RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 OXTP01178 125 aa7.36□□□□□ -1.23
RAB3IP-212ENST00000550536 WDFY3Q8IZQ1 3526 aa7.35□□□□□ -1.23
RAB3IP-212ENST00000550536 NF1P21359 2839 aa7.34□□□□□ -1.23
RAB3IP-212ENST00000550536 ATMQ13315 3056 aa7.34□□□□□ -1.23
RAB3IP-212ENST00000550536 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.24
RAB3IP-212ENST00000550536 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
RAB3IP-212ENST00000550536 PANO1I0J062 215 aa7.32□□□□□ -1.24
RAB3IP-212ENST00000550536 NIPBLQ6KC79 2804 aaeCLIP7.31□□□□□ -1.24
RAB3IP-212ENST00000550536 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
RAB3IP-212ENST00000550536 EYSQ5T1H1 3165 aa7.28□□□□□ -1.24
RAB3IP-212ENST00000550536 DMXL1Q9Y485 3027 aa7.28□□□□□ -1.24
RAB3IP-212ENST00000550536 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
RAB3IP-212ENST00000550536 A0A087X002 238 aa7.28□□□□□ -1.24
RAB3IP-212ENST00000550536 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
RAB3IP-212ENST00000550536 RPS29P62273 56 aaKnown RBP7.25□□□□□ -1.25
RAB3IP-212ENST00000550536 FBN2P35556 2912 aa7.24□□□□□ -1.25
RAB3IP-212ENST00000550536 KRTAP29-1A8MX34 341 aaPredicted RBP7.23□□□□□ -1.25
RAB3IP-212ENST00000550536 HRNRQ86YZ3 2850 aaPredicted RBP7.23□□□□□ -1.25
RAB3IP-212ENST00000550536 MYO15AQ9UKN7 3530 aa7.22□□□□□ -1.25
RAB3IP-212ENST00000550536 NBPF19A0A087WUL8 3843 aa7.16□□□□□ -1.26
RAB3IP-212ENST00000550536 A8MUU9 505 aa7.14□□□□□ -1.27
RAB3IP-212ENST00000550536 CELSR1Q9NYQ6 3014 aa7.13□□□□□ -1.27
RAB3IP-212ENST00000550536 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
RAB3IP-212ENST00000550536 ASPMQ8IZT6 3477 aa7.11□□□□□ -1.27
RAB3IP-212ENST00000550536 Q6ZRN7 208 aaPredicted RBP7.09□□□□□ -1.28
RAB3IP-212ENST00000550536 TENM3Q9P273 2699 aa7.08□□□□□ -1.28
RAB3IP-212ENST00000550536 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
RAB3IP-212ENST00000550536 TENM4Q6N022 2769 aa7.07□□□□□ -1.28
RAB3IP-212ENST00000550536 LAMA5O15230 3695 aa7.06□□□□□ -1.28
RAB3IP-212ENST00000550536 LOC400499M0QZD8 3231 aa7.05□□□□□ -1.28
RAB3IP-212ENST00000550536 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
RAB3IP-212ENST00000550536 MXRA5Q9NR99 2828 aa7.04□□□□□ -1.28
RAB3IP-212ENST00000550536 PDZD2O15018 2839 aa7.03□□□□□ -1.28
RAB3IP-212ENST00000550536 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
RAB3IP-212ENST00000550536 TGP01266 2768 aa7.02□□□□□ -1.29
RAB3IP-212ENST00000550536 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
RAB3IP-212ENST00000550536 A8MU10 97 aa7□□□□□ -1.29
RAB3IP-212ENST00000550536 KRTAP13-2Q52LG2 175 aa6.99□□□□□ -1.29
RAB3IP-212ENST00000550536 A6NN06 94 aa6.98□□□□□ -1.29
RAB3IP-212ENST00000550536 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
RAB3IP-212ENST00000550536 VWFP04275 2813 aa6.97□□□□□ -1.29
RAB3IP-212ENST00000550536 KRTAP7-1Q8IUC3 87 aa6.95□□□□□ -1.3
RAB3IP-212ENST00000550536 PKD1L1Q8TDX9 2849 aa6.94□□□□□ -1.3
RAB3IP-212ENST00000550536 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
RAB3IP-212ENST00000550536 TNP1P09430 55 aa6.91□□□□□ -1.3
RAB3IP-212ENST00000550536 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
RAB3IP-212ENST00000550536 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
RAB3IP-212ENST00000550536 RELNP78509 3460 aa6.82□□□□□ -1.32
RAB3IP-212ENST00000550536 ZFHX3Q15911 3703 aa6.82□□□□□ -1.32
RAB3IP-212ENST00000550536 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
RAB3IP-212ENST00000550536 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
RAB3IP-212ENST00000550536 DMDP11532 3685 aa6.81□□□□□ -1.32
RAB3IP-212ENST00000550536 CSMD1Q96PZ7 3565 aa6.78□□□□□ -1.32
RAB3IP-212ENST00000550536 TENM2Q9NT68 2774 aa6.77□□□□□ -1.33
RAB3IP-212ENST00000550536 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
RAB3IP-212ENST00000550536 ZFHX4Q86UP3 3567 aa6.76□□□□□ -1.33
RAB3IP-212ENST00000550536 DCHS1Q96JQ0 3298 aa6.72□□□□□ -1.33
RAB3IP-212ENST00000550536 XP32Q5T750 250 aa6.7□□□□□ -1.34
RAB3IP-212ENST00000550536 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
RAB3IP-212ENST00000550536 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
RAB3IP-212ENST00000550536 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
RAB3IP-212ENST00000550536 COL7A1Q02388 2944 aa6.61□□□□□ -1.35
RAB3IP-212ENST00000550536 VPS13CQ709C8 3753 aa6.61□□□□□ -1.35
RAB3IP-212ENST00000550536 H0YAA0 97 aa6.6□□□□□ -1.35
RAB3IP-212ENST00000550536 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
RAB3IP-212ENST00000550536 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
RAB3IP-212ENST00000550536 FBN1P35555 2871 aaKnown RBP6.57□□□□□ -1.36
RAB3IP-212ENST00000550536 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
RAB3IP-212ENST00000550536 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
RAB3IP-212ENST00000550536 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
RAB3IP-212ENST00000550536 P0C880 135 aa6.48□□□□□ -1.37
RAB3IP-212ENST00000550536 TRRAPQ9Y4A5 3859 aa6.48□□□□□ -1.37
RAB3IP-212ENST00000550536 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
RAB3IP-212ENST00000550536 MEGF8Q7Z7M0 2845 aa6.44□□□□□ -1.38
RAB3IP-212ENST00000550536 CUBNO60494 3623 aa6.41□□□□□ -1.38
RAB3IP-212ENST00000550536 BSNQ9UPA5 3926 aa6.39□□□□□ -1.39
RAB3IP-212ENST00000550536 FBN3Q75N90 2809 aa6.36□□□□□ -1.39
RAB3IP-212ENST00000550536 AKAP9Q99996 3911 aa6.33□□□□□ -1.4
RAB3IP-212ENST00000550536 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
RAB3IP-212ENST00000550536 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
RAB3IP-212ENST00000550536 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
RAB3IP-212ENST00000550536 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
RAB3IP-212ENST00000550536 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.43
RAB3IP-212ENST00000550536 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
RAB3IP-212ENST00000550536 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
RAB3IP-212ENST00000550536 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
RAB3IP-212ENST00000550536 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
RAB3IP-212ENST00000550536 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
RAB3IP-212ENST00000550536 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
RAB3IP-212ENST00000550536 LYSTQ99698 3801 aa5.76□□□□□ -1.49
RAB3IP-212ENST00000550536 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
RAB3IP-212ENST00000550536 ANK3Q12955 4377 aaKnown RBP5.74□□□□□ -1.49
RAB3IP-212ENST00000550536 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
RAB3IP-212ENST00000550536 INE1O15225 51 aa5.67□□□□□ -1.5
RAB3IP-212ENST00000550536 DNAH7Q8WXX0 4024 aa5.6□□□□□ -1.51
RAB3IP-212ENST00000550536 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.51
RAB3IP-212ENST00000550536 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
RAB3IP-212ENST00000550536 HUWE1Q7Z6Z7 4374 aaKnown RBP5.57□□□□□ -1.52
RAB3IP-212ENST00000550536 CMYA5Q8N3K9 4069 aa5.56□□□□□ -1.52
RAB3IP-212ENST00000550536 KRTAP3-3Q9BYR6 98 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms