RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 IGKV3D-7A0A0C4DH55 119 aa5.44□□□□□ -1.54
ACTN1-215ENST00000555616 CXCL6P80162 114 aa5.44□□□□□ -1.54
ACTN1-215ENST00000555616 ASB16-AS1Q495Z4 193 aa5.44□□□□□ -1.54
ACTN1-215ENST00000555616 MUC2Q02817 5179 aa5.43□□□□□ -1.54
ACTN1-215ENST00000555616 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
ACTN1-215ENST00000555616 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
ACTN1-215ENST00000555616 A0A0U1RQV1 116 aa5.4□□□□□ -1.54
ACTN1-215ENST00000555616 BPY2O14599 106 aa5.4□□□□□ -1.54
ACTN1-215ENST00000555616 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
ACTN1-215ENST00000555616 J3KT08 172 aa5.39□□□□□ -1.55
ACTN1-215ENST00000555616 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
ACTN1-215ENST00000555616 HIST1H4AP62805 103 aaKnown RBP5.38□□□□□ -1.55
ACTN1-215ENST00000555616 C1orf195Q5TG92 126 aa5.38□□□□□ -1.55
ACTN1-215ENST00000555616 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
ACTN1-215ENST00000555616 Q96NJ1 140 aa5.37□□□□□ -1.55
ACTN1-215ENST00000555616 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
ACTN1-215ENST00000555616 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
ACTN1-215ENST00000555616 FAM236AA0A1B0GUQ0 79 aa5.35□□□□□ -1.55
ACTN1-215ENST00000555616 FAM236BA0A1B0GV22 79 aa5.35□□□□□ -1.55
ACTN1-215ENST00000555616 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
ACTN1-215ENST00000555616 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
ACTN1-215ENST00000555616 A0A087WVE0 104 aa5.34□□□□□ -1.55
ACTN1-215ENST00000555616 NDUFB1O75438 58 aa5.34□□□□□ -1.55
ACTN1-215ENST00000555616 A8MWP4 228 aa5.33□□□□□ -1.56
ACTN1-215ENST00000555616 DSCR10P59022 87 aa5.33□□□□□ -1.56
ACTN1-215ENST00000555616 ATOX1O00244 68 aa5.31□□□□□ -1.56
ACTN1-215ENST00000555616 XP32Q5T750 250 aa5.31□□□□□ -1.56
ACTN1-215ENST00000555616 Q8N9L7 120 aa5.31□□□□□ -1.56
ACTN1-215ENST00000555616 FAT4Q6V0I7 4981 aa5.31□□□□□ -1.56
ACTN1-215ENST00000555616 A0A1B0GVX0 72 aa5.3□□□□□ -1.56
ACTN1-215ENST00000555616 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
ACTN1-215ENST00000555616 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
ACTN1-215ENST00000555616 K7EQZ3 153 aa5.29□□□□□ -1.56
ACTN1-215ENST00000555616 PRR15Q8IV56 129 aa5.29□□□□□ -1.56
ACTN1-215ENST00000555616 ANAPC13Q9BS18 74 aa5.29□□□□□ -1.56
ACTN1-215ENST00000555616 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
ACTN1-215ENST00000555616 C8orf87E5RJ46 101 aa5.27□□□□□ -1.57
ACTN1-215ENST00000555616 HCG22E2RYF7 251 aa5.26□□□□□ -1.57
ACTN1-215ENST00000555616 LINC00313P59037 77 aa5.26□□□□□ -1.57
ACTN1-215ENST00000555616 SMIM20Q8N5G0 67 aa5.26□□□□□ -1.57
ACTN1-215ENST00000555616 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
ACTN1-215ENST00000555616 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
ACTN1-215ENST00000555616 C8orf17Q9NRJ1 99 aa5.24□□□□□ -1.57
ACTN1-215ENST00000555616 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
ACTN1-215ENST00000555616 SERP2Q8N6R1 65 aa5.23□□□□□ -1.57
ACTN1-215ENST00000555616 TRAV7A0A075B6U4 112 aa5.22□□□□□ -1.57
ACTN1-215ENST00000555616 MMP24-AS1A0A0U1RRL7 71 aa5.21□□□□□ -1.58
ACTN1-215ENST00000555616 hDV103S1A0JD37 113 aa5.21□□□□□ -1.58
ACTN1-215ENST00000555616 COX7CP15954 63 aa5.21□□□□□ -1.58
ACTN1-215ENST00000555616 CASC2Q6XLA1 102 aa5.21□□□□□ -1.58
ACTN1-215ENST00000555616 UQCRQO14949 82 aa5.2□□□□□ -1.58
ACTN1-215ENST00000555616 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
ACTN1-215ENST00000555616 WFDC13Q8IUB5 93 aa5.2□□□□□ -1.58
ACTN1-215ENST00000555616 TMEM254Q8TBM7 123 aa5.2□□□□□ -1.58
ACTN1-215ENST00000555616 OCR1Q9BZK8 76 aa5.19□□□□□ -1.58
ACTN1-215ENST00000555616 MRPL34Q9BQ48 92 aaKnown RBP5.18□□□□□ -1.58
ACTN1-215ENST00000555616 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
ACTN1-215ENST00000555616 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
ACTN1-215ENST00000555616 CCDC179H3BU77 68 aa5.16□□□□□ -1.58
ACTN1-215ENST00000555616 C5orf47Q569G3 176 aa5.16□□□□□ -1.58
ACTN1-215ENST00000555616 NDUFS5O43920 106 aa5.15□□□□□ -1.59
ACTN1-215ENST00000555616 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.59
ACTN1-215ENST00000555616 C20orf166-AS1Q96NR2 134 aa5.15□□□□□ -1.59
ACTN1-215ENST00000555616 A8MUU9 505 aa5.14□□□□□ -1.59
ACTN1-215ENST00000555616 SEC61GP60059 68 aa5.14□□□□□ -1.59
ACTN1-215ENST00000555616 Q75L30 129 aa5.14□□□□□ -1.59
ACTN1-215ENST00000555616 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
ACTN1-215ENST00000555616 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
ACTN1-215ENST00000555616 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
ACTN1-215ENST00000555616 TP53AIP1Q9HCN2 124 aa5.13□□□□□ -1.59
ACTN1-215ENST00000555616 ATP11AUNQ6ZP68 121 aa5.1□□□□□ -1.59
ACTN1-215ENST00000555616 C20orf197Q8N268 126 aa5.1□□□□□ -1.59
ACTN1-215ENST00000555616 MP68P56378 58 aa5.09□□□□□ -1.59
ACTN1-215ENST00000555616 KLKP1Q107X0 134 aa5.09□□□□□ -1.59
ACTN1-215ENST00000555616 H3BPC8 53 aa5.08□□□□□ -1.6
ACTN1-215ENST00000555616 ZCCHC13Q8WW36 166 aaKnown RBP5.07□□□□□ -1.6
ACTN1-215ENST00000555616 TRAV22A0A0B4J277 110 aa5.06□□□□□ -1.6
ACTN1-215ENST00000555616 H0Y9P7 68 aa5.06□□□□□ -1.6
ACTN1-215ENST00000555616 NDUFC1O43677 76 aa5.06□□□□□ -1.6
ACTN1-215ENST00000555616 MT1HP80294 61 aa5.05□□□□□ -1.6
ACTN1-215ENST00000555616 SNURFQ9Y675 71 aa5.05□□□□□ -1.6
ACTN1-215ENST00000555616 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
ACTN1-215ENST00000555616 Q5W150 140 aa5.02□□□□□ -1.61
ACTN1-215ENST00000555616 LINC00208Q96KT6 92 aa5.02□□□□□ -1.61
ACTN1-215ENST00000555616 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
ACTN1-215ENST00000555616 TMEM258P61165 79 aa5.01□□□□□ -1.61
ACTN1-215ENST00000555616 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
ACTN1-215ENST00000555616 H7BZZ5 65 aa5□□□□□ -1.61
ACTN1-215ENST00000555616 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
ACTN1-215ENST00000555616 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
ACTN1-215ENST00000555616 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
ACTN1-215ENST00000555616 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
ACTN1-215ENST00000555616 C7orf65Q6ZTY9 151 aa4.97□□□□□ -1.61
ACTN1-215ENST00000555616 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
ACTN1-215ENST00000555616 ATP5EP56381 51 aaPredicted RBP4.96□□□□□ -1.62
ACTN1-215ENST00000555616 SPINK7P58062 85 aa4.96□□□□□ -1.62
ACTN1-215ENST00000555616 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
ACTN1-215ENST00000555616 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
ACTN1-215ENST00000555616 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
ACTN1-215ENST00000555616 H3BS24 57 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms