RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 MMP24-AS1A0A0U1RRL7 71 aa7.24□□□□□ -1.25
CACNB3-223ENST00000552480 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
CACNB3-223ENST00000552480 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
CACNB3-223ENST00000552480 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
CACNB3-223ENST00000552480 KRTAP29-1A8MX34 341 aaPredicted RBP7.22□□□□□ -1.25
CACNB3-223ENST00000552480 CASC2Q6XLA1 102 aa7.22□□□□□ -1.25
CACNB3-223ENST00000552480 WFDC13Q8IUB5 93 aa7.22□□□□□ -1.25
CACNB3-223ENST00000552480 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
CACNB3-223ENST00000552480 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
CACNB3-223ENST00000552480 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
CACNB3-223ENST00000552480 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
CACNB3-223ENST00000552480 COX7CP15954 63 aa7.19□□□□□ -1.26
CACNB3-223ENST00000552480 OCR1Q9BZK8 76 aa7.18□□□□□ -1.26
CACNB3-223ENST00000552480 UQCRQO14949 82 aa7.17□□□□□ -1.26
CACNB3-223ENST00000552480 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
CACNB3-223ENST00000552480 TMEM254Q8TBM7 123 aa7.16□□□□□ -1.26
CACNB3-223ENST00000552480 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
CACNB3-223ENST00000552480 OXTP01178 125 aa7.14□□□□□ -1.27
CACNB3-223ENST00000552480 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
CACNB3-223ENST00000552480 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
CACNB3-223ENST00000552480 LINC00313P59037 77 aa7.13□□□□□ -1.27
CACNB3-223ENST00000552480 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
CACNB3-223ENST00000552480 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
CACNB3-223ENST00000552480 TNXBP22105 4242 aa7.11□□□□□ -1.27
CACNB3-223ENST00000552480 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
CACNB3-223ENST00000552480 RETNLBQ9BQ08 111 aa7.08□□□□□ -1.28
CACNB3-223ENST00000552480 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
CACNB3-223ENST00000552480 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
CACNB3-223ENST00000552480 LRP1Q07954 4544 aaKnown RBP7.07□□□□□ -1.28
CACNB3-223ENST00000552480 KRTAP16-1A8MUX0 517 aa7.06□□□□□ -1.28
CACNB3-223ENST00000552480 NDUFS5O43920 106 aa7.06□□□□□ -1.28
CACNB3-223ENST00000552480 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
CACNB3-223ENST00000552480 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
CACNB3-223ENST00000552480 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
CACNB3-223ENST00000552480 A0A0U1RQV1 116 aa7.03□□□□□ -1.28
CACNB3-223ENST00000552480 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CACNB3-223ENST00000552480 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
CACNB3-223ENST00000552480 H0Y9P7 68 aa7.02□□□□□ -1.29
CACNB3-223ENST00000552480 MP68P56378 58 aa7.02□□□□□ -1.29
CACNB3-223ENST00000552480 TRAV22A0A0B4J277 110 aa7.01□□□□□ -1.29
CACNB3-223ENST00000552480 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
CACNB3-223ENST00000552480 H3BPC8 53 aa7□□□□□ -1.29
CACNB3-223ENST00000552480 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
CACNB3-223ENST00000552480 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
CACNB3-223ENST00000552480 ZCCHC13Q8WW36 166 aaKnown RBP6.98□□□□□ -1.29
CACNB3-223ENST00000552480 NDUFC1O43677 76 aa6.96□□□□□ -1.3
CACNB3-223ENST00000552480 LINC00208Q96KT6 92 aa6.96□□□□□ -1.3
CACNB3-223ENST00000552480 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
CACNB3-223ENST00000552480 J3QL48 77 aa6.95□□□□□ -1.3
CACNB3-223ENST00000552480 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
CACNB3-223ENST00000552480 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
CACNB3-223ENST00000552480 Q5W150 140 aa6.94□□□□□ -1.3
CACNB3-223ENST00000552480 C1orf64Q8NEQ6 169 aa6.94□□□□□ -1.3
CACNB3-223ENST00000552480 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
CACNB3-223ENST00000552480 A8MUU9 505 aa6.93□□□□□ -1.3
CACNB3-223ENST00000552480 H7BZZ5 65 aa6.93□□□□□ -1.3
CACNB3-223ENST00000552480 TMEM258P61165 79 aa6.91□□□□□ -1.3
CACNB3-223ENST00000552480 HERC1Q15751 4861 aa6.9□□□□□ -1.3
CACNB3-223ENST00000552480 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
CACNB3-223ENST00000552480 PRR4Q16378 134 aa6.9□□□□□ -1.3
CACNB3-223ENST00000552480 Q75L30 129 aa6.88□□□□□ -1.31
CACNB3-223ENST00000552480 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
CACNB3-223ENST00000552480 FAM236DA0A1B0GTK5 79 aa6.84□□□□□ -1.31
CACNB3-223ENST00000552480 FAM236CP0DP71 79 aa6.84□□□□□ -1.31
CACNB3-223ENST00000552480 TPRXLQ17RH7 258 aa6.84□□□□□ -1.31
CACNB3-223ENST00000552480 XP32Q5T750 250 aa6.84□□□□□ -1.31
CACNB3-223ENST00000552480 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
CACNB3-223ENST00000552480 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
CACNB3-223ENST00000552480 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
CACNB3-223ENST00000552480 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
CACNB3-223ENST00000552480 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
CACNB3-223ENST00000552480 SPANXA2-OT1Q8N9U9 137 aa6.79□□□□□ -1.32
CACNB3-223ENST00000552480 IGKV2D-30A0A075B6S6 120 aa6.78□□□□□ -1.32
CACNB3-223ENST00000552480 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
CACNB3-223ENST00000552480 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
CACNB3-223ENST00000552480 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
CACNB3-223ENST00000552480 HRES1P13985 223 aa6.72□□□□□ -1.33
CACNB3-223ENST00000552480 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
CACNB3-223ENST00000552480 SPINK7P58062 85 aa6.69□□□□□ -1.34
CACNB3-223ENST00000552480 RPS28P62857 69 aaKnown RBP6.67□□□□□ -1.34
CACNB3-223ENST00000552480 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
CACNB3-223ENST00000552480 SEC61BP60468 96 aaKnown RBP6.6□□□□□ -1.35
CACNB3-223ENST00000552480 ACYP2P14621 99 aa6.59□□□□□ -1.35
CACNB3-223ENST00000552480 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
CACNB3-223ENST00000552480 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
CACNB3-223ENST00000552480 COA5Q86WW8 74 aa6.58□□□□□ -1.36
CACNB3-223ENST00000552480 LPAP08519 4548 aa6.58□□□□□ -1.36
CACNB3-223ENST00000552480 A8MUN3 132 aa6.57□□□□□ -1.36
CACNB3-223ENST00000552480 COX6B2Q6YFQ2 88 aa6.54□□□□□ -1.36
CACNB3-223ENST00000552480 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
CACNB3-223ENST00000552480 LRP2P98164 4655 aa6.51□□□□□ -1.37
CACNB3-223ENST00000552480 SMIM26A0A096LP01 95 aa6.51□□□□□ -1.37
CACNB3-223ENST00000552480 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
CACNB3-223ENST00000552480 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
CACNB3-223ENST00000552480 MPLKIPQ8TAP9 179 aa6.48□□□□□ -1.37
CACNB3-223ENST00000552480 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
CACNB3-223ENST00000552480 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
CACNB3-223ENST00000552480 RBM12B-AS1Q9P1G2 102 aa6.44□□□□□ -1.38
CACNB3-223ENST00000552480 Q1T7F1 81 aa6.38□□□□□ -1.39
CACNB3-223ENST00000552480 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms