RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ACACAQ13085 2346 aa1.62□□□□□ -2.15
PRPF39-210ENST00000556718 SPTA1P02549 2419 aa1.62□□□□□ -2.15
PRPF39-210ENST00000556718 SPTAN1Q13813 2472 aaKnown RBP1.62□□□□□ -2.15
PRPF39-210ENST00000556718 ITPR1Q14643 2758 aa1.62□□□□□ -2.15
PRPF39-210ENST00000556718 MKI67P46013 3256 aaKnown RBP1.62□□□□□ -2.15
PRPF39-210ENST00000556718 DNAH14Q0VDD8 3507 aa1.61□□□□□ -2.15
PRPF39-210ENST00000556718 CEP290O15078 2479 aa1.61□□□□□ -2.15
PRPF39-210ENST00000556718 CFAP47Q6ZTR5 3102 aa1.61□□□□□ -2.15
PRPF39-210ENST00000556718 TENM2Q9NT68 2774 aa1.61□□□□□ -2.15
PRPF39-210ENST00000556718 OTOGLQ3ZCN5 2332 aa1.61□□□□□ -2.15
PRPF39-210ENST00000556718 NCOR1O75376 2440 aa1.6□□□□□ -2.15
PRPF39-210ENST00000556718 REV3LO60673 3130 aa1.59□□□□□ -2.15
PRPF39-210ENST00000556718 CELSR2Q9HCU4 2923 aa1.59□□□□□ -2.15
PRPF39-210ENST00000556718 S4R3F8 94 aa1.59□□□□□ -2.15
PRPF39-210ENST00000556718 SPG11Q96JI7 2443 aa1.59□□□□□ -2.16
PRPF39-210ENST00000556718 ZDBF2Q9HCK1 2354 aa1.58□□□□□ -2.16
PRPF39-210ENST00000556718 FREM2Q5SZK8 3169 aa1.58□□□□□ -2.16
PRPF39-210ENST00000556718 UTP20O75691 2785 aaKnown RBP1.58□□□□□ -2.16
PRPF39-210ENST00000556718 NCOR2Q9Y618 2525 aa1.58□□□□□ -2.16
PRPF39-210ENST00000556718 A0A0D9SG42 100 aa1.58□□□□□ -2.16
PRPF39-210ENST00000556718 SPTBN4Q9H254 2564 aa1.57□□□□□ -2.16
PRPF39-210ENST00000556718 DCHS2Q6V1P9 2916 aa1.57□□□□□ -2.16
PRPF39-210ENST00000556718 ASH1LQ9NR48 2969 aaKnown RBP1.57□□□□□ -2.16
PRPF39-210ENST00000556718 ABCA2Q9BZC7 2435 aa1.57□□□□□ -2.16
PRPF39-210ENST00000556718 C10orf95Q9H7T3 257 aa1.57□□□□□ -2.16
PRPF39-210ENST00000556718 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-210ENST00000556718 OTOGQ6ZRI0 2925 aa1.57□□□□□ -2.16
PRPF39-210ENST00000556718 CSPG4Q6UVK1 2322 aa1.57□□□□□ -2.16
PRPF39-210ENST00000556718 LAMA3Q16787 3333 aa1.56□□□□□ -2.16
PRPF39-210ENST00000556718 CELSR1Q9NYQ6 3014 aa1.56□□□□□ -2.16
PRPF39-210ENST00000556718 SPTBN5Q9NRC6 3674 aaKnown RBP1.56□□□□□ -2.16
PRPF39-210ENST00000556718 M0QZ58 72 aa1.56□□□□□ -2.16
PRPF39-210ENST00000556718 RPS29P62273 56 aaKnown RBP1.56□□□□□ -2.16
PRPF39-210ENST00000556718 SETXQ7Z333 2677 aaKnown RBP1.55□□□□□ -2.16
PRPF39-210ENST00000556718 TEX15Q9BXT5 2789 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 USP34Q70CQ2 3546 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 NBASA2RRP1 2371 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 ADGRG4Q8IZF6 3080 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 BOD1L1Q8NFC6 3051 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 INE1O15225 51 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 NF1P21359 2839 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 DMDP11532 3685 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 IGF2RP11717 2491 aa1.55□□□□□ -2.16
PRPF39-210ENST00000556718 ANKRD11Q6UB99 2663 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-210ENST00000556718 APCP25054 2843 aa1.54□□□□□ -2.16
PRPF39-210ENST00000556718 TLN1Q9Y490 2541 aaKnown RBP1.54□□□□□ -2.16
PRPF39-210ENST00000556718 TLN2Q9Y4G6 2542 aa1.54□□□□□ -2.16
PRPF39-210ENST00000556718 BRCA2P51587 3418 aa1.54□□□□□ -2.16
PRPF39-210ENST00000556718 GVINP1Q7Z2Y8 2422 aa1.54□□□□□ -2.16
PRPF39-210ENST00000556718 DCHS1Q96JQ0 3298 aa1.53□□□□□ -2.16
PRPF39-210ENST00000556718 COL12A1Q99715 3063 aa1.53□□□□□ -2.17
PRPF39-210ENST00000556718 NBEAL2Q6ZNJ1 2754 aa1.53□□□□□ -2.17
PRPF39-210ENST00000556718 VCANP13611 3396 aa1.52□□□□□ -2.17
PRPF39-210ENST00000556718 ATMQ13315 3056 aa1.52□□□□□ -2.17
PRPF39-210ENST00000556718 WDFY3Q8IZQ1 3526 aa1.52□□□□□ -2.17
PRPF39-210ENST00000556718 CELSR3Q9NYQ7 3312 aa1.52□□□□□ -2.17
PRPF39-210ENST00000556718 GCN1Q92616 2671 aaKnown RBP1.52□□□□□ -2.17
PRPF39-210ENST00000556718 RIF1Q5UIP0 2472 aaKnown RBP1.51□□□□□ -2.17
PRPF39-210ENST00000556718 DMXL1Q9Y485 3027 aa1.51□□□□□ -2.17
PRPF39-210ENST00000556718 CDH23Q9H251 3354 aa1.51□□□□□ -2.17
PRPF39-210ENST00000556718 CRYBG3Q68DQ2 2970 aa1.5□□□□□ -2.17
PRPF39-210ENST00000556718 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-210ENST00000556718 MXRA5Q9NR99 2828 aa1.5□□□□□ -2.17
PRPF39-210ENST00000556718 UBR5O95071 2799 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-210ENST00000556718 MYO9AB2RTY4 2548 aa1.5□□□□□ -2.17
PRPF39-210ENST00000556718 FBN3Q75N90 2809 aa1.5□□□□□ -2.17
PRPF39-210ENST00000556718 CEP295Q9C0D2 2601 aa1.5□□□□□ -2.17
PRPF39-210ENST00000556718 SMG1Q96Q15 3661 aaKnown RBP1.49□□□□□ -2.17
PRPF39-210ENST00000556718 USP9XQ93008 2570 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-210ENST00000556718 JMJD1CQ15652 2540 aa1.49□□□□□ -2.17
PRPF39-210ENST00000556718 ZFHX4Q86UP3 3567 aa1.48□□□□□ -2.17
PRPF39-210ENST00000556718 CSMD1Q96PZ7 3565 aa1.48□□□□□ -2.17
PRPF39-210ENST00000556718 CENPEQ02224 2701 aa1.48□□□□□ -2.17
PRPF39-210ENST00000556718 SPEGQ15772 3267 aa1.48□□□□□ -2.17
PRPF39-210ENST00000556718 SRRM2Q9UQ35 2752 aaKnown RBP1.47□□□□□ -2.17
PRPF39-210ENST00000556718 SPENQ96T58 3664 aaKnown RBP1.47□□□□□ -2.17
PRPF39-210ENST00000556718 NAV2Q8IVL1 2488 aa1.47□□□□□ -2.17
PRPF39-210ENST00000556718 ZFYVE26Q68DK2 2539 aa1.47□□□□□ -2.17
PRPF39-210ENST00000556718 SONP18583 2426 aaKnown RBP1.47□□□□□ -2.17
PRPF39-210ENST00000556718 NIPBLQ6KC79 2804 aaeCLIP1.47□□□□□ -2.17
PRPF39-210ENST00000556718 F8P00451 2351 aa1.47□□□□□ -2.17
PRPF39-210ENST00000556718 PTPN13Q12923 2485 aa1.46□□□□□ -2.18
PRPF39-210ENST00000556718 HIVEP3Q5T1R4 2406 aa1.46□□□□□ -2.18
PRPF39-210ENST00000556718 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
PRPF39-210ENST00000556718 UNC79Q9P2D8 2635 aa1.46□□□□□ -2.18
PRPF39-210ENST00000556718 TENM4Q6N022 2769 aa1.46□□□□□ -2.18
PRPF39-210ENST00000556718 LOC400499M0QZD8 3231 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 VWFP04275 2813 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 CHD8Q9HCK8 2581 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 CFAP46Q8IYW2 2715 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 MTORP42345 2549 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 ZNF462Q96JM2 2506 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 EPG5Q9HCE0 2579 aa1.45□□□□□ -2.18
PRPF39-210ENST00000556718 HELZ2Q9BYK8 2649 aaKnown RBP1.44□□□□□ -2.18
PRPF39-210ENST00000556718 HECTD1Q9ULT8 2610 aa1.44□□□□□ -2.18
PRPF39-210ENST00000556718 NBPF19A0A087WUL8 3843 aa1.44□□□□□ -2.18
PRPF39-210ENST00000556718 BDP1A6H8Y1 2624 aa1.44□□□□□ -2.18
PRPF39-210ENST00000556718 ZNF292O60281 2723 aa1.44□□□□□ -2.18
PRPF39-210ENST00000556718 DOPEY1Q5JWR5 2465 aa1.43□□□□□ -2.18
PRPF39-210ENST00000556718 PIEZO1Q92508 2521 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms