RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 JMJD1CQ15652 2540 aa2.92□□□□□ -1.94
PCNX1-214ENST00000556849 CRYBG3Q68DQ2 2970 aa2.92□□□□□ -1.94
PCNX1-214ENST00000556849 DOPEY1Q5JWR5 2465 aa2.92□□□□□ -1.94
PCNX1-214ENST00000556849 GVINP1Q7Z2Y8 2422 aa2.91□□□□□ -1.94
PCNX1-214ENST00000556849 APCP25054 2843 aa2.91□□□□□ -1.94
PCNX1-214ENST00000556849 BDP1A6H8Y1 2624 aa2.91□□□□□ -1.94
PCNX1-214ENST00000556849 HIVEP2P31629 2446 aa2.91□□□□□ -1.94
PCNX1-214ENST00000556849 PTPN13Q12923 2485 aa2.9□□□□□ -1.95
PCNX1-214ENST00000556849 KRTAP1-5Q9BYS1 174 aa2.9□□□□□ -1.95
PCNX1-214ENST00000556849 UTP20O75691 2785 aaKnown RBP2.89□□□□□ -1.95
PCNX1-214ENST00000556849 SPTBN4Q9H254 2564 aa2.89□□□□□ -1.95
PCNX1-214ENST00000556849 MYO9AB2RTY4 2548 aa2.88□□□□□ -1.95
PCNX1-214ENST00000556849 OTOGQ6ZRI0 2925 aa2.88□□□□□ -1.95
PCNX1-214ENST00000556849 RPL37P61927 97 aaKnown RBP2.88□□□□□ -1.95
PCNX1-214ENST00000556849 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
PCNX1-214ENST00000556849 ZFYVE26Q68DK2 2539 aa2.88□□□□□ -1.95
PCNX1-214ENST00000556849 SPINK1P00995 79 aa2.87□□□□□ -1.95
PCNX1-214ENST00000556849 Q6ZRN7 208 aaPredicted RBP2.86□□□□□ -1.95
PCNX1-214ENST00000556849 USP9XQ93008 2570 aaPredicted RBP2.86□□□□□ -1.95
PCNX1-214ENST00000556849 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
PCNX1-214ENST00000556849 RIF1Q5UIP0 2472 aaKnown RBP2.85□□□□□ -1.95
PCNX1-214ENST00000556849 NF1P21359 2839 aa2.85□□□□□ -1.95
PCNX1-214ENST00000556849 USP9YO00507 2555 aaPredicted RBP2.85□□□□□ -1.95
PCNX1-214ENST00000556849 ANKRD17O75179 2603 aaKnown RBP2.85□□□□□ -1.95
PCNX1-214ENST00000556849 NBEAL2Q6ZNJ1 2754 aa2.84□□□□□ -1.95
PCNX1-214ENST00000556849 APLNQ9ULZ1 77 aa2.84□□□□□ -1.95
PCNX1-214ENST00000556849 TEX15Q9BXT5 2789 aa2.83□□□□□ -1.96
PCNX1-214ENST00000556849 FBN2P35556 2912 aa2.83□□□□□ -1.96
PCNX1-214ENST00000556849 GCN1Q92616 2671 aaKnown RBP2.83□□□□□ -1.96
PCNX1-214ENST00000556849 NBDYA0A0U1RRE5 68 aa2.83□□□□□ -1.96
PCNX1-214ENST00000556849 UBE2DNLQ8IWF7 75 aa2.83□□□□□ -1.96
PCNX1-214ENST00000556849 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
PCNX1-214ENST00000556849 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
PCNX1-214ENST00000556849 ZFHX2Q9C0A1 2572 aaPredicted RBP2.82□□□□□ -1.96
PCNX1-214ENST00000556849 EPG5Q9HCE0 2579 aa2.82□□□□□ -1.96
PCNX1-214ENST00000556849 ZANQ9Y493 2812 aa2.82□□□□□ -1.96
PCNX1-214ENST00000556849 MUC3AQ02505 3323 aa2.81□□□□□ -1.96
PCNX1-214ENST00000556849 IGF2RP11717 2491 aa2.8□□□□□ -1.96
PCNX1-214ENST00000556849 F8P00451 2351 aa2.8□□□□□ -1.96
PCNX1-214ENST00000556849 CSMD2Q7Z408 3487 aa2.79□□□□□ -1.96
PCNX1-214ENST00000556849 NAV2Q8IVL1 2488 aa2.79□□□□□ -1.96
PCNX1-214ENST00000556849 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
PCNX1-214ENST00000556849 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
PCNX1-214ENST00000556849 NIPBLQ6KC79 2804 aaeCLIP2.78□□□□□ -1.96
PCNX1-214ENST00000556849 CFAP46Q8IYW2 2715 aa2.78□□□□□ -1.96
PCNX1-214ENST00000556849 UNC79Q9P2D8 2635 aa2.78□□□□□ -1.96
PCNX1-214ENST00000556849 KRTAP10-6P60371 365 aaPredicted RBP2.77□□□□□ -1.97
PCNX1-214ENST00000556849 HIVEP1P15822 2718 aa2.77□□□□□ -1.97
PCNX1-214ENST00000556849 DNAH8Q96JB1 4490 aa2.77□□□□□ -1.97
PCNX1-214ENST00000556849 LRRK2Q5S007 2527 aa2.77□□□□□ -1.97
PCNX1-214ENST00000556849 TTC28Q96AY4 2481 aa2.77□□□□□ -1.97
PCNX1-214ENST00000556849 MUC6Q6W4X9 2439 aa2.77□□□□□ -1.97
PCNX1-214ENST00000556849 SMR3AQ99954 134 aa2.76□□□□□ -1.97
PCNX1-214ENST00000556849 PIEZO1Q92508 2521 aa2.75□□□□□ -1.97
PCNX1-214ENST00000556849 CHD8Q9HCK8 2581 aa2.75□□□□□ -1.97
PCNX1-214ENST00000556849 DNAH3Q8TD57 4116 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 ITPR3Q14573 2671 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
PCNX1-214ENST00000556849 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 S4R3F8 94 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 TENM4Q6N022 2769 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 MTORP42345 2549 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 DNAH10Q8IVF4 4471 aa2.74□□□□□ -1.97
PCNX1-214ENST00000556849 TRRAPQ9Y4A5 3859 aa2.73□□□□□ -1.97
PCNX1-214ENST00000556849 KRTAP1-4P0C5Y4 121 aa2.73□□□□□ -1.97
PCNX1-214ENST00000556849 DNAH17Q9UFH2 4485 aa2.73□□□□□ -1.97
PCNX1-214ENST00000556849 SRRM2Q9UQ35 2752 aaKnown RBP2.73□□□□□ -1.97
PCNX1-214ENST00000556849 ANK2Q01484 3957 aa2.73□□□□□ -1.97
PCNX1-214ENST00000556849 DYNC2H1Q8NCM8 4307 aaKnown RBP2.72□□□□□ -1.97
PCNX1-214ENST00000556849 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
PCNX1-214ENST00000556849 SONP18583 2426 aaKnown RBP2.71□□□□□ -1.98
PCNX1-214ENST00000556849 PKD1L2Q7Z442 2459 aa2.71□□□□□ -1.98
PCNX1-214ENST00000556849 POLQO75417 2590 aa2.71□□□□□ -1.98
PCNX1-214ENST00000556849 FRAS1Q86XX4 4008 aa2.7□□□□□ -1.98
PCNX1-214ENST00000556849 CCDC168Q8NDH2 2452 aa2.7□□□□□ -1.98
PCNX1-214ENST00000556849 UBR5O95071 2799 aaPredicted RBP2.7□□□□□ -1.98
PCNX1-214ENST00000556849 ZNF462Q96JM2 2506 aa2.7□□□□□ -1.98
PCNX1-214ENST00000556849 SETD2Q9BYW2 2564 aaPredicted RBP2.69□□□□□ -1.98
PCNX1-214ENST00000556849 DNAH9Q9NYC9 4486 aa2.69□□□□□ -1.98
PCNX1-214ENST00000556849 ACACBO00763 2458 aa2.69□□□□□ -1.98
PCNX1-214ENST00000556849 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
PCNX1-214ENST00000556849 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
PCNX1-214ENST00000556849 ZNF469Q96JG9 3925 aaPredicted RBP2.68□□□□□ -1.98
PCNX1-214ENST00000556849 HUWE1Q7Z6Z7 4374 aaKnown RBP2.68□□□□□ -1.98
PCNX1-214ENST00000556849 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
PCNX1-214ENST00000556849 VWFP04275 2813 aa2.67□□□□□ -1.98
PCNX1-214ENST00000556849 A0A0D9SG42 100 aa2.67□□□□□ -1.98
PCNX1-214ENST00000556849 FBN1P35555 2871 aaKnown RBP2.67□□□□□ -1.98
PCNX1-214ENST00000556849 CUBNO60494 3623 aa2.67□□□□□ -1.98
PCNX1-214ENST00000556849 PDZD2O15018 2839 aa2.67□□□□□ -1.98
PCNX1-214ENST00000556849 FLNAP21333 2647 aaKnown RBP2.67□□□□□ -1.98
PCNX1-214ENST00000556849 ABCA12Q86UK0 2595 aa2.66□□□□□ -1.98
PCNX1-214ENST00000556849 LYSTQ99698 3801 aa2.66□□□□□ -1.98
PCNX1-214ENST00000556849 HECTD1Q9ULT8 2610 aa2.66□□□□□ -1.98
PCNX1-214ENST00000556849 M0QZ58 72 aa2.66□□□□□ -1.98
PCNX1-214ENST00000556849 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
PCNX1-214ENST00000556849 FLNCQ14315 2725 aa2.66□□□□□ -1.98
PCNX1-214ENST00000556849 NOTCH2Q04721 2471 aa2.65□□□□□ -1.98
PCNX1-214ENST00000556849 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.99
PCNX1-214ENST00000556849 PRKDCP78527 4128 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms