RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
SNRPA1-204ENST00000558020 MTURNQ8N3F0 131 aa6.83□□□□□ -1.32
SNRPA1-204ENST00000558020 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
SNRPA1-204ENST00000558020 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
SNRPA1-204ENST00000558020 C8orf87E5RJ46 101 aa6.81□□□□□ -1.32
SNRPA1-204ENST00000558020 RBM3P98179 157 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-204ENST00000558020 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
SNRPA1-204ENST00000558020 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
SNRPA1-204ENST00000558020 BATFQ16520 125 aa6.8□□□□□ -1.32
SNRPA1-204ENST00000558020 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
SNRPA1-204ENST00000558020 HRES1P13985 223 aa6.79□□□□□ -1.32
SNRPA1-204ENST00000558020 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
SNRPA1-204ENST00000558020 J3KT08 172 aa6.78□□□□□ -1.32
SNRPA1-204ENST00000558020 LYRM7Q5U5X0 104 aa6.78□□□□□ -1.32
SNRPA1-204ENST00000558020 MT2AP02795 61 aa6.77□□□□□ -1.33
SNRPA1-204ENST00000558020 C9JAW5 83 aa6.76□□□□□ -1.33
SNRPA1-204ENST00000558020 ATXN8Q156A1 80 aa6.76□□□□□ -1.33
SNRPA1-204ENST00000558020 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-204ENST00000558020 NDUFB1O75438 58 aa6.75□□□□□ -1.33
SNRPA1-204ENST00000558020 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
SNRPA1-204ENST00000558020 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
SNRPA1-204ENST00000558020 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
SNRPA1-204ENST00000558020 USH2AO75445 5202 aa6.73□□□□□ -1.33
SNRPA1-204ENST00000558020 BAALC-AS2P0C853 105 aa6.73□□□□□ -1.33
SNRPA1-204ENST00000558020 KRTAP9-7A8MTY7 169 aa6.72□□□□□ -1.33
SNRPA1-204ENST00000558020 SPINK7P58062 85 aa6.72□□□□□ -1.33
SNRPA1-204ENST00000558020 Q6ZQT0 140 aa6.71□□□□□ -1.34
SNRPA1-204ENST00000558020 MT1FP04733 61 aa6.7□□□□□ -1.34
SNRPA1-204ENST00000558020 A0A1B0GW54 56 aa6.69□□□□□ -1.34
SNRPA1-204ENST00000558020 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
SNRPA1-204ENST00000558020 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
SNRPA1-204ENST00000558020 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
SNRPA1-204ENST00000558020 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-204ENST00000558020 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
SNRPA1-204ENST00000558020 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
SNRPA1-204ENST00000558020 PDE6GP18545 87 aa6.66□□□□□ -1.34
SNRPA1-204ENST00000558020 LINC00846Q9NV44 126 aa6.66□□□□□ -1.34
SNRPA1-204ENST00000558020 A0A1W2PPM0 123 aa6.65□□□□□ -1.34
SNRPA1-204ENST00000558020 A8MWP4 228 aa6.65□□□□□ -1.34
SNRPA1-204ENST00000558020 COL5A1-AS1Q5SY13 56 aa6.63□□□□□ -1.35
SNRPA1-204ENST00000558020 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
SNRPA1-204ENST00000558020 C8orf17Q9NRJ1 99 aa6.63□□□□□ -1.35
SNRPA1-204ENST00000558020 LOC110117498A0A087WWA1 95 aa6.62□□□□□ -1.35
SNRPA1-204ENST00000558020 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
SNRPA1-204ENST00000558020 WFDC13Q8IUB5 93 aa6.61□□□□□ -1.35
SNRPA1-204ENST00000558020 Q6ZVQ6 151 aa6.6□□□□□ -1.35
SNRPA1-204ENST00000558020 IGKV3D-7A0A0C4DH55 119 aa6.59□□□□□ -1.35
SNRPA1-204ENST00000558020 PCP4L1A6NKN8 68 aa6.59□□□□□ -1.35
SNRPA1-204ENST00000558020 H3BT86 120 aa6.59□□□□□ -1.35
SNRPA1-204ENST00000558020 NREPQ16612 68 aa6.58□□□□□ -1.36
SNRPA1-204ENST00000558020 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
SNRPA1-204ENST00000558020 PRR15Q8IV56 129 aa6.57□□□□□ -1.36
SNRPA1-204ENST00000558020 C14orf132Q9NPU4 83 aa6.56□□□□□ -1.36
SNRPA1-204ENST00000558020 TMEM254Q8TBM7 123 aa6.53□□□□□ -1.36
SNRPA1-204ENST00000558020 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-204ENST00000558020 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
SNRPA1-204ENST00000558020 K7EP34 96 aa6.5□□□□□ -1.37
SNRPA1-204ENST00000558020 NDUFS5O43920 106 aa6.5□□□□□ -1.37
SNRPA1-204ENST00000558020 hDV103S1A0JD37 113 aa6.49□□□□□ -1.37
SNRPA1-204ENST00000558020 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
SNRPA1-204ENST00000558020 GTF2H5Q6ZYL4 71 aa6.49□□□□□ -1.37
SNRPA1-204ENST00000558020 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
SNRPA1-204ENST00000558020 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-204ENST00000558020 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
SNRPA1-204ENST00000558020 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
SNRPA1-204ENST00000558020 K7EQZ3 153 aa6.44□□□□□ -1.38
SNRPA1-204ENST00000558020 BPY2O14599 106 aa6.44□□□□□ -1.38
SNRPA1-204ENST00000558020 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
SNRPA1-204ENST00000558020 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
SNRPA1-204ENST00000558020 C7orf65Q6ZTY9 151 aa6.42□□□□□ -1.38
SNRPA1-204ENST00000558020 PRO0461Q9UI25 63 aa6.42□□□□□ -1.38
SNRPA1-204ENST00000558020 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.39
SNRPA1-204ENST00000558020 F8W1H4 67 aa6.39□□□□□ -1.39
SNRPA1-204ENST00000558020 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
SNRPA1-204ENST00000558020 Q5W150 140 aa6.36□□□□□ -1.39
SNRPA1-204ENST00000558020 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
SNRPA1-204ENST00000558020 CXCL6P80162 114 aa6.34□□□□□ -1.39
SNRPA1-204ENST00000558020 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
SNRPA1-204ENST00000558020 C4orf26Q17RF5 130 aa6.33□□□□□ -1.4
SNRPA1-204ENST00000558020 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
SNRPA1-204ENST00000558020 H3BS24 57 aa6.32□□□□□ -1.4
SNRPA1-204ENST00000558020 Q8N9L7 120 aa6.31□□□□□ -1.4
SNRPA1-204ENST00000558020 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
SNRPA1-204ENST00000558020 FAM236AA0A1B0GUQ0 79 aa6.27□□□□□ -1.41
SNRPA1-204ENST00000558020 FAM236BA0A1B0GV22 79 aa6.27□□□□□ -1.41
SNRPA1-204ENST00000558020 C5orf47Q569G3 176 aa6.27□□□□□ -1.41
SNRPA1-204ENST00000558020 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
SNRPA1-204ENST00000558020 S4R3F8 94 aa6.22□□□□□ -1.41
SNRPA1-204ENST00000558020 A0A1B0GV90 55 aa6.21□□□□□ -1.42
SNRPA1-204ENST00000558020 ACYP1P07311 99 aa6.21□□□□□ -1.42
SNRPA1-204ENST00000558020 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
SNRPA1-204ENST00000558020 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
SNRPA1-204ENST00000558020 A6NN06 94 aa6.18□□□□□ -1.42
SNRPA1-204ENST00000558020 Q5VV11 94 aa6.18□□□□□ -1.42
SNRPA1-204ENST00000558020 FAM240AA0A1B0GVK7 77 aa6.17□□□□□ -1.42
SNRPA1-204ENST00000558020 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
SNRPA1-204ENST00000558020 LCA10Q71F78 164 aa6.15□□□□□ -1.42
SNRPA1-204ENST00000558020 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
SNRPA1-204ENST00000558020 ATP5EP2Q5VTU8 51 aa6.13□□□□□ -1.43
SNRPA1-204ENST00000558020 MT1BP07438 61 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms