RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 PSPHP1O15172 72 aa3.16□□□□□ -1.9
TMEM55B-204ENST00000553602 CD164Q04900 197 aa3.16□□□□□ -1.9
TMEM55B-204ENST00000553602 PRR4Q16378 134 aa3.16□□□□□ -1.9
TMEM55B-204ENST00000553602 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
TMEM55B-204ENST00000553602 COA5Q86WW8 74 aa3.16□□□□□ -1.9
TMEM55B-204ENST00000553602 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
TMEM55B-204ENST00000553602 MRPL34Q9BQ48 92 aaKnown RBP3.15□□□□□ -1.91
TMEM55B-204ENST00000553602 KRTAP4-5Q9BYR2 181 aa3.15□□□□□ -1.91
TMEM55B-204ENST00000553602 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
TMEM55B-204ENST00000553602 NOTCH1P46531 2555 aa3.15□□□□□ -1.91
TMEM55B-204ENST00000553602 TRRAPQ9Y4A5 3859 aa3.14□□□□□ -1.91
TMEM55B-204ENST00000553602 A0A087WTM6 91 aa3.14□□□□□ -1.91
TMEM55B-204ENST00000553602 C8orf87E5RJ46 101 aa3.14□□□□□ -1.91
TMEM55B-204ENST00000553602 PANO1I0J062 215 aa3.14□□□□□ -1.91
TMEM55B-204ENST00000553602 CDK2AP2O75956 126 aa3.14□□□□□ -1.91
TMEM55B-204ENST00000553602 PRB2P02812 416 aaPredicted RBP3.14□□□□□ -1.91
TMEM55B-204ENST00000553602 CHKB-CPT1BH3BT56 60 aa3.13□□□□□ -1.91
TMEM55B-204ENST00000553602 ZNF861PO60384 105 aa3.13□□□□□ -1.91
TMEM55B-204ENST00000553602 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
TMEM55B-204ENST00000553602 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
TMEM55B-204ENST00000553602 ATP11AUNQ6ZP68 121 aa3.13□□□□□ -1.91
TMEM55B-204ENST00000553602 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
TMEM55B-204ENST00000553602 IGLV9-49A0A0B4J1Y8 123 aa3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 PSORS1C2Q9UIG4 136 aa3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 CMYA5Q8N3K9 4069 aa3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 PKD1L1Q8TDX9 2849 aa3.12□□□□□ -1.91
TMEM55B-204ENST00000553602 IGHV6-1A0A0B4J1U7 121 aa3.11□□□□□ -1.91
TMEM55B-204ENST00000553602 RTL8CO15255 209 aa3.11□□□□□ -1.91
TMEM55B-204ENST00000553602 DNAH3Q8TD57 4116 aa3.1□□□□□ -1.91
TMEM55B-204ENST00000553602 NDUFS5O43920 106 aa3.1□□□□□ -1.91
TMEM55B-204ENST00000553602 HRES1P13985 223 aa3.1□□□□□ -1.91
TMEM55B-204ENST00000553602 SSBP3-AS1Q7Z2R9 100 aa3.1□□□□□ -1.91
TMEM55B-204ENST00000553602 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
TMEM55B-204ENST00000553602 A6NED7 52 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 IGLV7-43P04211 117 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 SEC61GP60059 68 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 PCOTHQ58A44 107 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 LCA10Q71F78 164 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 DMAC1Q96GE9 116 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.91
TMEM55B-204ENST00000553602 PRKDCP78527 4128 aaKnown RBP3.08□□□□□ -1.92
TMEM55B-204ENST00000553602 A6NN06 94 aa3.08□□□□□ -1.92
TMEM55B-204ENST00000553602 PRR26Q8N8Z3 221 aa3.08□□□□□ -1.92
TMEM55B-204ENST00000553602 TGP01266 2768 aa3.07□□□□□ -1.92
TMEM55B-204ENST00000553602 A0A087X002 238 aa3.07□□□□□ -1.92
TMEM55B-204ENST00000553602 ACYP2P14621 99 aa3.07□□□□□ -1.92
TMEM55B-204ENST00000553602 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
TMEM55B-204ENST00000553602 STAB2Q8WWQ8 2551 aa3.06□□□□□ -1.92
TMEM55B-204ENST00000553602 A8MU10 97 aa3.05□□□□□ -1.92
TMEM55B-204ENST00000553602 Q5W150 140 aa3.05□□□□□ -1.92
TMEM55B-204ENST00000553602 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
TMEM55B-204ENST00000553602 IGKV2-30P06310 120 aa3.04□□□□□ -1.92
TMEM55B-204ENST00000553602 C1orf134Q5TEV5 83 aa3.04□□□□□ -1.92
TMEM55B-204ENST00000553602 C7orf65Q6ZTY9 151 aa3.04□□□□□ -1.92
TMEM55B-204ENST00000553602 LINC00313P59037 77 aa3.03□□□□□ -1.92
TMEM55B-204ENST00000553602 Q6ZSA8 131 aa3.03□□□□□ -1.92
TMEM55B-204ENST00000553602 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
TMEM55B-204ENST00000553602 SPINK7P58062 85 aa3.02□□□□□ -1.93
TMEM55B-204ENST00000553602 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
TMEM55B-204ENST00000553602 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
TMEM55B-204ENST00000553602 ANAPC11Q9NYG5 84 aa3.02□□□□□ -1.93
TMEM55B-204ENST00000553602 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
TMEM55B-204ENST00000553602 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
TMEM55B-204ENST00000553602 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
TMEM55B-204ENST00000553602 SPINK6Q6UWN8 80 aa3.01□□□□□ -1.93
TMEM55B-204ENST00000553602 TENM2Q9NT68 2774 aa3□□□□□ -1.93
TMEM55B-204ENST00000553602 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
TMEM55B-204ENST00000553602 SPATA8Q6RVD6 105 aa2.99□□□□□ -1.93
TMEM55B-204ENST00000553602 IGKV2D-30A0A075B6S6 120 aa2.98□□□□□ -1.93
TMEM55B-204ENST00000553602 A0A1B0GU69 56 aa2.98□□□□□ -1.93
TMEM55B-204ENST00000553602 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
TMEM55B-204ENST00000553602 RBM12B-AS1Q9P1G2 102 aa2.98□□□□□ -1.93
TMEM55B-204ENST00000553602 SPINK1P00995 79 aa2.97□□□□□ -1.93
TMEM55B-204ENST00000553602 DYNC2H1Q8NCM8 4307 aaKnown RBP2.97□□□□□ -1.93
TMEM55B-204ENST00000553602 COL7A1Q02388 2944 aa2.96□□□□□ -1.93
TMEM55B-204ENST00000553602 UQCR11O14957 56 aa2.96□□□□□ -1.94
TMEM55B-204ENST00000553602 SRRM2Q9UQ35 2752 aaKnown RBP2.96□□□□□ -1.94
TMEM55B-204ENST00000553602 DNAH9Q9NYC9 4486 aa2.95□□□□□ -1.94
TMEM55B-204ENST00000553602 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
TMEM55B-204ENST00000553602 DNAH7Q8WXX0 4024 aa2.93□□□□□ -1.94
TMEM55B-204ENST00000553602 LY6G6CO95867 125 aa2.92□□□□□ -1.94
TMEM55B-204ENST00000553602 KRTAP10-1P60331 282 aa2.92□□□□□ -1.94
TMEM55B-204ENST00000553602 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
TMEM55B-204ENST00000553602 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
TMEM55B-204ENST00000553602 TYMSOSQ8TAI1 123 aa2.91□□□□□ -1.94
TMEM55B-204ENST00000553602 C20orf166-AS1Q96NR2 134 aa2.9□□□□□ -1.95
TMEM55B-204ENST00000553602 DNAH10Q8IVF4 4471 aa2.9□□□□□ -1.95
TMEM55B-204ENST00000553602 A8MUU9 505 aa2.89□□□□□ -1.95
TMEM55B-204ENST00000553602 LINC00304Q8N9R0 145 aa2.89□□□□□ -1.95
TMEM55B-204ENST00000553602 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
TMEM55B-204ENST00000553602 LYSTQ99698 3801 aa2.89□□□□□ -1.95
TMEM55B-204ENST00000553602 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
TMEM55B-204ENST00000553602 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
TMEM55B-204ENST00000553602 VPS13DQ5THJ4 4388 aa2.88□□□□□ -1.95
TMEM55B-204ENST00000553602 RETNLBQ9BQ08 111 aa2.87□□□□□ -1.95
TMEM55B-204ENST00000553602 RYR2Q92736 4967 aa2.86□□□□□ -1.95
TMEM55B-204ENST00000553602 LINC01554Q52M75 96 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms