RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ANK2Q01484 3957 aa1.11□□□□□ -2.23
TDP1-207ENST00000553617 FRYQ5TBA9 3013 aa1.11□□□□□ -2.23
TDP1-207ENST00000553617 UNC80Q8N2C7 3258 aa1.11□□□□□ -2.23
TDP1-207ENST00000553617 HMCN1Q96RW7 5635 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 MKI67P46013 3256 aaKnown RBP1.1□□□□□ -2.23
TDP1-207ENST00000553617 CFAP47Q6ZTR5 3102 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 NBASA2RRP1 2371 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 WNK1Q9H4A3 2382 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 CRCT1Q9UGL9 99 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 U3KQA8 63 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 NAV2Q8IVL1 2488 aa1.1□□□□□ -2.23
TDP1-207ENST00000553617 CHD8Q9HCK8 2581 aa1.09□□□□□ -2.23
TDP1-207ENST00000553617 FBN2P35556 2912 aa1.09□□□□□ -2.23
TDP1-207ENST00000553617 COL6A5A8TX70 2615 aa1.09□□□□□ -2.23
TDP1-207ENST00000553617 ZZEF1O43149 2961 aa1.09□□□□□ -2.23
TDP1-207ENST00000553617 RANBP2P49792 3224 aaKnown RBP1.09□□□□□ -2.23
TDP1-207ENST00000553617 VPS13AQ96RL7 3174 aa1.09□□□□□ -2.24
TDP1-207ENST00000553617 WDR87Q6ZQQ6 2873 aa1.09□□□□□ -2.24
TDP1-207ENST00000553617 H3BUX3 64 aa1.08□□□□□ -2.24
TDP1-207ENST00000553617 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
TDP1-207ENST00000553617 NF1P21359 2839 aa1.08□□□□□ -2.24
TDP1-207ENST00000553617 SETD2Q9BYW2 2564 aaPredicted RBP1.07□□□□□ -2.24
TDP1-207ENST00000553617 SPTBN4Q9H254 2564 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 FAM186AA6NE01 2351 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 NBEAQ8NFP9 2946 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 WDFY4Q6ZS81 3184 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 USP34Q70CQ2 3546 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 DCHS1Q96JQ0 3298 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
TDP1-207ENST00000553617 DMBT1Q9UGM3 2413 aaPredicted RBP1.07□□□□□ -2.24
TDP1-207ENST00000553617 NCOR1O75376 2440 aa1.06□□□□□ -2.24
TDP1-207ENST00000553617 CEP250Q9BV73 2442 aa1.06□□□□□ -2.24
TDP1-207ENST00000553617 MAP1BP46821 2468 aaKnown RBP1.06□□□□□ -2.24
TDP1-207ENST00000553617 M0QZ58 72 aa1.06□□□□□ -2.24
TDP1-207ENST00000553617 CCDC168Q8NDH2 2452 aa1.06□□□□□ -2.24
TDP1-207ENST00000553617 SPEGQ15772 3267 aa1.06□□□□□ -2.24
TDP1-207ENST00000553617 XIRP2A4UGR9 3374 aa1.05□□□□□ -2.24
TDP1-207ENST00000553617 DNAH11Q96DT5 4516 aa1.05□□□□□ -2.24
TDP1-207ENST00000553617 DEFB135Q30KP9 77 aa1.05□□□□□ -2.24
TDP1-207ENST00000553617 FLNCQ14315 2725 aa1.05□□□□□ -2.24
TDP1-207ENST00000553617 FBN3Q75N90 2809 aa1.05□□□□□ -2.24
TDP1-207ENST00000553617 FRYLO94915 3013 aa1.05□□□□□ -2.24
TDP1-207ENST00000553617 BOD1L1Q8NFC6 3051 aa1.04□□□□□ -2.24
TDP1-207ENST00000553617 DEFB136Q30KP8 78 aa1.04□□□□□ -2.24
TDP1-207ENST00000553617 USP24Q9UPU5 2620 aa1.04□□□□□ -2.24
TDP1-207ENST00000553617 BSNQ9UPA5 3926 aa1.04□□□□□ -2.24
TDP1-207ENST00000553617 EPG5Q9HCE0 2579 aa1.03□□□□□ -2.24
TDP1-207ENST00000553617 COL12A1Q99715 3063 aa1.03□□□□□ -2.24
TDP1-207ENST00000553617 PRKDCP78527 4128 aaKnown RBP1.03□□□□□ -2.24
TDP1-207ENST00000553617 GCN1Q92616 2671 aaKnown RBP1.03□□□□□ -2.24
TDP1-207ENST00000553617 PRUNE2Q8WUY3 3088 aa1.03□□□□□ -2.24
TDP1-207ENST00000553617 DMDP11532 3685 aa1.03□□□□□ -2.25
TDP1-207ENST00000553617 DNAH14Q0VDD8 3507 aa1.02□□□□□ -2.25
TDP1-207ENST00000553617 LYSTQ99698 3801 aa1.02□□□□□ -2.25
TDP1-207ENST00000553617 TRIOO75962 3097 aa1.02□□□□□ -2.25
TDP1-207ENST00000553617 RIF1Q5UIP0 2472 aaKnown RBP1.02□□□□□ -2.25
TDP1-207ENST00000553617 ZFHX4Q86UP3 3567 aa1.02□□□□□ -2.25
TDP1-207ENST00000553617 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
TDP1-207ENST00000553617 KALRNO60229 2985 aa1.01□□□□□ -2.25
TDP1-207ENST00000553617 USP9YO00507 2555 aaPredicted RBP1.01□□□□□ -2.25
TDP1-207ENST00000553617 A0A096LPF7 62 aa1.01□□□□□ -2.25
TDP1-207ENST00000553617 DNAH12Q6ZR08 3092 aa1.01□□□□□ -2.25
TDP1-207ENST00000553617 TACC2O95359 2948 aa1.01□□□□□ -2.25
TDP1-207ENST00000553617 TENM1Q9UKZ4 2725 aa1.01□□□□□ -2.25
TDP1-207ENST00000553617 VPS13DQ5THJ4 4388 aa1□□□□□ -2.25
TDP1-207ENST00000553617 ITPR3Q14573 2671 aa1□□□□□ -2.25
TDP1-207ENST00000553617 H3BNG1 76 aa1□□□□□ -2.25
TDP1-207ENST00000553617 M0R2T5 61 aa1□□□□□ -2.25
TDP1-207ENST00000553617 WDFY3Q8IZQ1 3526 aa1□□□□□ -2.25
TDP1-207ENST00000553617 SETXQ7Z333 2677 aaKnown RBP1□□□□□ -2.25
TDP1-207ENST00000553617 FREM2Q5SZK8 3169 aa1□□□□□ -2.25
TDP1-207ENST00000553617 APC2O95996 2303 aa0.99□□□□□ -2.25
TDP1-207ENST00000553617 DMXL1Q9Y485 3027 aa0.99□□□□□ -2.25
TDP1-207ENST00000553617 HTN3P15516 51 aa0.99□□□□□ -2.25
TDP1-207ENST00000553617 SACSQ9NZJ4 4579 aa0.99□□□□□ -2.25
TDP1-207ENST00000553617 HIVEP3Q5T1R4 2406 aa0.99□□□□□ -2.25
TDP1-207ENST00000553617 VCANP13611 3396 aa0.99□□□□□ -2.25
TDP1-207ENST00000553617 AKAP9Q99996 3911 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 LAMA2P24043 3122 aaKnown RBP0.98□□□□□ -2.25
TDP1-207ENST00000553617 NBEAL2Q6ZNJ1 2754 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 CSMD1Q96PZ7 3565 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 A0A096LNI7 61 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 DEFB124Q8NES8 71 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 EP400Q96L91 3159 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 LRRK2Q5S007 2527 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 UTP20O75691 2785 aaKnown RBP0.98□□□□□ -2.25
TDP1-207ENST00000553617 SPENQ96T58 3664 aaKnown RBP0.98□□□□□ -2.25
TDP1-207ENST00000553617 LAMA3Q16787 3333 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 C5orf42Q9H799 3197 aa0.98□□□□□ -2.25
TDP1-207ENST00000553617 HTTP42858 3142 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 CELSR3Q9NYQ7 3312 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 SPART-AS1P0CW21 52 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 SMR3AQ99954 134 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 FAT2Q9NYQ8 4349 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 RELNP78509 3460 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 UNC79Q9P2D8 2635 aa0.97□□□□□ -2.25
TDP1-207ENST00000553617 MYCBP2O75592 4640 aa0.96□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms