RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 TMEM256-PLSCR3K7ERE1 68 aa10.11□□□□□ -0.79
SMARCD1-212ENST00000551966 CEND1Q8N111 149 aa10.11□□□□□ -0.79
SMARCD1-212ENST00000551966 H3BQ85 93 aa10.09□□□□□ -0.79
SMARCD1-212ENST00000551966 DNAL4O96015 105 aa10.09□□□□□ -0.79
SMARCD1-212ENST00000551966 VPS25Q9BRG1 176 aa10.07□□□□□ -0.8
SMARCD1-212ENST00000551966 FXYD2P54710 66 aa10.06□□□□□ -0.8
SMARCD1-212ENST00000551966 MUC12Q9UKN1 5478 aa10.06□□□□□ -0.8
SMARCD1-212ENST00000551966 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
SMARCD1-212ENST00000551966 J3KT08 172 aa10.02□□□□□ -0.81
SMARCD1-212ENST00000551966 PAM16Q9Y3D7 125 aa10.02□□□□□ -0.81
SMARCD1-212ENST00000551966 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
SMARCD1-212ENST00000551966 A6NJY4 79 aa10.01□□□□□ -0.81
SMARCD1-212ENST00000551966 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
SMARCD1-212ENST00000551966 SPATA45Q537H7 98 aa10.01□□□□□ -0.81
SMARCD1-212ENST00000551966 S100A6P06703 90 aa10□□□□□ -0.81
SMARCD1-212ENST00000551966 LYRM7Q5U5X0 104 aa10□□□□□ -0.81
SMARCD1-212ENST00000551966 KRTAP20-1Q3LI63 56 aa9.98□□□□□ -0.81
SMARCD1-212ENST00000551966 C8orf17Q9NRJ1 99 aa9.98□□□□□ -0.81
SMARCD1-212ENST00000551966 PSMB2P49721 201 aa9.97□□□□□ -0.81
SMARCD1-212ENST00000551966 RBM3P98179 157 aaKnown RBP9.97□□□□□ -0.81
SMARCD1-212ENST00000551966 NDUFB1O75438 58 aa9.95□□□□□ -0.82
SMARCD1-212ENST00000551966 Q6ZQT0 140 aa9.95□□□□□ -0.82
SMARCD1-212ENST00000551966 DSCR8Q96T75 97 aa9.94□□□□□ -0.82
SMARCD1-212ENST00000551966 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
SMARCD1-212ENST00000551966 K7ERJ3 54 aa9.93□□□□□ -0.82
SMARCD1-212ENST00000551966 A6NN06 94 aa9.92□□□□□ -0.82
SMARCD1-212ENST00000551966 COX6CP09669 75 aa9.91□□□□□ -0.82
SMARCD1-212ENST00000551966 Q6ZVQ6 151 aa9.89□□□□□ -0.83
SMARCD1-212ENST00000551966 VAMP8Q9BV40 100 aa9.89□□□□□ -0.83
SMARCD1-212ENST00000551966 MT1BP07438 61 aa9.88□□□□□ -0.83
SMARCD1-212ENST00000551966 C21orf62-AS1Q17RA5 79 aa9.87□□□□□ -0.83
SMARCD1-212ENST00000551966 C9JAW5 83 aa9.86□□□□□ -0.83
SMARCD1-212ENST00000551966 BAALC-AS2P0C853 105 aa9.8□□□□□ -0.84
SMARCD1-212ENST00000551966 S100A1P23297 94 aa9.8□□□□□ -0.84
SMARCD1-212ENST00000551966 KRTAP5-9P26371 169 aa9.8□□□□□ -0.84
SMARCD1-212ENST00000551966 HSD52Q0P140 79 aa9.79□□□□□ -0.84
SMARCD1-212ENST00000551966 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
SMARCD1-212ENST00000551966 MRPL34Q9BQ48 92 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-212ENST00000551966 MMP24-AS1A0A0U1RRL7 71 aa9.75□□□□□ -0.85
SMARCD1-212ENST00000551966 KRTAP19-8Q3LI54 63 aa9.75□□□□□ -0.85
SMARCD1-212ENST00000551966 Q5VV11 94 aa9.75□□□□□ -0.85
SMARCD1-212ENST00000551966 TMEM254Q8TBM7 123 aa9.75□□□□□ -0.85
SMARCD1-212ENST00000551966 SCGB1C2P0DMR2 95 aa9.74□□□□□ -0.85
SMARCD1-212ENST00000551966 KRTAP10-5P60370 271 aa9.74□□□□□ -0.85
SMARCD1-212ENST00000551966 IGKV2D-30A0A075B6S6 120 aa9.72□□□□□ -0.85
SMARCD1-212ENST00000551966 IGKV2-30P06310 120 aa9.72□□□□□ -0.85
SMARCD1-212ENST00000551966 KMT2DO14686 5537 aa9.71□□□□□ -0.86
SMARCD1-212ENST00000551966 A0A1B0GW54 56 aa9.7□□□□□ -0.86
SMARCD1-212ENST00000551966 Q5W150 140 aa9.7□□□□□ -0.86
SMARCD1-212ENST00000551966 MDN1Q9NU22 5596 aa9.69□□□□□ -0.86
SMARCD1-212ENST00000551966 SPRR2GQ9BYE4 73 aa9.69□□□□□ -0.86
SMARCD1-212ENST00000551966 LOC110117498A0A087WWA1 95 aa9.68□□□□□ -0.86
SMARCD1-212ENST00000551966 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
SMARCD1-212ENST00000551966 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
SMARCD1-212ENST00000551966 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
SMARCD1-212ENST00000551966 NDUFS5O43920 106 aa9.66□□□□□ -0.86
SMARCD1-212ENST00000551966 hDV103S1A0JD37 113 aa9.65□□□□□ -0.86
SMARCD1-212ENST00000551966 C4orf26Q17RF5 130 aa9.64□□□□□ -0.87
SMARCD1-212ENST00000551966 C7orf65Q6ZTY9 151 aa9.64□□□□□ -0.87
SMARCD1-212ENST00000551966 JMJD7-PLA2G4BH0Y9G9 81 aa9.63□□□□□ -0.87
SMARCD1-212ENST00000551966 NREPQ16612 68 aa9.62□□□□□ -0.87
SMARCD1-212ENST00000551966 K7EQZ3 153 aa9.6□□□□□ -0.87
SMARCD1-212ENST00000551966 KRTAP2-3P0C7H8 128 aa9.59□□□□□ -0.87
SMARCD1-212ENST00000551966 KRTAP2-4Q9BYR9 128 aa9.59□□□□□ -0.87
SMARCD1-212ENST00000551966 PDE6GP18545 87 aa9.58□□□□□ -0.88
SMARCD1-212ENST00000551966 C14orf132Q9NPU4 83 aa9.58□□□□□ -0.88
SMARCD1-212ENST00000551966 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
SMARCD1-212ENST00000551966 PYY3Q5JQD4 70 aa9.55□□□□□ -0.88
SMARCD1-212ENST00000551966 ATXN8Q156A1 80 aa9.51□□□□□ -0.89
SMARCD1-212ENST00000551966 CSAG1Q6PB30 78 aa9.5□□□□□ -0.89
SMARCD1-212ENST00000551966 UQCR10Q9UDW1 63 aa9.5□□□□□ -0.89
SMARCD1-212ENST00000551966 S4R3F8 94 aa9.48□□□□□ -0.89
SMARCD1-212ENST00000551966 LCA10Q71F78 164 aa9.46□□□□□ -0.9
SMARCD1-212ENST00000551966 NAA38Q9BRA0 125 aaKnown RBP9.46□□□□□ -0.9
SMARCD1-212ENST00000551966 KLKP1Q107X0 134 aa9.45□□□□□ -0.9
SMARCD1-212ENST00000551966 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
SMARCD1-212ENST00000551966 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
SMARCD1-212ENST00000551966 BPY2O14599 106 aa9.38□□□□□ -0.91
SMARCD1-212ENST00000551966 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
SMARCD1-212ENST00000551966 Q8N9L7 120 aa9.37□□□□□ -0.91
SMARCD1-212ENST00000551966 C1orf64Q8NEQ6 169 aa9.37□□□□□ -0.91
SMARCD1-212ENST00000551966 IMUPQ9GZP8 106 aa9.37□□□□□ -0.91
SMARCD1-212ENST00000551966 SPRR2EP22531 72 aa9.34□□□□□ -0.91
SMARCD1-212ENST00000551966 SPRR2BP35325 72 aa9.34□□□□□ -0.91
SMARCD1-212ENST00000551966 SPRR2AP35326 72 aa9.34□□□□□ -0.91
SMARCD1-212ENST00000551966 CXCL6P80162 114 aa9.34□□□□□ -0.91
SMARCD1-212ENST00000551966 SPRR2FQ96RM1 72 aa9.34□□□□□ -0.91
SMARCD1-212ENST00000551966 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
SMARCD1-212ENST00000551966 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-212ENST00000551966 KRTAP2-2Q9BYT5 123 aa9.25□□□□□ -0.93
SMARCD1-212ENST00000551966 KRTAP2-1Q9BYU5 128 aa9.25□□□□□ -0.93
SMARCD1-212ENST00000551966 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
SMARCD1-212ENST00000551966 M0R143 59 aa9.19□□□□□ -0.94
SMARCD1-212ENST00000551966 LCE1AQ5T7P2 110 aa9.19□□□□□ -0.94
SMARCD1-212ENST00000551966 A0A087WVE0 104 aa9.16□□□□□ -0.94
SMARCD1-212ENST00000551966 H3BT86 120 aa9.13□□□□□ -0.95
SMARCD1-212ENST00000551966 MT1XP80297 61 aa9.11□□□□□ -0.95
SMARCD1-212ENST00000551966 KRTAP8-1Q8IUC2 63 aa9.11□□□□□ -0.95
SMARCD1-212ENST00000551966 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
SMARCD1-212ENST00000551966 PRO2289Q9P1D8 64 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms