RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.25□□□□□ -2.45
USP44-207ENST00000552237 AKAP9Q99996 3911 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 MADDQ8WXG6 1647 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 ERVK-7P63135 1459 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 TNP1P09430 55 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 MT4P47944 62 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 SERF2P84101 59 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 NCBP2-AS2Q69YL0 99 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 ENHOQ6UWT2 76 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 C18orf32Q8TCD1 76 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 C6orf48Q9UBA6 75 aa-0.26□□□□□ -2.45
USP44-207ENST00000552237 A0A1B0GUL6 1792 aa-0.27□□□□□ -2.45
USP44-207ENST00000552237 LY75O60449 1722 aa-0.27□□□□□ -2.45
USP44-207ENST00000552237 DEFB1P60022 68 aa-0.27□□□□□ -2.45
USP44-207ENST00000552237 DEFB114Q30KQ6 69 aa-0.27□□□□□ -2.45
USP44-207ENST00000552237 A0A0C4DFX4 3053 aa-0.27□□□□□ -2.45
USP44-207ENST00000552237 RNF17Q9BXT8 1623 aaKnown RBP-0.27□□□□□ -2.45
USP44-207ENST00000552237 KMT2CQ8NEZ4 4911 aaKnown RBP-0.28□□□□□ -2.45
USP44-207ENST00000552237 USP9XQ93008 2570 aaPredicted RBP-0.28□□□□□ -2.45
USP44-207ENST00000552237 RRBP1Q9P2E9 1410 aaKnown RBP-0.28□□□□□ -2.45
USP44-207ENST00000552237 C3P01024 1663 aa-0.28□□□□□ -2.45
USP44-207ENST00000552237 ITSN2Q9NZM3 1697 aa-0.28□□□□□ -2.45
USP44-207ENST00000552237 CDC42BPGQ6DT37 1551 aa-0.28□□□□□ -2.45
USP44-207ENST00000552237 MED14O60244 1454 aa-0.29□□□□□ -2.46
USP44-207ENST00000552237 DNAH6Q9C0G6 4158 aa-0.29□□□□□ -2.46
USP44-207ENST00000552237 SPTAN1Q13813 2472 aaKnown RBP-0.29□□□□□ -2.46
USP44-207ENST00000552237 PKD1P98161 4303 aa-0.29□□□□□ -2.46
USP44-207ENST00000552237 K7EMI3 77 aa-0.29□□□□□ -2.46
USP44-207ENST00000552237 DNMBPQ6XZF7 1577 aa-0.29□□□□□ -2.46
USP44-207ENST00000552237 NIPBLQ6KC79 2804 aaeCLIP-0.3□□□□□ -2.46
USP44-207ENST00000552237 IGLV5-48A0A075B6I7 105 aa-0.3□□□□□ -2.46
USP44-207ENST00000552237 CRIP1P50238 77 aa-0.3□□□□□ -2.46
USP44-207ENST00000552237 ABCC6O95255 1503 aa-0.3□□□□□ -2.46
USP44-207ENST00000552237 WDR87Q6ZQQ6 2873 aa-0.31□□□□□ -2.46
USP44-207ENST00000552237 FRYQ5TBA9 3013 aa-0.31□□□□□ -2.46
USP44-207ENST00000552237 M0QY20 66 aa-0.31□□□□□ -2.46
USP44-207ENST00000552237 PDCD5O14737 125 aa-0.31□□□□□ -2.46
USP44-207ENST00000552237 S100ZQ8WXG8 99 aa-0.31□□□□□ -2.46
USP44-207ENST00000552237 ABCA8O94911 1581 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 DUOX2Q9NRD8 1548 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 CDC42BPAQ5VT25 1732 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 LAMA5O15230 3695 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 COL12A1Q99715 3063 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 LYSTQ99698 3801 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 NMES1Q9C002 83 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 SMCO4Q9NRQ5 59 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 TEX15Q9BXT5 2789 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 MYO9AB2RTY4 2548 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 TRIOO75962 3097 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 CUBNO60494 3623 aa-0.32□□□□□ -2.46
USP44-207ENST00000552237 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 CD163L1Q9NR16 1453 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 NBPF19A0A087WUL8 3843 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 SFTA3P0C7M3 94 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 RPS27P42677 84 aaKnown RBP-0.33□□□□□ -2.46
USP44-207ENST00000552237 MT1HP80294 61 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 RPS27LQ71UM5 84 aaKnown RBP-0.33□□□□□ -2.46
USP44-207ENST00000552237 TMEM167BQ9NRX6 74 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 DIP2AQ14689 1571 aa-0.33□□□□□ -2.46
USP44-207ENST00000552237 RANBP2P49792 3224 aaKnown RBP-0.33□□□□□ -2.46
USP44-207ENST00000552237 DNAH3Q8TD57 4116 aa-0.34□□□□□ -2.46
USP44-207ENST00000552237 A8MTW9 85 aa-0.34□□□□□ -2.46
USP44-207ENST00000552237 M0QZ58 72 aa-0.34□□□□□ -2.46
USP44-207ENST00000552237 LAMA2P24043 3122 aaKnown RBP-0.34□□□□□ -2.46
USP44-207ENST00000552237 UGGT2Q9NYU1 1516 aa-0.34□□□□□ -2.46
USP44-207ENST00000552237 FAT1Q14517 4588 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 SMIM27A0A1W2PRY6 76 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 LINC01546A6NGU7 62 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 HILPDAQ9Y5L2 63 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 LRBAP50851 2863 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 SCRIBQ14160 1630 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 PREX2Q70Z35 1606 aa-0.35□□□□□ -2.47
USP44-207ENST00000552237 RYR3Q15413 4870 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 RELNP78509 3460 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 CROCC2H7BZ55 1655 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 ITPR1Q14643 2758 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 PKHD1L1Q86WI1 4243 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 CLASP1Q7Z460 1538 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 SPART-AS1P0CW21 52 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 ABCA9Q8IUA7 1624 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 SRCAPQ6ZRS2 3230 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 COL6A5A8TX70 2615 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
USP44-207ENST00000552237 IQGAP3Q86VI3 1631 aa-0.37□□□□□ -2.47
USP44-207ENST00000552237 FAM208AQ9UK61 1670 aaKnown RBP-0.37□□□□□ -2.47
USP44-207ENST00000552237 DNAH9Q9NYC9 4486 aa-0.37□□□□□ -2.47
USP44-207ENST00000552237 C5orf42Q9H799 3197 aa-0.38□□□□□ -2.47
USP44-207ENST00000552237 STARD9Q9P2P6 4700 aa-0.38□□□□□ -2.47
USP44-207ENST00000552237 LINC01549A6NIU2 74 aa-0.38□□□□□ -2.47
USP44-207ENST00000552237 HERC2O95714 4834 aa-0.38□□□□□ -2.47
USP44-207ENST00000552237 ALS2Q96Q42 1657 aa-0.38□□□□□ -2.47
USP44-207ENST00000552237 UBR4Q5T4S7 5183 aa-0.39□□□□□ -2.47
USP44-207ENST00000552237 UGGT1Q9NYU2 1555 aa-0.39□□□□□ -2.47
USP44-207ENST00000552237 M0R1W7 72 aa-0.39□□□□□ -2.47
USP44-207ENST00000552237 USH2AO75445 5202 aa-0.39□□□□□ -2.47
USP44-207ENST00000552237 ANK3Q12955 4377 aaKnown RBP-0.39□□□□□ -2.47
USP44-207ENST00000552237 VPS13DQ5THJ4 4388 aa-0.39□□□□□ -2.47
USP44-207ENST00000552237 VPS13BQ7Z7G8 4022 aa-0.39□□□□□ -2.47
USP44-207ENST00000552237 ASXL1Q8IXJ9 1541 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms