RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 IGHV6-1A0A0B4J1U7 121 aa10.61□□□□□ -0.71
FOXA1-203ENST00000553751 PDE6GP18545 87 aa10.61□□□□□ -0.71
FOXA1-203ENST00000553751 A0A1B0GW54 56 aa10.59□□□□□ -0.71
FOXA1-203ENST00000553751 A0A1B0GVX0 72 aa10.58□□□□□ -0.72
FOXA1-203ENST00000553751 J3KT08 172 aa10.57□□□□□ -0.72
FOXA1-203ENST00000553751 H3BT86 120 aa10.56□□□□□ -0.72
FOXA1-203ENST00000553751 COX6B2Q6YFQ2 88 aa10.55□□□□□ -0.72
FOXA1-203ENST00000553751 MTURNQ8N3F0 131 aa10.55□□□□□ -0.72
FOXA1-203ENST00000553751 C8orf87E5RJ46 101 aa10.54□□□□□ -0.72
FOXA1-203ENST00000553751 KRTAP9-2Q9BYQ4 174 aa10.54□□□□□ -0.72
FOXA1-203ENST00000553751 FLGP20930 4061 aaPredicted RBP10.52□□□□□ -0.73
FOXA1-203ENST00000553751 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
FOXA1-203ENST00000553751 A8MWP4 228 aa10.46□□□□□ -0.73
FOXA1-203ENST00000553751 NDUFB1O75438 58 aa10.46□□□□□ -0.73
FOXA1-203ENST00000553751 COL5A1-AS1Q5SY13 56 aa10.46□□□□□ -0.73
FOXA1-203ENST00000553751 IGKV3D-7A0A0C4DH55 119 aa10.43□□□□□ -0.74
FOXA1-203ENST00000553751 NREPQ16612 68 aa10.43□□□□□ -0.74
FOXA1-203ENST00000553751 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
FOXA1-203ENST00000553751 C8orf17Q9NRJ1 99 aa10.41□□□□□ -0.74
FOXA1-203ENST00000553751 M0R2T5 61 aa10.39□□□□□ -0.75
FOXA1-203ENST00000553751 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
FOXA1-203ENST00000553751 KRTAP10-6P60371 365 aaPredicted RBP10.39□□□□□ -0.75
FOXA1-203ENST00000553751 PRR15Q8IV56 129 aa10.37□□□□□ -0.75
FOXA1-203ENST00000553751 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
FOXA1-203ENST00000553751 K7EP34 96 aa10.36□□□□□ -0.75
FOXA1-203ENST00000553751 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
FOXA1-203ENST00000553751 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
FOXA1-203ENST00000553751 HRES1P13985 223 aa10.32□□□□□ -0.76
FOXA1-203ENST00000553751 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
FOXA1-203ENST00000553751 Q6ZVQ6 151 aa10.32□□□□□ -0.76
FOXA1-203ENST00000553751 PCP4L1A6NKN8 68 aa10.31□□□□□ -0.76
FOXA1-203ENST00000553751 MPLKIPQ8TAP9 179 aa10.31□□□□□ -0.76
FOXA1-203ENST00000553751 MMP24-AS1A0A0U1RRL7 71 aa10.3□□□□□ -0.76
FOXA1-203ENST00000553751 K7EQZ3 153 aa10.3□□□□□ -0.76
FOXA1-203ENST00000553751 BPY2O14599 106 aa10.26□□□□□ -0.77
FOXA1-203ENST00000553751 TMEM254Q8TBM7 123 aa10.25□□□□□ -0.77
FOXA1-203ENST00000553751 MRPL34Q9BQ48 92 aaKnown RBP10.23□□□□□ -0.77
FOXA1-203ENST00000553751 RBM12B-AS1Q9P1G2 102 aa10.23□□□□□ -0.77
FOXA1-203ENST00000553751 FAM236DA0A1B0GTK5 79 aa10.22□□□□□ -0.77
FOXA1-203ENST00000553751 FAM236CP0DP71 79 aa10.22□□□□□ -0.77
FOXA1-203ENST00000553751 SPINK7P58062 85 aa10.22□□□□□ -0.77
FOXA1-203ENST00000553751 hDV103S1A0JD37 113 aa10.21□□□□□ -0.77
FOXA1-203ENST00000553751 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.77
FOXA1-203ENST00000553751 Q8N9L7 120 aa10.18□□□□□ -0.78
FOXA1-203ENST00000553751 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
FOXA1-203ENST00000553751 F8W1H4 67 aa10.14□□□□□ -0.79
FOXA1-203ENST00000553751 KRTAP9-6A0A140TA67 174 aa10.13□□□□□ -0.79
FOXA1-203ENST00000553751 UBL5Q9BZL1 73 aa10.13□□□□□ -0.79
FOXA1-203ENST00000553751 NDUFS5O43920 106 aa10.12□□□□□ -0.79
FOXA1-203ENST00000553751 WFDC13Q8IUB5 93 aa10.11□□□□□ -0.79
FOXA1-203ENST00000553751 FSIP2Q5CZC0 6907 aa10.11□□□□□ -0.79
FOXA1-203ENST00000553751 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
FOXA1-203ENST00000553751 CASC2Q6XLA1 102 aa10.09□□□□□ -0.79
FOXA1-203ENST00000553751 KRTAP9-8Q9BYQ0 159 aa10.07□□□□□ -0.8
FOXA1-203ENST00000553751 Q5W150 140 aa10.03□□□□□ -0.8
FOXA1-203ENST00000553751 HCG22E2RYF7 251 aa10.01□□□□□ -0.81
FOXA1-203ENST00000553751 CRCT1Q9UGL9 99 aa9.98□□□□□ -0.81
FOXA1-203ENST00000553751 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
FOXA1-203ENST00000553751 MT2AP02795 61 aa9.95□□□□□ -0.82
FOXA1-203ENST00000553751 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
FOXA1-203ENST00000553751 CXCL6P80162 114 aa9.95□□□□□ -0.82
FOXA1-203ENST00000553751 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
FOXA1-203ENST00000553751 MT1FP04733 61 aa9.88□□□□□ -0.83
FOXA1-203ENST00000553751 ACYP1P07311 99 aa9.85□□□□□ -0.83
FOXA1-203ENST00000553751 FAM240AA0A1B0GVK7 77 aa9.84□□□□□ -0.83
FOXA1-203ENST00000553751 USH2AO75445 5202 aa9.83□□□□□ -0.84
FOXA1-203ENST00000553751 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
FOXA1-203ENST00000553751 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
FOXA1-203ENST00000553751 KRTAP10-10P60014 251 aa9.79□□□□□ -0.84
FOXA1-203ENST00000553751 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
FOXA1-203ENST00000553751 A0A1B0GV90 55 aa9.76□□□□□ -0.85
FOXA1-203ENST00000553751 ATP5EP2Q5VTU8 51 aa9.75□□□□□ -0.85
FOXA1-203ENST00000553751 KRTAP9-3Q9BYQ3 159 aa9.75□□□□□ -0.85
FOXA1-203ENST00000553751 SSPOA2VEC9 5147 aa9.72□□□□□ -0.85
FOXA1-203ENST00000553751 LCE2BO14633 110 aa9.68□□□□□ -0.86
FOXA1-203ENST00000553751 KRTAP3-1Q9BYR8 98 aa9.66□□□□□ -0.86
FOXA1-203ENST00000553751 HIST1H4AP62805 103 aaKnown RBP9.65□□□□□ -0.86
FOXA1-203ENST00000553751 TRAV22A0A0B4J277 110 aa9.62□□□□□ -0.87
FOXA1-203ENST00000553751 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
FOXA1-203ENST00000553751 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
FOXA1-203ENST00000553751 A0A087WVE0 104 aa9.58□□□□□ -0.88
FOXA1-203ENST00000553751 CYP4F30PQ9H0H9 118 aa9.58□□□□□ -0.88
FOXA1-203ENST00000553751 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
FOXA1-203ENST00000553751 UQCRQO14949 82 aa9.53□□□□□ -0.88
FOXA1-203ENST00000553751 S4R3F8 94 aa9.53□□□□□ -0.88
FOXA1-203ENST00000553751 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
FOXA1-203ENST00000553751 LCA10Q71F78 164 aa9.49□□□□□ -0.89
FOXA1-203ENST00000553751 H0Y9P7 68 aa9.48□□□□□ -0.89
FOXA1-203ENST00000553751 ATOX1O00244 68 aa9.47□□□□□ -0.89
FOXA1-203ENST00000553751 J3QR89 54 aa9.45□□□□□ -0.9
FOXA1-203ENST00000553751 KRTAP19-1Q8IUB9 90 aa9.44□□□□□ -0.9
FOXA1-203ENST00000553751 FCGBPQ9Y6R7 5405 aaPredicted RBP9.43□□□□□ -0.9
FOXA1-203ENST00000553751 CSAG1Q6PB30 78 aa9.43□□□□□ -0.9
FOXA1-203ENST00000553751 OCR1Q9BZK8 76 aa9.4□□□□□ -0.9
FOXA1-203ENST00000553751 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
FOXA1-203ENST00000553751 FAM236AA0A1B0GUQ0 79 aa9.33□□□□□ -0.92
FOXA1-203ENST00000553751 FAM236BA0A1B0GV22 79 aa9.33□□□□□ -0.92
FOXA1-203ENST00000553751 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
FOXA1-203ENST00000553751 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
FOXA1-203ENST00000553751 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms