RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 C8orf87E5RJ46 101 aa10.33□□□□□ -0.76
SLC48A1-208ENST00000551301 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
SLC48A1-208ENST00000551301 LOC105371267A0A1B0GV96 52 aa10.32□□□□□ -0.76
SLC48A1-208ENST00000551301 NOTCH2NLQ7Z3S9 236 aa10.32□□□□□ -0.76
SLC48A1-208ENST00000551301 RBM12B-AS1Q9P1G2 102 aa10.32□□□□□ -0.76
SLC48A1-208ENST00000551301 J3KT08 172 aa10.31□□□□□ -0.76
SLC48A1-208ENST00000551301 A0A1B0GVX0 72 aa10.3□□□□□ -0.76
SLC48A1-208ENST00000551301 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
SLC48A1-208ENST00000551301 NDUFB1O75438 58 aa10.26□□□□□ -0.77
SLC48A1-208ENST00000551301 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
SLC48A1-208ENST00000551301 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
SLC48A1-208ENST00000551301 Q6ZQT0 140 aa10.23□□□□□ -0.77
SLC48A1-208ENST00000551301 MTURNQ8N3F0 131 aa10.21□□□□□ -0.77
SLC48A1-208ENST00000551301 A0A1B0GW54 56 aa10.2□□□□□ -0.78
SLC48A1-208ENST00000551301 PDE6GP18545 87 aa10.2□□□□□ -0.78
SLC48A1-208ENST00000551301 HRES1P13985 223 aa10.18□□□□□ -0.78
SLC48A1-208ENST00000551301 ZCCHC13Q8WW36 166 aaKnown RBP10.18□□□□□ -0.78
SLC48A1-208ENST00000551301 LYRM7Q5U5X0 104 aa10.17□□□□□ -0.78
SLC48A1-208ENST00000551301 MPLKIPQ8TAP9 179 aa10.16□□□□□ -0.78
SLC48A1-208ENST00000551301 KRTAP9-8Q9BYQ0 159 aa10.16□□□□□ -0.78
SLC48A1-208ENST00000551301 LOC110117498A0A087WWA1 95 aa10.15□□□□□ -0.78
SLC48A1-208ENST00000551301 BATFQ16520 125 aa10.15□□□□□ -0.78
SLC48A1-208ENST00000551301 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.78
SLC48A1-208ENST00000551301 A8MWP4 228 aa10.12□□□□□ -0.79
SLC48A1-208ENST00000551301 SPINK7P58062 85 aa10.1□□□□□ -0.79
SLC48A1-208ENST00000551301 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
SLC48A1-208ENST00000551301 C8orf17Q9NRJ1 99 aa10.09□□□□□ -0.79
SLC48A1-208ENST00000551301 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
SLC48A1-208ENST00000551301 NREPQ16612 68 aa10.06□□□□□ -0.8
SLC48A1-208ENST00000551301 IGKV3D-7A0A0C4DH55 119 aa10.03□□□□□ -0.8
SLC48A1-208ENST00000551301 MT2AP02795 61 aa10.03□□□□□ -0.8
SLC48A1-208ENST00000551301 Q6ZVQ6 151 aa10.02□□□□□ -0.81
SLC48A1-208ENST00000551301 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
SLC48A1-208ENST00000551301 PRR15Q8IV56 129 aa10.01□□□□□ -0.81
SLC48A1-208ENST00000551301 KRTAP10-10P60014 251 aa10□□□□□ -0.81
SLC48A1-208ENST00000551301 TAX1BP3O14907 124 aa9.99□□□□□ -0.81
SLC48A1-208ENST00000551301 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
SLC48A1-208ENST00000551301 A0A1W2PPM0 123 aa9.96□□□□□ -0.82
SLC48A1-208ENST00000551301 MT1FP04733 61 aa9.94□□□□□ -0.82
SLC48A1-208ENST00000551301 TMEM254Q8TBM7 123 aa9.94□□□□□ -0.82
SLC48A1-208ENST00000551301 H3BT86 120 aa9.93□□□□□ -0.82
SLC48A1-208ENST00000551301 MRPL34Q9BQ48 92 aaKnown RBP9.93□□□□□ -0.82
SLC48A1-208ENST00000551301 NDUFS5O43920 106 aa9.91□□□□□ -0.82
SLC48A1-208ENST00000551301 hDV103S1A0JD37 113 aa9.9□□□□□ -0.82
SLC48A1-208ENST00000551301 USH2AO75445 5202 aa9.9□□□□□ -0.83
SLC48A1-208ENST00000551301 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
SLC48A1-208ENST00000551301 COL5A1-AS1Q5SY13 56 aa9.88□□□□□ -0.83
SLC48A1-208ENST00000551301 BPY2O14599 106 aa9.87□□□□□ -0.83
SLC48A1-208ENST00000551301 K7EQZ3 153 aa9.85□□□□□ -0.83
SLC48A1-208ENST00000551301 KRTAP9-3Q9BYQ3 159 aa9.85□□□□□ -0.83
SLC48A1-208ENST00000551301 SPCS1Q9Y6A9 102 aa9.84□□□□□ -0.83
SLC48A1-208ENST00000551301 SSPOA2VEC9 5147 aa9.81□□□□□ -0.84
SLC48A1-208ENST00000551301 PCP4L1A6NKN8 68 aa9.81□□□□□ -0.84
SLC48A1-208ENST00000551301 LCE2BO14633 110 aa9.81□□□□□ -0.84
SLC48A1-208ENST00000551301 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.79□□□□□ -0.84
SLC48A1-208ENST00000551301 H1FX-AS1Q4G0G2 97 aa9.77□□□□□ -0.85
SLC48A1-208ENST00000551301 IGKV2D-30A0A075B6S6 120 aa9.76□□□□□ -0.85
SLC48A1-208ENST00000551301 IGKV2-30P06310 120 aa9.76□□□□□ -0.85
SLC48A1-208ENST00000551301 LINC00846Q9NV44 126 aa9.75□□□□□ -0.85
SLC48A1-208ENST00000551301 C7orf65Q6ZTY9 151 aa9.74□□□□□ -0.85
SLC48A1-208ENST00000551301 CASC2Q6XLA1 102 aa9.73□□□□□ -0.85
SLC48A1-208ENST00000551301 KRTAP9-7A8MTY7 169 aa9.72□□□□□ -0.85
SLC48A1-208ENST00000551301 KRTAP19-1Q8IUB9 90 aa9.72□□□□□ -0.85
SLC48A1-208ENST00000551301 K7EP34 96 aa9.71□□□□□ -0.86
SLC48A1-208ENST00000551301 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
SLC48A1-208ENST00000551301 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
SLC48A1-208ENST00000551301 HCG22E2RYF7 251 aa9.68□□□□□ -0.86
SLC48A1-208ENST00000551301 Q8N9L7 120 aa9.68□□□□□ -0.86
SLC48A1-208ENST00000551301 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
SLC48A1-208ENST00000551301 CXCL6P80162 114 aa9.66□□□□□ -0.86
SLC48A1-208ENST00000551301 Q5W150 140 aa9.66□□□□□ -0.86
SLC48A1-208ENST00000551301 GTF2H5Q6ZYL4 71 aa9.66□□□□□ -0.86
SLC48A1-208ENST00000551301 FCGBPQ9Y6R7 5405 aaPredicted RBP9.65□□□□□ -0.86
SLC48A1-208ENST00000551301 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
SLC48A1-208ENST00000551301 F8W1H4 67 aa9.55□□□□□ -0.88
SLC48A1-208ENST00000551301 KRTAP19-6Q3LI70 58 aa9.53□□□□□ -0.88
SLC48A1-208ENST00000551301 MACF1Q9UPN3 7388 aaKnown RBP9.47□□□□□ -0.89
SLC48A1-208ENST00000551301 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.9
SLC48A1-208ENST00000551301 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
SLC48A1-208ENST00000551301 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
SLC48A1-208ENST00000551301 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
SLC48A1-208ENST00000551301 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
SLC48A1-208ENST00000551301 S4R3F8 94 aa9.41□□□□□ -0.9
SLC48A1-208ENST00000551301 C1orf64Q8NEQ6 169 aa9.4□□□□□ -0.9
SLC48A1-208ENST00000551301 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
SLC48A1-208ENST00000551301 SYNE2Q8WXH0 6885 aaKnown RBP9.36□□□□□ -0.91
SLC48A1-208ENST00000551301 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
SLC48A1-208ENST00000551301 ACYP1P07311 99 aa9.3□□□□□ -0.92
SLC48A1-208ENST00000551301 FAM240AA0A1B0GVK7 77 aa9.29□□□□□ -0.92
SLC48A1-208ENST00000551301 LCA10Q71F78 164 aa9.29□□□□□ -0.92
SLC48A1-208ENST00000551301 A0A1B0GV90 55 aa9.26□□□□□ -0.93
SLC48A1-208ENST00000551301 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
SLC48A1-208ENST00000551301 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
SLC48A1-208ENST00000551301 ATP5EP2Q5VTU8 51 aa9.2□□□□□ -0.94
SLC48A1-208ENST00000551301 Q5VV11 94 aa9.2□□□□□ -0.94
SLC48A1-208ENST00000551301 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
SLC48A1-208ENST00000551301 KRTAP6-3Q3LI67 103 aa9.15□□□□□ -0.94
SLC48A1-208ENST00000551301 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
SLC48A1-208ENST00000551301 A6NN06 94 aa9.14□□□□□ -0.95
SLC48A1-208ENST00000551301 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms