RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 KRTAP16-1A8MUX0 517 aa11.99□□□□□ -0.49
TDP1-216ENST00000556867 J3KT08 172 aa11.98□□□□□ -0.49
TDP1-216ENST00000556867 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
TDP1-216ENST00000556867 NOTCH2NLQ7Z3S9 236 aa11.97□□□□□ -0.49
TDP1-216ENST00000556867 A0A1B0GVX0 72 aa11.96□□□□□ -0.49
TDP1-216ENST00000556867 COL5A1-AS1Q5SY13 56 aa11.95□□□□□ -0.5
TDP1-216ENST00000556867 MTURNQ8N3F0 131 aa11.95□□□□□ -0.5
TDP1-216ENST00000556867 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
TDP1-216ENST00000556867 SPCS1Q9Y6A9 102 aa11.93□□□□□ -0.5
TDP1-216ENST00000556867 MT1HP80294 61 aa11.87□□□□□ -0.51
TDP1-216ENST00000556867 NDUFB1O75438 58 aa11.85□□□□□ -0.51
TDP1-216ENST00000556867 A8MWP4 228 aa11.84□□□□□ -0.51
TDP1-216ENST00000556867 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
TDP1-216ENST00000556867 COX6B2Q6YFQ2 88 aa11.83□□□□□ -0.52
TDP1-216ENST00000556867 NREPQ16612 68 aa11.82□□□□□ -0.52
TDP1-216ENST00000556867 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
TDP1-216ENST00000556867 IGKV3D-7A0A0C4DH55 119 aa11.78□□□□□ -0.52
TDP1-216ENST00000556867 K7EP34 96 aa11.78□□□□□ -0.52
TDP1-216ENST00000556867 PCP4L1A6NKN8 68 aa11.76□□□□□ -0.53
TDP1-216ENST00000556867 C8orf17Q9NRJ1 99 aa11.76□□□□□ -0.53
TDP1-216ENST00000556867 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
TDP1-216ENST00000556867 FLGP20930 4061 aaPredicted RBP11.76□□□□□ -0.53
TDP1-216ENST00000556867 PRR15Q8IV56 129 aa11.73□□□□□ -0.53
TDP1-216ENST00000556867 Q8N9P0 234 aaPredicted RBP11.72□□□□□ -0.53
TDP1-216ENST00000556867 ZCCHC13Q8WW36 166 aaKnown RBP11.68□□□□□ -0.54
TDP1-216ENST00000556867 Q6ZVQ6 151 aa11.66□□□□□ -0.54
TDP1-216ENST00000556867 GTF2H5Q6ZYL4 71 aa11.66□□□□□ -0.54
TDP1-216ENST00000556867 MMP24-AS1A0A0U1RRL7 71 aa11.63□□□□□ -0.55
TDP1-216ENST00000556867 K7EQZ3 153 aa11.63□□□□□ -0.55
TDP1-216ENST00000556867 M0R2T5 61 aa11.63□□□□□ -0.55
TDP1-216ENST00000556867 BPY2O14599 106 aa11.63□□□□□ -0.55
TDP1-216ENST00000556867 HRES1P13985 223 aa11.6□□□□□ -0.55
TDP1-216ENST00000556867 KRTAP10-6P60371 365 aaPredicted RBP11.6□□□□□ -0.55
TDP1-216ENST00000556867 TMEM254Q8TBM7 123 aa11.6□□□□□ -0.55
TDP1-216ENST00000556867 LORP23490 312 aaPredicted RBP11.59□□□□□ -0.55
TDP1-216ENST00000556867 MPLKIPQ8TAP9 179 aa11.59□□□□□ -0.55
TDP1-216ENST00000556867 MRPL34Q9BQ48 92 aaKnown RBP11.57□□□□□ -0.56
TDP1-216ENST00000556867 F8W1H4 67 aa11.56□□□□□ -0.56
TDP1-216ENST00000556867 hDV103S1A0JD37 113 aa11.55□□□□□ -0.56
TDP1-216ENST00000556867 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
TDP1-216ENST00000556867 RBM12B-AS1Q9P1G2 102 aa11.53□□□□□ -0.56
TDP1-216ENST00000556867 UBL5Q9BZL1 73 aa11.52□□□□□ -0.57
TDP1-216ENST00000556867 SPINK7P58062 85 aa11.51□□□□□ -0.57
TDP1-216ENST00000556867 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
TDP1-216ENST00000556867 FAM236DA0A1B0GTK5 79 aa11.5□□□□□ -0.57
TDP1-216ENST00000556867 FAM236CP0DP71 79 aa11.5□□□□□ -0.57
TDP1-216ENST00000556867 Q8N9L7 120 aa11.49□□□□□ -0.57
TDP1-216ENST00000556867 ETDBQ3ZM63 59 aa11.48□□□□□ -0.57
TDP1-216ENST00000556867 KRTAP9-6A0A140TA67 174 aa11.47□□□□□ -0.57
TDP1-216ENST00000556867 NDUFS5O43920 106 aa11.44□□□□□ -0.58
TDP1-216ENST00000556867 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
TDP1-216ENST00000556867 CASC2Q6XLA1 102 aa11.42□□□□□ -0.58
TDP1-216ENST00000556867 HCG22E2RYF7 251 aa11.33□□□□□ -0.6
TDP1-216ENST00000556867 CXCL6P80162 114 aa11.31□□□□□ -0.6
TDP1-216ENST00000556867 Q5W150 140 aa11.31□□□□□ -0.6
TDP1-216ENST00000556867 KRTAP9-8Q9BYQ0 159 aa11.26□□□□□ -0.61
TDP1-216ENST00000556867 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
TDP1-216ENST00000556867 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
TDP1-216ENST00000556867 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
TDP1-216ENST00000556867 ACYP1P07311 99 aa11.23□□□□□ -0.61
TDP1-216ENST00000556867 FAM240AA0A1B0GVK7 77 aa11.21□□□□□ -0.61
TDP1-216ENST00000556867 CRCT1Q9UGL9 99 aa11.17□□□□□ -0.62
TDP1-216ENST00000556867 A0A1B0GV90 55 aa11.14□□□□□ -0.63
TDP1-216ENST00000556867 FSIP2Q5CZC0 6907 aa11.14□□□□□ -0.63
TDP1-216ENST00000556867 MT2AP02795 61 aa11.13□□□□□ -0.63
TDP1-216ENST00000556867 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
TDP1-216ENST00000556867 ATP5EP2Q5VTU8 51 aa11.11□□□□□ -0.63
TDP1-216ENST00000556867 H1FX-AS1Q4G0G2 97 aa11.09□□□□□ -0.63
TDP1-216ENST00000556867 MT1FP04733 61 aa11.04□□□□□ -0.64
TDP1-216ENST00000556867 C4orf26Q17RF5 130 aa11.02□□□□□ -0.65
TDP1-216ENST00000556867 KRTAP10-10P60014 251 aa10.97□□□□□ -0.65
TDP1-216ENST00000556867 HIST1H4AP62805 103 aaKnown RBP10.97□□□□□ -0.65
TDP1-216ENST00000556867 LINC00643Q86TS7 51 aa10.97□□□□□ -0.65
TDP1-216ENST00000556867 TRAV22A0A0B4J277 110 aa10.9□□□□□ -0.66
TDP1-216ENST00000556867 KRTAP9-3Q9BYQ3 159 aa10.9□□□□□ -0.66
TDP1-216ENST00000556867 KRTAP3-1Q9BYR8 98 aa10.87□□□□□ -0.67
TDP1-216ENST00000556867 USH2AO75445 5202 aa10.86□□□□□ -0.67
TDP1-216ENST00000556867 A0A087WVE0 104 aa10.85□□□□□ -0.67
TDP1-216ENST00000556867 CYP4F30PQ9H0H9 118 aa10.85□□□□□ -0.67
TDP1-216ENST00000556867 C1orf64Q8NEQ6 169 aa10.84□□□□□ -0.67
TDP1-216ENST00000556867 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
TDP1-216ENST00000556867 J3QR89 54 aa10.83□□□□□ -0.68
TDP1-216ENST00000556867 UQCRQO14949 82 aa10.83□□□□□ -0.68
TDP1-216ENST00000556867 LCE2BO14633 110 aa10.8□□□□□ -0.68
TDP1-216ENST00000556867 ATOX1O00244 68 aa10.76□□□□□ -0.69
TDP1-216ENST00000556867 H0Y9P7 68 aa10.75□□□□□ -0.69
TDP1-216ENST00000556867 S4R3F8 94 aa10.75□□□□□ -0.69
TDP1-216ENST00000556867 SSPOA2VEC9 5147 aa10.72□□□□□ -0.69
TDP1-216ENST00000556867 C5orf47Q569G3 176 aa10.71□□□□□ -0.69
TDP1-216ENST00000556867 LCA10Q71F78 164 aa10.68□□□□□ -0.7
TDP1-216ENST00000556867 OCR1Q9BZK8 76 aa10.67□□□□□ -0.7
TDP1-216ENST00000556867 CSAG1Q6PB30 78 aa10.64□□□□□ -0.71
TDP1-216ENST00000556867 LINC00208Q96KT6 92 aa10.59□□□□□ -0.71
TDP1-216ENST00000556867 MP68P56378 58 aa10.57□□□□□ -0.72
TDP1-216ENST00000556867 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
TDP1-216ENST00000556867 KRTAP19-1Q8IUB9 90 aa10.52□□□□□ -0.73
TDP1-216ENST00000556867 K7ERU9 68 aa10.51□□□□□ -0.73
TDP1-216ENST00000556867 KLKP1Q107X0 134 aa10.51□□□□□ -0.73
TDP1-216ENST00000556867 FAM236AA0A1B0GUQ0 79 aa10.5□□□□□ -0.73
TDP1-216ENST00000556867 FAM236BA0A1B0GV22 79 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms