RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
LHX4-202ENST00000558139 C12orf57Q99622 126 aa7.75□□□□□ -1.17
LHX4-202ENST00000558139 NDUFV3P56181 108 aaKnown RBP7.74□□□□□ -1.17
LHX4-202ENST00000558139 DEFB116Q30KQ4 102 aa7.74□□□□□ -1.17
LHX4-202ENST00000558139 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
LHX4-202ENST00000558139 PET117Q6UWS5 81 aa7.72□□□□□ -1.17
LHX4-202ENST00000558139 SYS1-DBNDD2H3BUS1 97 aa7.71□□□□□ -1.18
LHX4-202ENST00000558139 SMIM6P0DI80 62 aa7.7□□□□□ -1.18
LHX4-202ENST00000558139 LCE3BQ5TA77 95 aa7.7□□□□□ -1.18
LHX4-202ENST00000558139 H3BMG7 143 aa7.69□□□□□ -1.18
LHX4-202ENST00000558139 KRTDAPP60985 99 aa7.69□□□□□ -1.18
LHX4-202ENST00000558139 LINC01545Q5VT33 79 aa7.68□□□□□ -1.18
LHX4-202ENST00000558139 LINC00472Q9H8W2 130 aa7.68□□□□□ -1.18
LHX4-202ENST00000558139 BVES-AS1Q5T3Y7 98 aa7.67□□□□□ -1.18
LHX4-202ENST00000558139 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
LHX4-202ENST00000558139 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
LHX4-202ENST00000558139 RAB37Q96AX2 223 aa7.67□□□□□ -1.18
LHX4-202ENST00000558139 PYY3Q5JQD4 70 aa7.66□□□□□ -1.18
LHX4-202ENST00000558139 A0A1B0GVX0 72 aa7.65□□□□□ -1.18
LHX4-202ENST00000558139 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
LHX4-202ENST00000558139 DSCR8Q96T75 97 aa7.64□□□□□ -1.19
LHX4-202ENST00000558139 TRBV7-4A0A0J9YYF1 115 aa7.62□□□□□ -1.19
LHX4-202ENST00000558139 SNCGO76070 127 aa7.62□□□□□ -1.19
LHX4-202ENST00000558139 DSTQ03001 7570 aaKnown RBP7.58□□□□□ -1.2
LHX4-202ENST00000558139 HSBP1L1C9JCN9 74 aa7.58□□□□□ -1.2
LHX4-202ENST00000558139 VAMP8Q9BV40 100 aa7.58□□□□□ -1.2
LHX4-202ENST00000558139 IGKV3D-7A0A0C4DH55 119 aa7.57□□□□□ -1.2
LHX4-202ENST00000558139 FABP2P12104 132 aa7.55□□□□□ -1.2
LHX4-202ENST00000558139 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
LHX4-202ENST00000558139 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
LHX4-202ENST00000558139 ANKRD29Q8N6D5 301 aa7.55□□□□□ -1.2
LHX4-202ENST00000558139 ATOH7Q8N100 152 aa7.53□□□□□ -1.2
LHX4-202ENST00000558139 SPATA45Q537H7 98 aa7.52□□□□□ -1.21
LHX4-202ENST00000558139 PAM16Q9Y3D7 125 aa7.51□□□□□ -1.21
LHX4-202ENST00000558139 TSTD3H0UI37 97 aa7.5□□□□□ -1.21
LHX4-202ENST00000558139 DLEU1O43261 78 aa7.5□□□□□ -1.21
LHX4-202ENST00000558139 COX8AP10176 69 aa7.49□□□□□ -1.21
LHX4-202ENST00000558139 TRACP01848 142 aa7.48□□□□□ -1.21
LHX4-202ENST00000558139 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
LHX4-202ENST00000558139 KLKP1Q107X0 134 aa7.47□□□□□ -1.21
LHX4-202ENST00000558139 H0YGX0 51 aa7.45□□□□□ -1.22
LHX4-202ENST00000558139 CCKP06307 115 aa7.45□□□□□ -1.22
LHX4-202ENST00000558139 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
LHX4-202ENST00000558139 J3KT08 172 aa7.43□□□□□ -1.22
LHX4-202ENST00000558139 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
LHX4-202ENST00000558139 NDUFB1O75438 58 aa7.42□□□□□ -1.22
LHX4-202ENST00000558139 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
LHX4-202ENST00000558139 C14orf144Q96I85 54 aa7.42□□□□□ -1.22
LHX4-202ENST00000558139 KRTAP4-9Q9BYQ8 210 aa7.42□□□□□ -1.22
LHX4-202ENST00000558139 A0A1B0GV72 72 aa7.41□□□□□ -1.22
LHX4-202ENST00000558139 C2orf91Q6ZV80 131 aa7.38□□□□□ -1.23
LHX4-202ENST00000558139 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
LHX4-202ENST00000558139 A0A1B0GX51 115 aa7.36□□□□□ -1.23
LHX4-202ENST00000558139 PRR15Q8IV56 129 aa7.36□□□□□ -1.23
LHX4-202ENST00000558139 HSD52Q0P140 79 aa7.35□□□□□ -1.23
LHX4-202ENST00000558139 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
LHX4-202ENST00000558139 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
LHX4-202ENST00000558139 Q6ZVQ6 151 aa7.34□□□□□ -1.23
LHX4-202ENST00000558139 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
LHX4-202ENST00000558139 M0R143 59 aa7.33□□□□□ -1.24
LHX4-202ENST00000558139 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
LHX4-202ENST00000558139 PCP4L1A6NKN8 68 aa7.31□□□□□ -1.24
LHX4-202ENST00000558139 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
LHX4-202ENST00000558139 VPS25Q9BRG1 176 aa7.31□□□□□ -1.24
LHX4-202ENST00000558139 S4R3F8 94 aa7.31□□□□□ -1.24
LHX4-202ENST00000558139 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
LHX4-202ENST00000558139 MT1XP80297 61 aa7.3□□□□□ -1.24
LHX4-202ENST00000558139 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
LHX4-202ENST00000558139 HIST1H4GQ99525 98 aa7.3□□□□□ -1.24
LHX4-202ENST00000558139 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
LHX4-202ENST00000558139 LCA10Q71F78 164 aa7.29□□□□□ -1.24
LHX4-202ENST00000558139 CEND1Q8N111 149 aa7.28□□□□□ -1.24
LHX4-202ENST00000558139 H3BQ85 93 aa7.27□□□□□ -1.25
LHX4-202ENST00000558139 ORMDL1Q9P0S3 153 aa7.25□□□□□ -1.25
LHX4-202ENST00000558139 TMEM256-PLSCR3K7ERE1 68 aa7.23□□□□□ -1.25
LHX4-202ENST00000558139 FXYD2P54710 66 aa7.22□□□□□ -1.25
LHX4-202ENST00000558139 MRPL34Q9BQ48 92 aaKnown RBP7.22□□□□□ -1.25
LHX4-202ENST00000558139 A0A0B4J2C4 111 aa7.21□□□□□ -1.26
LHX4-202ENST00000558139 DNAL4O96015 105 aa7.21□□□□□ -1.26
LHX4-202ENST00000558139 NDUFS5O43920 106 aa7.2□□□□□ -1.26
LHX4-202ENST00000558139 RBM3P98179 157 aaKnown RBP7.2□□□□□ -1.26
LHX4-202ENST00000558139 COL5A1-AS1Q5SY13 56 aa7.2□□□□□ -1.26
LHX4-202ENST00000558139 BATFQ16520 125 aa7.18□□□□□ -1.26
LHX4-202ENST00000558139 TMEM254Q8TBM7 123 aa7.18□□□□□ -1.26
LHX4-202ENST00000558139 Q6ZQT0 140 aa7.17□□□□□ -1.26
LHX4-202ENST00000558139 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
LHX4-202ENST00000558139 HMCN1Q96RW7 5635 aa7.14□□□□□ -1.27
LHX4-202ENST00000558139 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
LHX4-202ENST00000558139 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
LHX4-202ENST00000558139 UBE2V1Q13404 147 aa7.13□□□□□ -1.27
LHX4-202ENST00000558139 TAX1BP3O14907 124 aa7.12□□□□□ -1.27
LHX4-202ENST00000558139 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
LHX4-202ENST00000558139 Q5W150 140 aa7.12□□□□□ -1.27
LHX4-202ENST00000558139 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
LHX4-202ENST00000558139 K7ERJ3 54 aa7.11□□□□□ -1.27
LHX4-202ENST00000558139 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
LHX4-202ENST00000558139 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
LHX4-202ENST00000558139 KRTAP5-10Q6L8G5 202 aa7.09□□□□□ -1.27
LHX4-202ENST00000558139 hDV103S1A0JD37 113 aa7.08□□□□□ -1.28
LHX4-202ENST00000558139 K7EQZ3 153 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms