RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
PRPF40B-213ENST00000551269 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
PRPF40B-213ENST00000551269 A8MWP4 228 aa6.45□□□□□ -1.38
PRPF40B-213ENST00000551269 C8orf87E5RJ46 101 aa6.44□□□□□ -1.38
PRPF40B-213ENST00000551269 DSCR10P59022 87 aa6.44□□□□□ -1.38
PRPF40B-213ENST00000551269 XP32Q5T750 250 aa6.43□□□□□ -1.38
PRPF40B-213ENST00000551269 LINC00313P59037 77 aa6.42□□□□□ -1.38
PRPF40B-213ENST00000551269 LRP2P98164 4655 aa6.41□□□□□ -1.38
PRPF40B-213ENST00000551269 IGKV3D-7A0A0C4DH55 119 aa6.4□□□□□ -1.38
PRPF40B-213ENST00000551269 K7EQZ3 153 aa6.4□□□□□ -1.38
PRPF40B-213ENST00000551269 PRR15Q8IV56 129 aa6.39□□□□□ -1.39
PRPF40B-213ENST00000551269 CXCL6P80162 114 aa6.38□□□□□ -1.39
PRPF40B-213ENST00000551269 ATP5EP2Q5VTU8 51 aa6.38□□□□□ -1.39
PRPF40B-213ENST00000551269 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
PRPF40B-213ENST00000551269 K7ERU9 68 aa6.37□□□□□ -1.39
PRPF40B-213ENST00000551269 SEC61BP60468 96 aaKnown RBP6.36□□□□□ -1.39
PRPF40B-213ENST00000551269 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
PRPF40B-213ENST00000551269 Q8N9L7 120 aa6.36□□□□□ -1.39
PRPF40B-213ENST00000551269 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
PRPF40B-213ENST00000551269 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
PRPF40B-213ENST00000551269 Q75L30 129 aa6.34□□□□□ -1.39
PRPF40B-213ENST00000551269 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
PRPF40B-213ENST00000551269 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
PRPF40B-213ENST00000551269 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
PRPF40B-213ENST00000551269 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
PRPF40B-213ENST00000551269 A8MUU9 505 aa6.31□□□□□ -1.4
PRPF40B-213ENST00000551269 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
PRPF40B-213ENST00000551269 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
PRPF40B-213ENST00000551269 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
PRPF40B-213ENST00000551269 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
PRPF40B-213ENST00000551269 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
PRPF40B-213ENST00000551269 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
PRPF40B-213ENST00000551269 HIST1H4AP62805 103 aaKnown RBP6.29□□□□□ -1.4
PRPF40B-213ENST00000551269 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
PRPF40B-213ENST00000551269 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
PRPF40B-213ENST00000551269 NDUFS5O43920 106 aa6.28□□□□□ -1.4
PRPF40B-213ENST00000551269 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-213ENST00000551269 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
PRPF40B-213ENST00000551269 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.42
PRPF40B-213ENST00000551269 A0A087WVE0 104 aa6.2□□□□□ -1.42
PRPF40B-213ENST00000551269 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
PRPF40B-213ENST00000551269 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
PRPF40B-213ENST00000551269 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
PRPF40B-213ENST00000551269 A0A0U1RQV1 116 aa6.15□□□□□ -1.42
PRPF40B-213ENST00000551269 IMUPQ9GZP8 106 aa6.15□□□□□ -1.42
PRPF40B-213ENST00000551269 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
PRPF40B-213ENST00000551269 SCGB1A1P11684 91 aa6.1□□□□□ -1.43
PRPF40B-213ENST00000551269 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
PRPF40B-213ENST00000551269 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
PRPF40B-213ENST00000551269 FAM236AA0A1B0GUQ0 79 aa6.08□□□□□ -1.44
PRPF40B-213ENST00000551269 FAM236BA0A1B0GV22 79 aa6.08□□□□□ -1.44
PRPF40B-213ENST00000551269 Q5W150 140 aa6.08□□□□□ -1.44
PRPF40B-213ENST00000551269 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
PRPF40B-213ENST00000551269 UQCRQO14949 82 aa6.07□□□□□ -1.44
PRPF40B-213ENST00000551269 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
PRPF40B-213ENST00000551269 SPINK7P58062 85 aa6.07□□□□□ -1.44
PRPF40B-213ENST00000551269 MUC2Q02817 5179 aa6.06□□□□□ -1.44
PRPF40B-213ENST00000551269 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
PRPF40B-213ENST00000551269 H0Y9P7 68 aa6.04□□□□□ -1.44
PRPF40B-213ENST00000551269 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
PRPF40B-213ENST00000551269 FAM236DA0A1B0GTK5 79 aa6.03□□□□□ -1.44
PRPF40B-213ENST00000551269 ATOX1O00244 68 aa6.03□□□□□ -1.44
PRPF40B-213ENST00000551269 FAM236CP0DP71 79 aa6.03□□□□□ -1.44
PRPF40B-213ENST00000551269 OCR1Q9BZK8 76 aa6.02□□□□□ -1.45
PRPF40B-213ENST00000551269 HRES1P13985 223 aa6.01□□□□□ -1.45
PRPF40B-213ENST00000551269 MP68P56378 58 aa6.01□□□□□ -1.45
PRPF40B-213ENST00000551269 SMIM20Q8N5G0 67 aa6.01□□□□□ -1.45
PRPF40B-213ENST00000551269 LOC101927531A0A1B0GV80 90 aa6□□□□□ -1.45
PRPF40B-213ENST00000551269 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
PRPF40B-213ENST00000551269 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
PRPF40B-213ENST00000551269 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
PRPF40B-213ENST00000551269 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
PRPF40B-213ENST00000551269 H3BPC8 53 aa5.94□□□□□ -1.46
PRPF40B-213ENST00000551269 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
PRPF40B-213ENST00000551269 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
PRPF40B-213ENST00000551269 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
PRPF40B-213ENST00000551269 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
PRPF40B-213ENST00000551269 C4orf26Q17RF5 130 aa5.9□□□□□ -1.46
PRPF40B-213ENST00000551269 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
PRPF40B-213ENST00000551269 SERP2Q8N6R1 65 aa5.88□□□□□ -1.47
PRPF40B-213ENST00000551269 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
PRPF40B-213ENST00000551269 M0R2T5 61 aa5.85□□□□□ -1.47
PRPF40B-213ENST00000551269 MT1HP80294 61 aa5.85□□□□□ -1.47
PRPF40B-213ENST00000551269 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-213ENST00000551269 KLKP1Q107X0 134 aa5.83□□□□□ -1.48
PRPF40B-213ENST00000551269 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
PRPF40B-213ENST00000551269 C20orf197Q8N268 126 aa5.82□□□□□ -1.48
PRPF40B-213ENST00000551269 ANAPC13Q9BS18 74 aa5.82□□□□□ -1.48
PRPF40B-213ENST00000551269 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
PRPF40B-213ENST00000551269 COX7CP15954 63 aa5.8□□□□□ -1.48
PRPF40B-213ENST00000551269 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
PRPF40B-213ENST00000551269 A8MUN3 132 aa5.77□□□□□ -1.49
PRPF40B-213ENST00000551269 S4R3F8 94 aa5.76□□□□□ -1.49
PRPF40B-213ENST00000551269 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
PRPF40B-213ENST00000551269 DMAC1Q96GE9 116 aa5.7□□□□□ -1.5
PRPF40B-213ENST00000551269 NDUFC1O43677 76 aa5.69□□□□□ -1.5
PRPF40B-213ENST00000551269 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
PRPF40B-213ENST00000551269 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
PRPF40B-213ENST00000551269 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
PRPF40B-213ENST00000551269 LCA10Q71F78 164 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms