RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 Q96NJ1 140 aa5.78□□□□□ -1.48
NEK9-205ENST00000555405 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
NEK9-205ENST00000555405 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
NEK9-205ENST00000555405 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
NEK9-205ENST00000555405 OXTP01178 125 aa5.77□□□□□ -1.49
NEK9-205ENST00000555405 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
NEK9-205ENST00000555405 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
NEK9-205ENST00000555405 CXCL6P80162 114 aa5.76□□□□□ -1.49
NEK9-205ENST00000555405 A8MWP4 228 aa5.76□□□□□ -1.49
NEK9-205ENST00000555405 J3KT08 172 aa5.75□□□□□ -1.49
NEK9-205ENST00000555405 ATP5EP2Q5VTU8 51 aa5.75□□□□□ -1.49
NEK9-205ENST00000555405 PRR15Q8IV56 129 aa5.75□□□□□ -1.49
NEK9-205ENST00000555405 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
NEK9-205ENST00000555405 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
NEK9-205ENST00000555405 LINC00313P59037 77 aa5.73□□□□□ -1.49
NEK9-205ENST00000555405 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
NEK9-205ENST00000555405 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
NEK9-205ENST00000555405 HCG22E2RYF7 251 aa5.71□□□□□ -1.5
NEK9-205ENST00000555405 C8orf17Q9NRJ1 99 aa5.71□□□□□ -1.5
NEK9-205ENST00000555405 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
NEK9-205ENST00000555405 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
NEK9-205ENST00000555405 TNXBP22105 4242 aa5.69□□□□□ -1.5
NEK9-205ENST00000555405 Q5XG85 94 aa5.69□□□□□ -1.5
NEK9-205ENST00000555405 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
NEK9-205ENST00000555405 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
NEK9-205ENST00000555405 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
NEK9-205ENST00000555405 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
NEK9-205ENST00000555405 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
NEK9-205ENST00000555405 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
NEK9-205ENST00000555405 HERC1Q15751 4861 aa5.64□□□□□ -1.51
NEK9-205ENST00000555405 C8orf87E5RJ46 101 aa5.62□□□□□ -1.51
NEK9-205ENST00000555405 ATOX1O00244 68 aa5.6□□□□□ -1.51
NEK9-205ENST00000555405 FP248Q71RG6 208 aaPredicted RBP5.58□□□□□ -1.52
NEK9-205ENST00000555405 TMEM254Q8TBM7 123 aa5.58□□□□□ -1.52
NEK9-205ENST00000555405 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
NEK9-205ENST00000555405 LPAP08519 4548 aa5.56□□□□□ -1.52
NEK9-205ENST00000555405 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
NEK9-205ENST00000555405 LINC00208Q96KT6 92 aa5.55□□□□□ -1.52
NEK9-205ENST00000555405 LRP2P98164 4655 aa5.55□□□□□ -1.52
NEK9-205ENST00000555405 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
NEK9-205ENST00000555405 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
NEK9-205ENST00000555405 KRTAP13-3Q3SY46 172 aa5.55□□□□□ -1.52
NEK9-205ENST00000555405 H0Y9P7 68 aa5.54□□□□□ -1.52
NEK9-205ENST00000555405 Q5W150 140 aa5.54□□□□□ -1.52
NEK9-205ENST00000555405 SERP2Q8N6R1 65 aa5.53□□□□□ -1.52
NEK9-205ENST00000555405 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
NEK9-205ENST00000555405 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
NEK9-205ENST00000555405 TRAV7A0A075B6U4 112 aa5.53□□□□□ -1.52
NEK9-205ENST00000555405 XP32Q5T750 250 aa5.53□□□□□ -1.52
NEK9-205ENST00000555405 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
NEK9-205ENST00000555405 CCDC179H3BU77 68 aa5.52□□□□□ -1.53
NEK9-205ENST00000555405 MP68P56378 58 aa5.52□□□□□ -1.53
NEK9-205ENST00000555405 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
NEK9-205ENST00000555405 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
NEK9-205ENST00000555405 UQCRQO14949 82 aa5.49□□□□□ -1.53
NEK9-205ENST00000555405 Q8N9P0 234 aaPredicted RBP5.49□□□□□ -1.53
NEK9-205ENST00000555405 COX7CP15954 63 aa5.49□□□□□ -1.53
NEK9-205ENST00000555405 SMIM20Q8N5G0 67 aa5.49□□□□□ -1.53
NEK9-205ENST00000555405 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
NEK9-205ENST00000555405 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
NEK9-205ENST00000555405 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
NEK9-205ENST00000555405 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
NEK9-205ENST00000555405 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
NEK9-205ENST00000555405 A8MUU9 505 aa5.46□□□□□ -1.54
NEK9-205ENST00000555405 C20orf166-AS1Q96NR2 134 aa5.46□□□□□ -1.54
NEK9-205ENST00000555405 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
NEK9-205ENST00000555405 Q75L30 129 aa5.44□□□□□ -1.54
NEK9-205ENST00000555405 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
NEK9-205ENST00000555405 SPINK7P58062 85 aa5.41□□□□□ -1.54
NEK9-205ENST00000555405 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
NEK9-205ENST00000555405 A0A0U1RQV1 116 aa5.38□□□□□ -1.55
NEK9-205ENST00000555405 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
NEK9-205ENST00000555405 C7orf65Q6ZTY9 151 aa5.37□□□□□ -1.55
NEK9-205ENST00000555405 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
NEK9-205ENST00000555405 CYP4F30PQ9H0H9 118 aa5.37□□□□□ -1.55
NEK9-205ENST00000555405 LOC101927531A0A1B0GV80 90 aa5.36□□□□□ -1.55
NEK9-205ENST00000555405 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
NEK9-205ENST00000555405 MUC2Q02817 5179 aa5.34□□□□□ -1.55
NEK9-205ENST00000555405 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.56
NEK9-205ENST00000555405 HRES1P13985 223 aa5.33□□□□□ -1.56
NEK9-205ENST00000555405 FAM236DA0A1B0GTK5 79 aa5.32□□□□□ -1.56
NEK9-205ENST00000555405 FAM236CP0DP71 79 aa5.32□□□□□ -1.56
NEK9-205ENST00000555405 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
NEK9-205ENST00000555405 H3BPC8 53 aa5.31□□□□□ -1.56
NEK9-205ENST00000555405 H7BZZ5 65 aa5.3□□□□□ -1.56
NEK9-205ENST00000555405 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
NEK9-205ENST00000555405 COX6B2Q6YFQ2 88 aa5.27□□□□□ -1.57
NEK9-205ENST00000555405 NDUFC1O43677 76 aa5.25□□□□□ -1.57
NEK9-205ENST00000555405 RBM12B-AS1Q9P1G2 102 aa5.23□□□□□ -1.57
NEK9-205ENST00000555405 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
NEK9-205ENST00000555405 TMEM258P61165 79 aa5.19□□□□□ -1.58
NEK9-205ENST00000555405 ACYP2P14621 99 aa5.16□□□□□ -1.58
NEK9-205ENST00000555405 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.58
NEK9-205ENST00000555405 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
NEK9-205ENST00000555405 COA5Q86WW8 74 aa5.13□□□□□ -1.59
NEK9-205ENST00000555405 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
NEK9-205ENST00000555405 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
NEK9-205ENST00000555405 M0R2T5 61 aa5.1□□□□□ -1.59
NEK9-205ENST00000555405 LCE2BO14633 110 aa5.1□□□□□ -1.59
NEK9-205ENST00000555405 H1FX-AS1Q4G0G2 97 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms