-205ENST00000558357 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
INO80-205ENST00000558357 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
INO80-205ENST00000558357 CUBNO60494 3623 aa5.87□□□□□ -1.47
INO80-205ENST00000558357 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
INO80-205ENST00000558357 TENM3Q9P273 2699 aa5.85□□□□□ -1.47
INO80-205ENST00000558357 PKD1L1Q8TDX9 2849 aa5.82□□□□□ -1.48
INO80-205ENST00000558357 TGP01266 2768 aa5.78□□□□□ -1.48
INO80-205ENST00000558357 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
INO80-205ENST00000558357 VPS13CQ709C8 3753 aa5.7□□□□□ -1.5
INO80-205ENST00000558357 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
INO80-205ENST00000558357 TRRAPQ9Y4A5 3859 aa5.67□□□□□ -1.5
INO80-205ENST00000558357 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
INO80-205ENST00000558357 ZNF469Q96JG9 3925 aaPredicted RBP5.63□□□□□ -1.51
INO80-205ENST00000558357 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
INO80-205ENST00000558357 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
INO80-205ENST00000558357 SRRM2Q9UQ35 2752 aaKnown RBP5.52□□□□□ -1.53
INO80-205ENST00000558357 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
INO80-205ENST00000558357 FBN3Q75N90 2809 aa5.5□□□□□ -1.53
INO80-205ENST00000558357 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
INO80-205ENST00000558357 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
INO80-205ENST00000558357 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
INO80-205ENST00000558357 COL7A1Q02388 2944 aa5.37□□□□□ -1.55
INO80-205ENST00000558357 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
INO80-205ENST00000558357 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
INO80-205ENST00000558357 INE1O15225 51 aa5.24□□□□□ -1.57
INO80-205ENST00000558357 DNHD1Q96M86 4753 aa5.2□□□□□ -1.58
INO80-205ENST00000558357 HUWE1Q7Z6Z7 4374 aaKnown RBP5.13□□□□□ -1.59
INO80-205ENST00000558357 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
INO80-205ENST00000558357 DNAH9Q9NYC9 4486 aa5.05□□□□□ -1.6
INO80-205ENST00000558357 KRTAP3-2Q9BYR7 98 aa5.05□□□□□ -1.6
INO80-205ENST00000558357 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
INO80-205ENST00000558357 CSMD3Q7Z407 3707 aa5.03□□□□□ -1.6
INO80-205ENST00000558357 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
INO80-205ENST00000558357 MT1HL1P0DM35 61 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms