RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 HIVEP3Q5T1R4 2406 aa0.54□□□□□ -2.32
TSPAN8-205ENST00000550818 SPINK6Q6UWN8 80 aa0.54□□□□□ -2.32
TSPAN8-205ENST00000550818 RIF1Q5UIP0 2472 aaKnown RBP0.54□□□□□ -2.32
TSPAN8-205ENST00000550818 PKD1L1Q8TDX9 2849 aa0.53□□□□□ -2.32
TSPAN8-205ENST00000550818 FAM186AA6NE01 2351 aa0.53□□□□□ -2.32
TSPAN8-205ENST00000550818 LYSTQ99698 3801 aa0.53□□□□□ -2.32
TSPAN8-205ENST00000550818 FLNCQ14315 2725 aa0.53□□□□□ -2.32
TSPAN8-205ENST00000550818 ZZEF1O43149 2961 aa0.53□□□□□ -2.33
TSPAN8-205ENST00000550818 PTPN13Q12923 2485 aa0.53□□□□□ -2.33
TSPAN8-205ENST00000550818 NF1P21359 2839 aa0.52□□□□□ -2.33
TSPAN8-205ENST00000550818 VPS13DQ5THJ4 4388 aa0.52□□□□□ -2.33
TSPAN8-205ENST00000550818 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
TSPAN8-205ENST00000550818 APC2O95996 2303 aa0.52□□□□□ -2.33
TSPAN8-205ENST00000550818 K7EIM0 57 aa0.52□□□□□ -2.33
TSPAN8-205ENST00000550818 LEAP2Q969E1 77 aa0.52□□□□□ -2.33
TSPAN8-205ENST00000550818 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 PDZD2O15018 2839 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 MGAQ8IWI9 3026 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 TNXBP22105 4242 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 C9orf92A6NGG3 77 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 H0YGG7 62 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 M0R2T5 61 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 DEFB135Q30KP9 77 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 TTTY10Q9BZA0 68 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 KMT2AQ03164 3969 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 COL12A1Q99715 3063 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 DCHS2Q6V1P9 2916 aa0.51□□□□□ -2.33
TSPAN8-205ENST00000550818 CCDC168Q8NDH2 2452 aa0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 VPS13BQ7Z7G8 4022 aa0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 SETXQ7Z333 2677 aaKnown RBP0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 ACANP16112 2415 aa0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 SACSQ9NZJ4 4579 aa0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 DNAH11Q96DT5 4516 aa0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
TSPAN8-205ENST00000550818 SPINK1P00995 79 aa0.49□□□□□ -2.33
TSPAN8-205ENST00000550818 TOMM7Q9P0U1 55 aa0.49□□□□□ -2.33
TSPAN8-205ENST00000550818 U3KQA8 63 aa0.49□□□□□ -2.33
TSPAN8-205ENST00000550818 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
TSPAN8-205ENST00000550818 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
TSPAN8-205ENST00000550818 MTORP42345 2549 aa0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 LRRK2Q5S007 2527 aa0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 CEP250Q9BV73 2442 aa0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 SPENQ96T58 3664 aaKnown RBP0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 TMEM167AQ8TBQ9 72 aa0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 TACC2O95359 2948 aa0.48□□□□□ -2.33
TSPAN8-205ENST00000550818 GCN1Q92616 2671 aaKnown RBP0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 PKD1P98161 4303 aa0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 TNP1P09430 55 aa0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 ANK3Q12955 4377 aaKnown RBP0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 NBPF19A0A087WUL8 3843 aa0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 FLNBO75369 2602 aaKnown RBP0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 USP9YO00507 2555 aaPredicted RBP0.47□□□□□ -2.33
TSPAN8-205ENST00000550818 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
TSPAN8-205ENST00000550818 CRYBG3Q68DQ2 2970 aa0.46□□□□□ -2.34
TSPAN8-205ENST00000550818 NBEAL2Q6ZNJ1 2754 aa0.46□□□□□ -2.34
TSPAN8-205ENST00000550818 DNAH2Q9P225 4427 aa0.46□□□□□ -2.34
TSPAN8-205ENST00000550818 ZFHX4Q86UP3 3567 aa0.46□□□□□ -2.34
TSPAN8-205ENST00000550818 NCOR2Q9Y618 2525 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 ITPR3Q14573 2671 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 SPG11Q96JI7 2443 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 STAB1Q9NY15 2570 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 H3BSH0 61 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 PRM1P04553 51 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 NBEAQ8NFP9 2946 aa0.45□□□□□ -2.34
TSPAN8-205ENST00000550818 COL7A1Q02388 2944 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 HSPG2P98160 4391 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 UTP20O75691 2785 aaKnown RBP0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 LAMA5O15230 3695 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 ANKHD1Q8IWZ3 2542 aaKnown RBP0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 DNAH8Q96JB1 4490 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 DMXL1Q9Y485 3027 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 HIVEP1P15822 2718 aa0.44□□□□□ -2.34
TSPAN8-205ENST00000550818 FLGP20930 4061 aaPredicted RBP0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 SPTBN5Q9NRC6 3674 aaKnown RBP0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 DNAH7Q8WXX0 4024 aa0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 ACACBO00763 2458 aa0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 RANBP2P49792 3224 aaKnown RBP0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 HECTD4Q9Y4D8 3996 aa0.43□□□□□ -2.34
TSPAN8-205ENST00000550818 CUBNO60494 3623 aa0.42□□□□□ -2.34
TSPAN8-205ENST00000550818 USP9XQ93008 2570 aaPredicted RBP0.42□□□□□ -2.34
TSPAN8-205ENST00000550818 SONP18583 2426 aaKnown RBP0.42□□□□□ -2.34
TSPAN8-205ENST00000550818 KRTAP8-1Q8IUC2 63 aa0.42□□□□□ -2.34
TSPAN8-205ENST00000550818 TLN2Q9Y4G6 2542 aa0.42□□□□□ -2.34
TSPAN8-205ENST00000550818 CFAP54Q96N23 3096 aa0.41□□□□□ -2.34
TSPAN8-205ENST00000550818 DMXL2Q8TDJ6 3036 aa0.41□□□□□ -2.34
TSPAN8-205ENST00000550818 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
TSPAN8-205ENST00000550818 SPRR2DP22532 72 aa0.41□□□□□ -2.34
TSPAN8-205ENST00000550818 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
TSPAN8-205ENST00000550818 RELNP78509 3460 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms