RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 AKAP6Q13023 2319 aa1.87□□□□□ -2.11
USP44-208ENST00000552440 PIN1P1O15428 100 aa1.87□□□□□ -2.11
USP44-208ENST00000552440 TENM1Q9UKZ4 2725 aa1.87□□□□□ -2.11
USP44-208ENST00000552440 ABCA1O95477 2261 aa1.87□□□□□ -2.11
USP44-208ENST00000552440 RPL37P61927 97 aaKnown RBP1.87□□□□□ -2.11
USP44-208ENST00000552440 SSBP3-AS1Q7Z2R9 100 aa1.87□□□□□ -2.11
USP44-208ENST00000552440 UBL5Q9BZL1 73 aa1.86□□□□□ -2.11
USP44-208ENST00000552440 CACNA1CQ13936 2221 aa1.86□□□□□ -2.11
USP44-208ENST00000552440 VWFP04275 2813 aa1.86□□□□□ -2.11
USP44-208ENST00000552440 COX7BP24311 80 aa1.85□□□□□ -2.11
USP44-208ENST00000552440 NCBP2-AS2Q69YL0 99 aa1.85□□□□□ -2.11
USP44-208ENST00000552440 RYR2Q92736 4967 aa1.85□□□□□ -2.11
USP44-208ENST00000552440 HRNRQ86YZ3 2850 aaPredicted RBP1.85□□□□□ -2.11
USP44-208ENST00000552440 FCER1GP30273 86 aa1.84□□□□□ -2.11
USP44-208ENST00000552440 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
USP44-208ENST00000552440 HERC2O95714 4834 aa1.84□□□□□ -2.11
USP44-208ENST00000552440 TENM3Q9P273 2699 aa1.83□□□□□ -2.12
USP44-208ENST00000552440 NDUFA4O00483 81 aa1.83□□□□□ -2.12
USP44-208ENST00000552440 STATHP02808 62 aa1.83□□□□□ -2.12
USP44-208ENST00000552440 USF3Q68DE3 2245 aa1.83□□□□□ -2.12
USP44-208ENST00000552440 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
USP44-208ENST00000552440 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
USP44-208ENST00000552440 CMYA5Q8N3K9 4069 aa1.81□□□□□ -2.12
USP44-208ENST00000552440 TOMM5Q8N4H5 51 aa1.8□□□□□ -2.12
USP44-208ENST00000552440 K7EMI3 77 aa1.8□□□□□ -2.12
USP44-208ENST00000552440 UBE2DNLQ8IWF7 75 aa1.8□□□□□ -2.12
USP44-208ENST00000552440 COX14Q96I36 57 aa1.8□□□□□ -2.12
USP44-208ENST00000552440 ROS1P08922 2347 aa1.79□□□□□ -2.12
USP44-208ENST00000552440 PRH1P02810 166 aa1.79□□□□□ -2.12
USP44-208ENST00000552440 COL7A1Q02388 2944 aa1.79□□□□□ -2.12
USP44-208ENST00000552440 DNAH1Q9P2D7 4330 aa1.79□□□□□ -2.12
USP44-208ENST00000552440 DEFB108AA8MXU0 73 aa1.78□□□□□ -2.12
USP44-208ENST00000552440 CADP27708 2225 aa1.78□□□□□ -2.12
USP44-208ENST00000552440 KRTAP10-10P60014 251 aa1.78□□□□□ -2.12
USP44-208ENST00000552440 RPL38P63173 70 aaKnown RBP1.78□□□□□ -2.12
USP44-208ENST00000552440 TENM2Q9NT68 2774 aa1.78□□□□□ -2.13
USP44-208ENST00000552440 CPSF4LA6NMK7 179 aaKnown RBP1.77□□□□□ -2.13
USP44-208ENST00000552440 SACSQ9NZJ4 4579 aa1.77□□□□□ -2.13
USP44-208ENST00000552440 DEFB106AQ8N104 65 aa1.77□□□□□ -2.13
USP44-208ENST00000552440 NMES1Q9C002 83 aa1.77□□□□□ -2.13
USP44-208ENST00000552440 DYNC2H1Q8NCM8 4307 aaKnown RBP1.76□□□□□ -2.13
USP44-208ENST00000552440 KCNQ1DNQ9H478 68 aa1.76□□□□□ -2.13
USP44-208ENST00000552440 CMC2Q9NRP2 79 aa1.76□□□□□ -2.13
USP44-208ENST00000552440 ABCA13Q86UQ4 5058 aa1.75□□□□□ -2.13
USP44-208ENST00000552440 LYSTQ99698 3801 aa1.75□□□□□ -2.13
USP44-208ENST00000552440 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
USP44-208ENST00000552440 K7EIL1 84 aa1.75□□□□□ -2.13
USP44-208ENST00000552440 DEFB114Q30KQ6 69 aa1.75□□□□□ -2.13
USP44-208ENST00000552440 HERC1Q15751 4861 aa1.74□□□□□ -2.13
USP44-208ENST00000552440 M0R1W7 72 aa1.74□□□□□ -2.13
USP44-208ENST00000552440 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
USP44-208ENST00000552440 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
USP44-208ENST00000552440 CSMD3Q7Z407 3707 aa1.73□□□□□ -2.13
USP44-208ENST00000552440 ARL14EPLP0DKL9 152 aa1.73□□□□□ -2.13
USP44-208ENST00000552440 SERF2P84101 59 aa1.73□□□□□ -2.13
USP44-208ENST00000552440 DEFB110Q30KQ9 67 aa1.73□□□□□ -2.13
USP44-208ENST00000552440 ETDCA0A1B0GVM5 59 aa1.73□□□□□ -2.13
USP44-208ENST00000552440 STAB2Q8WWQ8 2551 aa1.72□□□□□ -2.13
USP44-208ENST00000552440 IGIPA6NJ69 53 aa1.72□□□□□ -2.13
USP44-208ENST00000552440 PLNP26678 52 aa1.72□□□□□ -2.13
USP44-208ENST00000552440 FXYD6P3P58550 94 aa1.72□□□□□ -2.13
USP44-208ENST00000552440 ABRACLQ9P1F3 81 aa1.71□□□□□ -2.14
USP44-208ENST00000552440 DNAH9Q9NYC9 4486 aa1.71□□□□□ -2.14
USP44-208ENST00000552440 FRAS1Q86XX4 4008 aa1.71□□□□□ -2.14
USP44-208ENST00000552440 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
USP44-208ENST00000552440 I3L3M4 83 aa1.7□□□□□ -2.14
USP44-208ENST00000552440 CRIPTQ9P021 101 aa1.7□□□□□ -2.14
USP44-208ENST00000552440 DNAH7Q8WXX0 4024 aa1.7□□□□□ -2.14
USP44-208ENST00000552440 TNCP24821 2201 aa1.69□□□□□ -2.14
USP44-208ENST00000552440 HECTD4Q9Y4D8 3996 aa1.69□□□□□ -2.14
USP44-208ENST00000552440 FLG2Q5D862 2391 aaPredicted RBP1.69□□□□□ -2.14
USP44-208ENST00000552440 SMIM27A0A1W2PRY6 76 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 H0YGG7 62 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 I3L2K1 104 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 TP53AIP1Q9HCN2 124 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 PLCE1Q9P212 2302 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 DEFB131BA0A096LNP1 70 aa1.68□□□□□ -2.14
USP44-208ENST00000552440 MRPL33O75394 65 aaKnown RBP1.68□□□□□ -2.14
USP44-208ENST00000552440 LYNX1P0DP58 116 aa1.67□□□□□ -2.14
USP44-208ENST00000552440 KRTAP13-1Q8IUC0 172 aa1.67□□□□□ -2.14
USP44-208ENST00000552440 STARD9Q9P2P6 4700 aa1.66□□□□□ -2.14
USP44-208ENST00000552440 CRIP1P50238 77 aa1.66□□□□□ -2.14
USP44-208ENST00000552440 PIGYQ3MUY2 71 aa1.66□□□□□ -2.14
USP44-208ENST00000552440 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
USP44-208ENST00000552440 K7EQZ3 153 aa1.65□□□□□ -2.15
USP44-208ENST00000552440 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
USP44-208ENST00000552440 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
USP44-208ENST00000552440 MRPL34Q9BQ48 92 aaKnown RBP1.63□□□□□ -2.15
USP44-208ENST00000552440 RNF213Q63HN8 5207 aa1.63□□□□□ -2.15
USP44-208ENST00000552440 WNK2Q9Y3S1 2297 aa1.63□□□□□ -2.15
USP44-208ENST00000552440 LINC01546A6NGU7 62 aa1.63□□□□□ -2.15
USP44-208ENST00000552440 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
USP44-208ENST00000552440 KMT2AQ03164 3969 aa1.62□□□□□ -2.15
USP44-208ENST00000552440 CNFNQ9BYD5 112 aa1.62□□□□□ -2.15
USP44-208ENST00000552440 HUWE1Q7Z6Z7 4374 aaKnown RBP1.62□□□□□ -2.15
USP44-208ENST00000552440 H0YGX0 51 aa1.61□□□□□ -2.15
USP44-208ENST00000552440 DEFB108BQ8NET1 73 aa1.61□□□□□ -2.15
USP44-208ENST00000552440 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
USP44-208ENST00000552440 CDKN2A-AS1Q9UH64 79 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms