RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 VPS25Q9BRG1 176 aa6.33□□□□□ -1.4
SYNE2-226ENST00000557084 DSCR8Q96T75 97 aa6.32□□□□□ -1.4
SYNE2-226ENST00000557084 IGKV4-1P06312 121 aa6.31□□□□□ -1.4
SYNE2-226ENST00000557084 RBM3P98179 157 aaKnown RBP6.31□□□□□ -1.4
SYNE2-226ENST00000557084 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
SYNE2-226ENST00000557084 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
SYNE2-226ENST00000557084 BAALC-AS2P0C853 105 aa6.3□□□□□ -1.4
SYNE2-226ENST00000557084 DSCR10P59022 87 aa6.29□□□□□ -1.4
SYNE2-226ENST00000557084 ATXN8Q156A1 80 aa6.28□□□□□ -1.4
SYNE2-226ENST00000557084 C9JAW5 83 aa6.27□□□□□ -1.41
SYNE2-226ENST00000557084 LINC00313P59037 77 aa6.27□□□□□ -1.41
SYNE2-226ENST00000557084 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
SYNE2-226ENST00000557084 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
SYNE2-226ENST00000557084 C20orf166-AS1Q96NR2 134 aa6.26□□□□□ -1.41
SYNE2-226ENST00000557084 PCP4L1A6NKN8 68 aa6.25□□□□□ -1.41
SYNE2-226ENST00000557084 A8MUU9 505 aa6.25□□□□□ -1.41
SYNE2-226ENST00000557084 M0R2T5 61 aa6.25□□□□□ -1.41
SYNE2-226ENST00000557084 LYRM7Q5U5X0 104 aa6.25□□□□□ -1.41
SYNE2-226ENST00000557084 IGHV6-1A0A0B4J1U7 121 aa6.24□□□□□ -1.41
SYNE2-226ENST00000557084 MT1HP80294 61 aa6.24□□□□□ -1.41
SYNE2-226ENST00000557084 LINC00472Q9H8W2 130 aa6.24□□□□□ -1.41
SYNE2-226ENST00000557084 A0A1W2PPM0 123 aa6.23□□□□□ -1.41
SYNE2-226ENST00000557084 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SYNE2-226ENST00000557084 JMJD7-PLA2G4BH0Y9G9 81 aa6.22□□□□□ -1.41
SYNE2-226ENST00000557084 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
SYNE2-226ENST00000557084 TRBV20-1A0A075B6N2 111 aa6.21□□□□□ -1.42
SYNE2-226ENST00000557084 J3KT08 172 aa6.2□□□□□ -1.42
SYNE2-226ENST00000557084 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
SYNE2-226ENST00000557084 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
SYNE2-226ENST00000557084 PDE6GP18545 87 aa6.19□□□□□ -1.42
SYNE2-226ENST00000557084 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
SYNE2-226ENST00000557084 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
SYNE2-226ENST00000557084 Q6ZQT0 140 aa6.18□□□□□ -1.42
SYNE2-226ENST00000557084 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
SYNE2-226ENST00000557084 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-226ENST00000557084 LOC110117498A0A087WWA1 95 aa6.17□□□□□ -1.42
SYNE2-226ENST00000557084 NDUFB1O75438 58 aa6.17□□□□□ -1.42
SYNE2-226ENST00000557084 A0A1B0GW54 56 aa6.16□□□□□ -1.42
SYNE2-226ENST00000557084 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
SYNE2-226ENST00000557084 C14orf132Q9NPU4 83 aa6.16□□□□□ -1.42
SYNE2-226ENST00000557084 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.42
SYNE2-226ENST00000557084 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
SYNE2-226ENST00000557084 MTURNQ8N3F0 131 aa6.13□□□□□ -1.43
SYNE2-226ENST00000557084 H3BT86 120 aa6.12□□□□□ -1.43
SYNE2-226ENST00000557084 K7EP34 96 aa6.12□□□□□ -1.43
SYNE2-226ENST00000557084 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-226ENST00000557084 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
SYNE2-226ENST00000557084 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
SYNE2-226ENST00000557084 NREPQ16612 68 aa6.11□□□□□ -1.43
SYNE2-226ENST00000557084 A8MWP4 228 aa6.1□□□□□ -1.43
SYNE2-226ENST00000557084 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
SYNE2-226ENST00000557084 RBM12B-AS1Q9P1G2 102 aa6.09□□□□□ -1.43
SYNE2-226ENST00000557084 PRO0461Q9UI25 63 aa6.09□□□□□ -1.43
SYNE2-226ENST00000557084 C8orf17Q9NRJ1 99 aa6.07□□□□□ -1.44
SYNE2-226ENST00000557084 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
SYNE2-226ENST00000557084 IGKV3D-7A0A0C4DH55 119 aa6.05□□□□□ -1.44
SYNE2-226ENST00000557084 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
SYNE2-226ENST00000557084 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
SYNE2-226ENST00000557084 Q6ZVQ6 151 aa6.03□□□□□ -1.44
SYNE2-226ENST00000557084 GTF2H5Q6ZYL4 71 aa6.03□□□□□ -1.44
SYNE2-226ENST00000557084 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
SYNE2-226ENST00000557084 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-226ENST00000557084 HRES1P13985 223 aa6.01□□□□□ -1.45
SYNE2-226ENST00000557084 SPINK7P58062 85 aa6.01□□□□□ -1.45
SYNE2-226ENST00000557084 BPY2O14599 106 aa6□□□□□ -1.45
SYNE2-226ENST00000557084 F8W1H4 67 aa5.98□□□□□ -1.45
SYNE2-226ENST00000557084 NDUFS5O43920 106 aa5.98□□□□□ -1.45
SYNE2-226ENST00000557084 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
SYNE2-226ENST00000557084 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
SYNE2-226ENST00000557084 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
SYNE2-226ENST00000557084 K7EQZ3 153 aa5.97□□□□□ -1.45
SYNE2-226ENST00000557084 TMEM254Q8TBM7 123 aa5.97□□□□□ -1.45
SYNE2-226ENST00000557084 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
SYNE2-226ENST00000557084 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
SYNE2-226ENST00000557084 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SYNE2-226ENST00000557084 A0A1B0GV90 55 aa5.95□□□□□ -1.46
SYNE2-226ENST00000557084 ETDBQ3ZM63 59 aa5.94□□□□□ -1.46
SYNE2-226ENST00000557084 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
SYNE2-226ENST00000557084 UBL5Q9BZL1 73 aa5.91□□□□□ -1.46
SYNE2-226ENST00000557084 Q8N9L7 120 aa5.9□□□□□ -1.46
SYNE2-226ENST00000557084 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
SYNE2-226ENST00000557084 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
SYNE2-226ENST00000557084 LINC00846Q9NV44 126 aa5.88□□□□□ -1.47
SYNE2-226ENST00000557084 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
SYNE2-226ENST00000557084 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
SYNE2-226ENST00000557084 HCG22E2RYF7 251 aa5.85□□□□□ -1.47
SYNE2-226ENST00000557084 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
SYNE2-226ENST00000557084 MT2AP02795 61 aa5.83□□□□□ -1.48
SYNE2-226ENST00000557084 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
SYNE2-226ENST00000557084 CXCL6P80162 114 aa5.82□□□□□ -1.48
SYNE2-226ENST00000557084 USH2AO75445 5202 aa5.82□□□□□ -1.48
SYNE2-226ENST00000557084 Q5W150 140 aa5.81□□□□□ -1.48
SYNE2-226ENST00000557084 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
SYNE2-226ENST00000557084 FAM240AA0A1B0GVK7 77 aa5.78□□□□□ -1.48
SYNE2-226ENST00000557084 MT1FP04733 61 aa5.78□□□□□ -1.48
SYNE2-226ENST00000557084 PCP4P48539 62 aa5.78□□□□□ -1.48
SYNE2-226ENST00000557084 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
SYNE2-226ENST00000557084 ACYP1P07311 99 aa5.76□□□□□ -1.49
SYNE2-226ENST00000557084 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
SYNE2-226ENST00000557084 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms