RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 A0A1B0GVX0 72 aa7.95□□□□□ -1.14
VIPAS39-210ENST00000557466 NREPQ16612 68 aa7.95□□□□□ -1.14
VIPAS39-210ENST00000557466 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
VIPAS39-210ENST00000557466 LINC00313P59037 77 aa7.94□□□□□ -1.14
VIPAS39-210ENST00000557466 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
VIPAS39-210ENST00000557466 A0A1B0GV90 55 aa7.93□□□□□ -1.14
VIPAS39-210ENST00000557466 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
VIPAS39-210ENST00000557466 Q75L30 129 aa7.93□□□□□ -1.14
VIPAS39-210ENST00000557466 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
VIPAS39-210ENST00000557466 A8MUU9 505 aa7.91□□□□□ -1.14
VIPAS39-210ENST00000557466 A8MWP4 228 aa7.91□□□□□ -1.14
VIPAS39-210ENST00000557466 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
VIPAS39-210ENST00000557466 Q6ZVQ6 151 aa7.9□□□□□ -1.14
VIPAS39-210ENST00000557466 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
VIPAS39-210ENST00000557466 NDUFB1O75438 58 aa7.89□□□□□ -1.15
VIPAS39-210ENST00000557466 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
VIPAS39-210ENST00000557466 ATP11AUNQ6ZP68 121 aa7.85□□□□□ -1.15
VIPAS39-210ENST00000557466 PRR15Q8IV56 129 aa7.85□□□□□ -1.15
VIPAS39-210ENST00000557466 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
VIPAS39-210ENST00000557466 BPY2O14599 106 aa7.84□□□□□ -1.15
VIPAS39-210ENST00000557466 K7EQZ3 153 aa7.83□□□□□ -1.16
VIPAS39-210ENST00000557466 UBL5Q9BZL1 73 aa7.83□□□□□ -1.16
VIPAS39-210ENST00000557466 MUC2Q02817 5179 aa7.83□□□□□ -1.16
VIPAS39-210ENST00000557466 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
VIPAS39-210ENST00000557466 MMP24-AS1A0A0U1RRL7 71 aa7.8□□□□□ -1.16
VIPAS39-210ENST00000557466 Q8N9L7 120 aa7.78□□□□□ -1.16
VIPAS39-210ENST00000557466 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
VIPAS39-210ENST00000557466 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
VIPAS39-210ENST00000557466 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
VIPAS39-210ENST00000557466 FAM240AA0A1B0GVK7 77 aa7.72□□□□□ -1.17
VIPAS39-210ENST00000557466 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
VIPAS39-210ENST00000557466 ACYP1P07311 99 aa7.72□□□□□ -1.17
VIPAS39-210ENST00000557466 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
VIPAS39-210ENST00000557466 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
VIPAS39-210ENST00000557466 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
VIPAS39-210ENST00000557466 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
VIPAS39-210ENST00000557466 CXCL6P80162 114 aa7.68□□□□□ -1.18
VIPAS39-210ENST00000557466 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
VIPAS39-210ENST00000557466 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
VIPAS39-210ENST00000557466 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
VIPAS39-210ENST00000557466 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
VIPAS39-210ENST00000557466 NDUFS5O43920 106 aa7.65□□□□□ -1.18
VIPAS39-210ENST00000557466 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
VIPAS39-210ENST00000557466 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
VIPAS39-210ENST00000557466 HRES1P13985 223 aa7.59□□□□□ -1.19
VIPAS39-210ENST00000557466 SPINK7P58062 85 aa7.57□□□□□ -1.2
VIPAS39-210ENST00000557466 MT1HP80294 61 aa7.57□□□□□ -1.2
VIPAS39-210ENST00000557466 J3QR89 54 aa7.56□□□□□ -1.2
VIPAS39-210ENST00000557466 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
VIPAS39-210ENST00000557466 Q5W150 140 aa7.55□□□□□ -1.2
VIPAS39-210ENST00000557466 MPLKIPQ8TAP9 179 aa7.54□□□□□ -1.2
VIPAS39-210ENST00000557466 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
VIPAS39-210ENST00000557466 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
VIPAS39-210ENST00000557466 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
VIPAS39-210ENST00000557466 FAM236DA0A1B0GTK5 79 aa7.48□□□□□ -1.21
VIPAS39-210ENST00000557466 FAM236CP0DP71 79 aa7.48□□□□□ -1.21
VIPAS39-210ENST00000557466 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
VIPAS39-210ENST00000557466 A0A087WVE0 104 aa7.47□□□□□ -1.21
VIPAS39-210ENST00000557466 IGKV2-30P06310 120 aa7.47□□□□□ -1.21
VIPAS39-210ENST00000557466 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
VIPAS39-210ENST00000557466 C7orf65Q6ZTY9 151 aa7.45□□□□□ -1.22
VIPAS39-210ENST00000557466 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
VIPAS39-210ENST00000557466 K7ERU9 68 aa7.42□□□□□ -1.22
VIPAS39-210ENST00000557466 M0R2T5 61 aa7.42□□□□□ -1.22
VIPAS39-210ENST00000557466 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
VIPAS39-210ENST00000557466 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
VIPAS39-210ENST00000557466 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
VIPAS39-210ENST00000557466 UQCRQO14949 82 aa7.34□□□□□ -1.23
VIPAS39-210ENST00000557466 MT-ATP8P03928 68 aa7.32□□□□□ -1.24
VIPAS39-210ENST00000557466 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
VIPAS39-210ENST00000557466 H0Y9P7 68 aa7.29□□□□□ -1.24
VIPAS39-210ENST00000557466 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
VIPAS39-210ENST00000557466 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
VIPAS39-210ENST00000557466 CYP4F30PQ9H0H9 118 aa7.28□□□□□ -1.24
VIPAS39-210ENST00000557466 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.25
VIPAS39-210ENST00000557466 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
VIPAS39-210ENST00000557466 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
VIPAS39-210ENST00000557466 ATOX1O00244 68 aa7.25□□□□□ -1.25
VIPAS39-210ENST00000557466 SCGB1A1P11684 91 aa7.22□□□□□ -1.25
VIPAS39-210ENST00000557466 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
VIPAS39-210ENST00000557466 C1orf64Q8NEQ6 169 aa7.2□□□□□ -1.26
VIPAS39-210ENST00000557466 LINC00208Q96KT6 92 aa7.2□□□□□ -1.26
VIPAS39-210ENST00000557466 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
VIPAS39-210ENST00000557466 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
VIPAS39-210ENST00000557466 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
VIPAS39-210ENST00000557466 MP68P56378 58 aa7.18□□□□□ -1.26
VIPAS39-210ENST00000557466 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
VIPAS39-210ENST00000557466 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
VIPAS39-210ENST00000557466 MT2AP02795 61 aa7.14□□□□□ -1.27
VIPAS39-210ENST00000557466 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
VIPAS39-210ENST00000557466 H3BPC8 53 aa7.12□□□□□ -1.27
VIPAS39-210ENST00000557466 S4R3F8 94 aa7.1□□□□□ -1.27
VIPAS39-210ENST00000557466 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.27
VIPAS39-210ENST00000557466 MT1FP04733 61 aa7.09□□□□□ -1.27
VIPAS39-210ENST00000557466 SMIM20Q8N5G0 67 aa7.09□□□□□ -1.27
VIPAS39-210ENST00000557466 LCA10Q71F78 164 aa7.06□□□□□ -1.28
VIPAS39-210ENST00000557466 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
VIPAS39-210ENST00000557466 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
VIPAS39-210ENST00000557466 A8MUN3 132 aa7□□□□□ -1.29
VIPAS39-210ENST00000557466 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms