RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 LOC400499M0QZD8 3231 aa4.99□□□□□ -1.61
SHE-203ENST00000555188 KRTAP11-1Q8IUC1 163 aa4.99□□□□□ -1.61
SHE-203ENST00000555188 KALRNO60229 2985 aa4.98□□□□□ -1.61
SHE-203ENST00000555188 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
SHE-203ENST00000555188 FLG2Q5D862 2391 aaPredicted RBP4.98□□□□□ -1.61
SHE-203ENST00000555188 ZNF292O60281 2723 aa4.96□□□□□ -1.62
SHE-203ENST00000555188 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
SHE-203ENST00000555188 ITPR1Q14643 2758 aa4.95□□□□□ -1.62
SHE-203ENST00000555188 M0QZ58 72 aa4.95□□□□□ -1.62
SHE-203ENST00000555188 TACC2O95359 2948 aa4.95□□□□□ -1.62
SHE-203ENST00000555188 LAMA5O15230 3695 aa4.95□□□□□ -1.62
SHE-203ENST00000555188 DMDP11532 3685 aa4.94□□□□□ -1.62
SHE-203ENST00000555188 DCHS1Q96JQ0 3298 aa4.92□□□□□ -1.62
SHE-203ENST00000555188 COL6A5A8TX70 2615 aa4.91□□□□□ -1.62
SHE-203ENST00000555188 RELNP78509 3460 aa4.9□□□□□ -1.62
SHE-203ENST00000555188 ASH1LQ9NR48 2969 aaKnown RBP4.9□□□□□ -1.63
SHE-203ENST00000555188 STAB1Q9NY15 2570 aa4.9□□□□□ -1.63
SHE-203ENST00000555188 IGSF10Q6WRI0 2623 aa4.89□□□□□ -1.63
SHE-203ENST00000555188 ZFHX4Q86UP3 3567 aa4.88□□□□□ -1.63
SHE-203ENST00000555188 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
SHE-203ENST00000555188 KRTAP13-1Q8IUC0 172 aa4.88□□□□□ -1.63
SHE-203ENST00000555188 MUC3AQ02505 3323 aa4.84□□□□□ -1.63
SHE-203ENST00000555188 ITPR2Q14571 2701 aa4.84□□□□□ -1.63
SHE-203ENST00000555188 ZZEF1O43149 2961 aa4.83□□□□□ -1.64
SHE-203ENST00000555188 STAB2Q8WWQ8 2551 aa4.83□□□□□ -1.64
SHE-203ENST00000555188 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
SHE-203ENST00000555188 H0YAA0 97 aa4.8□□□□□ -1.64
SHE-203ENST00000555188 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
SHE-203ENST00000555188 UBR5O95071 2799 aaPredicted RBP4.79□□□□□ -1.64
SHE-203ENST00000555188 UTP20O75691 2785 aaKnown RBP4.79□□□□□ -1.64
SHE-203ENST00000555188 APCP25054 2843 aa4.78□□□□□ -1.64
SHE-203ENST00000555188 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
SHE-203ENST00000555188 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
SHE-203ENST00000555188 NSD1Q96L73 2696 aaPredicted RBP4.75□□□□□ -1.65
SHE-203ENST00000555188 CSMD1Q96PZ7 3565 aa4.74□□□□□ -1.65
SHE-203ENST00000555188 P0C880 135 aa4.7□□□□□ -1.66
SHE-203ENST00000555188 ZFHX3Q15911 3703 aa4.68□□□□□ -1.66
SHE-203ENST00000555188 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
SHE-203ENST00000555188 SPENQ96T58 3664 aaKnown RBP4.66□□□□□ -1.66
SHE-203ENST00000555188 FLNCQ14315 2725 aa4.66□□□□□ -1.66
SHE-203ENST00000555188 SMG1Q96Q15 3661 aaKnown RBP4.65□□□□□ -1.66
SHE-203ENST00000555188 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
SHE-203ENST00000555188 KMT2BQ9UMN6 2715 aaPredicted RBP4.65□□□□□ -1.67
SHE-203ENST00000555188 CELSR2Q9HCU4 2923 aa4.65□□□□□ -1.67
SHE-203ENST00000555188 CUBNO60494 3623 aa4.63□□□□□ -1.67
SHE-203ENST00000555188 KRTAP21-3Q3LHN1 58 aa4.63□□□□□ -1.67
SHE-203ENST00000555188 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
SHE-203ENST00000555188 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
SHE-203ENST00000555188 SVEP1Q4LDE5 3571 aa4.61□□□□□ -1.67
SHE-203ENST00000555188 TNP1P09430 55 aa4.61□□□□□ -1.67
SHE-203ENST00000555188 KRTAP13-3Q3SY46 172 aa4.59□□□□□ -1.67
SHE-203ENST00000555188 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
SHE-203ENST00000555188 TENM4Q6N022 2769 aa4.57□□□□□ -1.68
SHE-203ENST00000555188 NIPBLQ6KC79 2804 aaeCLIP4.56□□□□□ -1.68
SHE-203ENST00000555188 DCHS2Q6V1P9 2916 aa4.56□□□□□ -1.68
SHE-203ENST00000555188 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
SHE-203ENST00000555188 FBN2P35556 2912 aa4.53□□□□□ -1.68
SHE-203ENST00000555188 ZANQ9Y493 2812 aa4.53□□□□□ -1.68
SHE-203ENST00000555188 CELSR1Q9NYQ6 3014 aa4.52□□□□□ -1.69
SHE-203ENST00000555188 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
SHE-203ENST00000555188 HRNRQ86YZ3 2850 aaPredicted RBP4.48□□□□□ -1.69
SHE-203ENST00000555188 TGP01266 2768 aa4.48□□□□□ -1.69
SHE-203ENST00000555188 BSNQ9UPA5 3926 aa4.47□□□□□ -1.69
SHE-203ENST00000555188 NF1P21359 2839 aa4.46□□□□□ -1.69
SHE-203ENST00000555188 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
SHE-203ENST00000555188 XP32Q5T750 250 aa4.43□□□□□ -1.7
SHE-203ENST00000555188 PKD1L1Q8TDX9 2849 aa4.42□□□□□ -1.7
SHE-203ENST00000555188 TENM1Q9UKZ4 2725 aa4.4□□□□□ -1.7
SHE-203ENST00000555188 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
SHE-203ENST00000555188 VWFP04275 2813 aa4.35□□□□□ -1.71
SHE-203ENST00000555188 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
SHE-203ENST00000555188 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
SHE-203ENST00000555188 VPS13CQ709C8 3753 aa4.33□□□□□ -1.72
SHE-203ENST00000555188 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
SHE-203ENST00000555188 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
SHE-203ENST00000555188 MXRA5Q9NR99 2828 aa4.29□□□□□ -1.72
SHE-203ENST00000555188 ANK3Q12955 4377 aaKnown RBP4.29□□□□□ -1.72
SHE-203ENST00000555188 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
SHE-203ENST00000555188 PDZD2O15018 2839 aa4.28□□□□□ -1.72
SHE-203ENST00000555188 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
SHE-203ENST00000555188 AKAP9Q99996 3911 aa4.27□□□□□ -1.73
SHE-203ENST00000555188 TRRAPQ9Y4A5 3859 aa4.26□□□□□ -1.73
SHE-203ENST00000555188 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
SHE-203ENST00000555188 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
SHE-203ENST00000555188 FBN1P35555 2871 aaKnown RBP4.22□□□□□ -1.73
SHE-203ENST00000555188 CSMD3Q7Z407 3707 aa4.2□□□□□ -1.74
SHE-203ENST00000555188 ZNF469Q96JG9 3925 aaPredicted RBP4.13□□□□□ -1.75
SHE-203ENST00000555188 KRTAP4-5Q9BYR2 181 aa4.11□□□□□ -1.75
SHE-203ENST00000555188 OTOGQ6ZRI0 2925 aa4.1□□□□□ -1.75
SHE-203ENST00000555188 INE1O15225 51 aa4.09□□□□□ -1.75
SHE-203ENST00000555188 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
SHE-203ENST00000555188 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
SHE-203ENST00000555188 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
SHE-203ENST00000555188 COL7A1Q02388 2944 aa4.06□□□□□ -1.76
SHE-203ENST00000555188 KRTAP3-3Q9BYR6 98 aa4.03□□□□□ -1.76
SHE-203ENST00000555188 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
SHE-203ENST00000555188 MEGF8Q7Z7M0 2845 aa3.99□□□□□ -1.77
SHE-203ENST00000555188 ANK2Q01484 3957 aa3.96□□□□□ -1.78
SHE-203ENST00000555188 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
SHE-203ENST00000555188 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms