RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 XAGE1AQ9HD64 81 aa3.34□□□□□ -1.87
ATXN3-226ENST00000554350 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 COX7CP15954 63 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 SPRR1AP35321 89 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 CXCL6P80162 114 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 C3orf22Q8N5N4 141 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 DHRS4-AS1Q9P1J3 65 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
ATXN3-226ENST00000554350 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
ATXN3-226ENST00000554350 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
ATXN3-226ENST00000554350 RETNLBQ9BQ08 111 aa3.32□□□□□ -1.88
ATXN3-226ENST00000554350 PKIGQ9Y2B9 76 aa3.32□□□□□ -1.88
ATXN3-226ENST00000554350 IGLV5-48A0A075B6I7 105 aa3.31□□□□□ -1.88
ATXN3-226ENST00000554350 LOC107984640A0A0U1RRK4 108 aa3.31□□□□□ -1.88
ATXN3-226ENST00000554350 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
ATXN3-226ENST00000554350 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
ATXN3-226ENST00000554350 NKAPP1Q8N9T2 125 aa3.31□□□□□ -1.88
ATXN3-226ENST00000554350 A0A087X002 238 aa3.3□□□□□ -1.88
ATXN3-226ENST00000554350 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-226ENST00000554350 M0R2T5 61 aa3.3□□□□□ -1.88
ATXN3-226ENST00000554350 DSCR10P59022 87 aa3.3□□□□□ -1.88
ATXN3-226ENST00000554350 C1orf137Q5JT78 98 aa3.3□□□□□ -1.88
ATXN3-226ENST00000554350 IGLV7-46A0A075B6I9 117 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 A0A096LNI7 61 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 IGKV3D-7A0A0C4DH55 119 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 MT1HP80294 61 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 TPRXLQ17RH7 258 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 Q6ZRX8 168 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 Q6ZVQ6 151 aa3.29□□□□□ -1.88
ATXN3-226ENST00000554350 H0Y9J4 135 aa3.28□□□□□ -1.88
ATXN3-226ENST00000554350 C9orf153Q5TBE3 101 aa3.28□□□□□ -1.88
ATXN3-226ENST00000554350 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
ATXN3-226ENST00000554350 LINC00474Q9P2X8 69 aa3.28□□□□□ -1.88
ATXN3-226ENST00000554350 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
ATXN3-226ENST00000554350 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-226ENST00000554350 ETDCA0A1B0GVM5 59 aa3.27□□□□□ -1.89
ATXN3-226ENST00000554350 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
ATXN3-226ENST00000554350 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
ATXN3-226ENST00000554350 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
ATXN3-226ENST00000554350 Q8N377 158 aa3.27□□□□□ -1.89
ATXN3-226ENST00000554350 TRAV7A0A075B6U4 112 aa3.26□□□□□ -1.89
ATXN3-226ENST00000554350 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
ATXN3-226ENST00000554350 IGLV8-61A0A075B6I0 122 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 A0A087WVE0 104 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 ERC2-IT1O76042 136 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 IGLV7-43P04211 117 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 TMEM258P61165 79 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 NREPQ16612 68 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 FAM19A1Q7Z5A9 133 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 Q9BRP9 147 aa3.25□□□□□ -1.89
ATXN3-226ENST00000554350 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
ATXN3-226ENST00000554350 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
ATXN3-226ENST00000554350 SPRR1BP22528 89 aa3.24□□□□□ -1.89
ATXN3-226ENST00000554350 Q8NBF4 154 aa3.24□□□□□ -1.89
ATXN3-226ENST00000554350 SS18L2Q9UHA2 77 aa3.24□□□□□ -1.89
ATXN3-226ENST00000554350 NDUFC1O43677 76 aa3.23□□□□□ -1.89
ATXN3-226ENST00000554350 KLKP1Q107X0 134 aa3.23□□□□□ -1.89
ATXN3-226ENST00000554350 A0A1W2PNM2 257 aa3.22□□□□□ -1.89
ATXN3-226ENST00000554350 FAM168BA1KXE4 195 aa3.22□□□□□ -1.89
ATXN3-226ENST00000554350 BPY2O14599 106 aa3.22□□□□□ -1.89
ATXN3-226ENST00000554350 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
ATXN3-226ENST00000554350 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
ATXN3-226ENST00000554350 TYMSOSQ8TAI1 123 aa3.22□□□□□ -1.89
ATXN3-226ENST00000554350 USH2AO75445 5202 aa3.21□□□□□ -1.89
ATXN3-226ENST00000554350 F8WEM9 126 aa3.21□□□□□ -1.9
ATXN3-226ENST00000554350 UBE2BP63146 152 aa3.21□□□□□ -1.9
ATXN3-226ENST00000554350 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
ATXN3-226ENST00000554350 FAM19A5Q7Z5A7 132 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-226ENST00000554350 A0A1W2PNN7 141 aa3.2□□□□□ -1.9
ATXN3-226ENST00000554350 J3KT08 172 aa3.2□□□□□ -1.9
ATXN3-226ENST00000554350 IGKV4-1P06312 121 aa3.2□□□□□ -1.9
ATXN3-226ENST00000554350 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
ATXN3-226ENST00000554350 DEFB105AQ8NG35 78 aa3.2□□□□□ -1.9
ATXN3-226ENST00000554350 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
ATXN3-226ENST00000554350 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-226ENST00000554350 ST20-AS1Q8NBB2 130 aa3.19□□□□□ -1.9
ATXN3-226ENST00000554350 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
ATXN3-226ENST00000554350 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
ATXN3-226ENST00000554350 C20orf197Q8N268 126 aa3.18□□□□□ -1.9
ATXN3-226ENST00000554350 OCR1Q9BZK8 76 aa3.18□□□□□ -1.9
ATXN3-226ENST00000554350 H7BZZ5 65 aa3.17□□□□□ -1.9
ATXN3-226ENST00000554350 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
ATXN3-226ENST00000554350 IGFL1Q6UW32 110 aa3.17□□□□□ -1.9
ATXN3-226ENST00000554350 KRTAP13-1Q8IUC0 172 aa3.17□□□□□ -1.9
ATXN3-226ENST00000554350 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
ATXN3-226ENST00000554350 NEBP20929 6669 aa3.17□□□□□ -1.9
ATXN3-226ENST00000554350 UBE2AP49459 152 aa3.16□□□□□ -1.9
ATXN3-226ENST00000554350 TMEM254Q8TBM7 123 aa3.16□□□□□ -1.9
ATXN3-226ENST00000554350 CYSTM1Q9H1C7 97 aa3.16□□□□□ -1.9
ATXN3-226ENST00000554350 FAM236DA0A1B0GTK5 79 aa3.15□□□□□ -1.91
ATXN3-226ENST00000554350 FAM236CP0DP71 79 aa3.15□□□□□ -1.91
ATXN3-226ENST00000554350 PRLHP81277 87 aa3.15□□□□□ -1.91
ATXN3-226ENST00000554350 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
ATXN3-226ENST00000554350 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
ATXN3-226ENST00000554350 HIGD2AQ9BW72 106 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms