RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 A0A1B0GVY2 172 aa8.15□□□□□ -1.11
RAB3IP-216ENST00000552199 H3BPC8 53 aa8.14□□□□□ -1.11
RAB3IP-216ENST00000552199 LINC00208Q96KT6 92 aa8.14□□□□□ -1.11
RAB3IP-216ENST00000552199 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
RAB3IP-216ENST00000552199 NOTCH2NLQ7Z3S9 236 aa8.13□□□□□ -1.11
RAB3IP-216ENST00000552199 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
RAB3IP-216ENST00000552199 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-216ENST00000552199 Q5XG85 94 aa8.12□□□□□ -1.11
RAB3IP-216ENST00000552199 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
RAB3IP-216ENST00000552199 TRAV22A0A0B4J277 110 aa8.11□□□□□ -1.11
RAB3IP-216ENST00000552199 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
RAB3IP-216ENST00000552199 RYR2Q92736 4967 aa8.09□□□□□ -1.11
RAB3IP-216ENST00000552199 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
RAB3IP-216ENST00000552199 NDUFS5O43920 106 aa8.07□□□□□ -1.12
RAB3IP-216ENST00000552199 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
RAB3IP-216ENST00000552199 C8orf87E5RJ46 101 aa8.06□□□□□ -1.12
RAB3IP-216ENST00000552199 SMR3BP02814 79 aaPredicted RBP8.06□□□□□ -1.12
RAB3IP-216ENST00000552199 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
RAB3IP-216ENST00000552199 LIMD2Q9BT23 127 aa8.05□□□□□ -1.12
RAB3IP-216ENST00000552199 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
RAB3IP-216ENST00000552199 CYP4F30PQ9H0H9 118 aa8.03□□□□□ -1.12
RAB3IP-216ENST00000552199 SMIM26A0A096LP01 95 aa8.01□□□□□ -1.13
RAB3IP-216ENST00000552199 APOBP04114 4563 aaKnown RBP8.01□□□□□ -1.13
RAB3IP-216ENST00000552199 LINC00313P59037 77 aa8.01□□□□□ -1.13
RAB3IP-216ENST00000552199 SPINK1P00995 79 aa8□□□□□ -1.13
RAB3IP-216ENST00000552199 SPANXA2-OT1Q8N9U9 137 aa8□□□□□ -1.13
RAB3IP-216ENST00000552199 RYR3Q15413 4870 aa8□□□□□ -1.13
RAB3IP-216ENST00000552199 PRR4Q16378 134 aa7.99□□□□□ -1.13
RAB3IP-216ENST00000552199 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
RAB3IP-216ENST00000552199 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
RAB3IP-216ENST00000552199 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.13
RAB3IP-216ENST00000552199 Q5W150 140 aa7.95□□□□□ -1.14
RAB3IP-216ENST00000552199 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
RAB3IP-216ENST00000552199 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
RAB3IP-216ENST00000552199 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
RAB3IP-216ENST00000552199 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
RAB3IP-216ENST00000552199 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
RAB3IP-216ENST00000552199 PCOTHQ58A44 107 aa7.93□□□□□ -1.14
RAB3IP-216ENST00000552199 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
RAB3IP-216ENST00000552199 FAT1Q14517 4588 aa7.93□□□□□ -1.14
RAB3IP-216ENST00000552199 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
RAB3IP-216ENST00000552199 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
RAB3IP-216ENST00000552199 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
RAB3IP-216ENST00000552199 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
RAB3IP-216ENST00000552199 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
RAB3IP-216ENST00000552199 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
RAB3IP-216ENST00000552199 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
RAB3IP-216ENST00000552199 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
RAB3IP-216ENST00000552199 Q1T7F1 81 aa7.79□□□□□ -1.16
RAB3IP-216ENST00000552199 COA5Q86WW8 74 aa7.79□□□□□ -1.16
RAB3IP-216ENST00000552199 HRES1P13985 223 aa7.74□□□□□ -1.17
RAB3IP-216ENST00000552199 Q5VSD8 79 aa7.74□□□□□ -1.17
RAB3IP-216ENST00000552199 HSPG2P98160 4391 aa7.72□□□□□ -1.17
RAB3IP-216ENST00000552199 V9GYY9 64 aa7.71□□□□□ -1.18
RAB3IP-216ENST00000552199 EPPK1P58107 5090 aaKnown RBP7.7□□□□□ -1.18
RAB3IP-216ENST00000552199 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
RAB3IP-216ENST00000552199 C9orf92A6NGG3 77 aa7.69□□□□□ -1.18
RAB3IP-216ENST00000552199 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
RAB3IP-216ENST00000552199 RYR1P21817 5038 aa7.69□□□□□ -1.18
RAB3IP-216ENST00000552199 Q8N1X5 172 aa7.68□□□□□ -1.18
RAB3IP-216ENST00000552199 ACYP2P14621 99 aa7.67□□□□□ -1.18
RAB3IP-216ENST00000552199 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
RAB3IP-216ENST00000552199 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
RAB3IP-216ENST00000552199 A8MUU9 505 aa7.66□□□□□ -1.18
RAB3IP-216ENST00000552199 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
RAB3IP-216ENST00000552199 SVIPQ8NHG7 77 aa7.66□□□□□ -1.18
RAB3IP-216ENST00000552199 PSPHP1O15172 72 aa7.65□□□□□ -1.18
RAB3IP-216ENST00000552199 TNXBP22105 4242 aa7.64□□□□□ -1.19
RAB3IP-216ENST00000552199 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
RAB3IP-216ENST00000552199 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
RAB3IP-216ENST00000552199 A8MUN3 132 aa7.62□□□□□ -1.19
RAB3IP-216ENST00000552199 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
RAB3IP-216ENST00000552199 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
RAB3IP-216ENST00000552199 KIAA1109Q2LD37 5005 aa7.58□□□□□ -1.2
RAB3IP-216ENST00000552199 Q5VV11 94 aa7.58□□□□□ -1.2
RAB3IP-216ENST00000552199 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
RAB3IP-216ENST00000552199 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
RAB3IP-216ENST00000552199 CHKB-CPT1BH3BT56 60 aa7.56□□□□□ -1.2
RAB3IP-216ENST00000552199 BRK1Q8WUW1 75 aa7.56□□□□□ -1.2
RAB3IP-216ENST00000552199 Q75L30 129 aa7.54□□□□□ -1.2
RAB3IP-216ENST00000552199 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
RAB3IP-216ENST00000552199 MT1HL1P0DM35 61 aa7.5□□□□□ -1.21
RAB3IP-216ENST00000552199 SPINK7P58062 85 aa7.47□□□□□ -1.21
RAB3IP-216ENST00000552199 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.21
RAB3IP-216ENST00000552199 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
RAB3IP-216ENST00000552199 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
RAB3IP-216ENST00000552199 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
RAB3IP-216ENST00000552199 RPL37P61927 97 aaKnown RBP7.4□□□□□ -1.22
RAB3IP-216ENST00000552199 A6NED7 52 aa7.4□□□□□ -1.23
RAB3IP-216ENST00000552199 XP32Q5T750 250 aa7.4□□□□□ -1.23
RAB3IP-216ENST00000552199 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
RAB3IP-216ENST00000552199 A8MU10 97 aa7.35□□□□□ -1.23
RAB3IP-216ENST00000552199 A0A1B0GU69 56 aa7.35□□□□□ -1.23
RAB3IP-216ENST00000552199 LCA10Q71F78 164 aa7.34□□□□□ -1.23
RAB3IP-216ENST00000552199 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
RAB3IP-216ENST00000552199 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
RAB3IP-216ENST00000552199 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
RAB3IP-216ENST00000552199 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
RAB3IP-216ENST00000552199 HERC2O95714 4834 aa7.3□□□□□ -1.24
RAB3IP-216ENST00000552199 ABCA13Q86UQ4 5058 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms