RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 A0A1B0GVX0 72 aa10.57□□□□□ -0.72
SMARCC2-210ENST00000550519 UBE2V1Q13404 147 aa10.56□□□□□ -0.72
SMARCC2-210ENST00000550519 PSMB2P49721 201 aa10.55□□□□□ -0.72
SMARCC2-210ENST00000550519 ZCCHC13Q8WW36 166 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-210ENST00000550519 COX6CP09669 75 aa10.53□□□□□ -0.72
SMARCC2-210ENST00000550519 SPINK7P58062 85 aa10.53□□□□□ -0.72
SMARCC2-210ENST00000550519 K7ERJ3 54 aa10.52□□□□□ -0.73
SMARCC2-210ENST00000550519 VPS25Q9BRG1 176 aa10.5□□□□□ -0.73
SMARCC2-210ENST00000550519 KRTAP19-6Q3LI70 58 aa10.49□□□□□ -0.73
SMARCC2-210ENST00000550519 HSD52Q0P140 79 aa10.48□□□□□ -0.73
SMARCC2-210ENST00000550519 MACF1Q9UPN3 7388 aaKnown RBP10.47□□□□□ -0.73
SMARCC2-210ENST00000550519 RBM3P98179 157 aaKnown RBP10.47□□□□□ -0.73
SMARCC2-210ENST00000550519 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
SMARCC2-210ENST00000550519 J3KT08 172 aa10.45□□□□□ -0.74
SMARCC2-210ENST00000550519 Q8N9P0 234 aaPredicted RBP10.45□□□□□ -0.74
SMARCC2-210ENST00000550519 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
SMARCC2-210ENST00000550519 SYNE2Q8WXH0 6885 aaKnown RBP10.42□□□□□ -0.74
SMARCC2-210ENST00000550519 A8MWP4 228 aa10.42□□□□□ -0.74
SMARCC2-210ENST00000550519 C21orf62-AS1Q17RA5 79 aa10.41□□□□□ -0.74
SMARCC2-210ENST00000550519 Q6ZQT0 140 aa10.39□□□□□ -0.75
SMARCC2-210ENST00000550519 WFDC13Q8IUB5 93 aa10.38□□□□□ -0.75
SMARCC2-210ENST00000550519 C9JAW5 83 aa10.37□□□□□ -0.75
SMARCC2-210ENST00000550519 NDUFB1O75438 58 aa10.37□□□□□ -0.75
SMARCC2-210ENST00000550519 SCGB1C2P0DMR2 95 aa10.35□□□□□ -0.75
SMARCC2-210ENST00000550519 PYY3Q5JQD4 70 aa10.34□□□□□ -0.75
SMARCC2-210ENST00000550519 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
SMARCC2-210ENST00000550519 C8orf17Q9NRJ1 99 aa10.33□□□□□ -0.76
SMARCC2-210ENST00000550519 LYRM7Q5U5X0 104 aa10.3□□□□□ -0.76
SMARCC2-210ENST00000550519 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
SMARCC2-210ENST00000550519 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
SMARCC2-210ENST00000550519 A0A1B0GW54 56 aa10.25□□□□□ -0.77
SMARCC2-210ENST00000550519 Q6ZVQ6 151 aa10.25□□□□□ -0.77
SMARCC2-210ENST00000550519 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
SMARCC2-210ENST00000550519 KRTAP6-3Q3LI67 103 aa10.21□□□□□ -0.77
SMARCC2-210ENST00000550519 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
SMARCC2-210ENST00000550519 H1FX-AS1Q4G0G2 97 aa10.19□□□□□ -0.78
SMARCC2-210ENST00000550519 PRR15Q8IV56 129 aa10.19□□□□□ -0.78
SMARCC2-210ENST00000550519 PDE6GP18545 87 aa10.16□□□□□ -0.78
SMARCC2-210ENST00000550519 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
SMARCC2-210ENST00000550519 MMP24-AS1A0A0U1RRL7 71 aa10.13□□□□□ -0.79
SMARCC2-210ENST00000550519 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
SMARCC2-210ENST00000550519 TMEM254Q8TBM7 123 aa10.13□□□□□ -0.79
SMARCC2-210ENST00000550519 NREPQ16612 68 aa10.1□□□□□ -0.79
SMARCC2-210ENST00000550519 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
SMARCC2-210ENST00000550519 NAA38Q9BRA0 125 aaKnown RBP10.07□□□□□ -0.8
SMARCC2-210ENST00000550519 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
SMARCC2-210ENST00000550519 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
SMARCC2-210ENST00000550519 hDV103S1A0JD37 113 aa10.05□□□□□ -0.8
SMARCC2-210ENST00000550519 NDUFS5O43920 106 aa10.02□□□□□ -0.81
SMARCC2-210ENST00000550519 K7EQZ3 153 aa10.01□□□□□ -0.81
SMARCC2-210ENST00000550519 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
SMARCC2-210ENST00000550519 IGKV2-30P06310 120 aa10□□□□□ -0.81
SMARCC2-210ENST00000550519 Q5W150 140 aa9.99□□□□□ -0.81
SMARCC2-210ENST00000550519 C7orf65Q6ZTY9 151 aa9.98□□□□□ -0.81
SMARCC2-210ENST00000550519 M0R143 59 aa9.97□□□□□ -0.81
SMARCC2-210ENST00000550519 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-210ENST00000550519 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
SMARCC2-210ENST00000550519 BPY2O14599 106 aa9.87□□□□□ -0.83
SMARCC2-210ENST00000550519 A6NN06 94 aa9.84□□□□□ -0.83
SMARCC2-210ENST00000550519 MT1BP07438 61 aa9.84□□□□□ -0.83
SMARCC2-210ENST00000550519 NEBP20929 6669 aa9.84□□□□□ -0.83
SMARCC2-210ENST00000550519 C5orf47Q569G3 176 aa9.83□□□□□ -0.84
SMARCC2-210ENST00000550519 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
SMARCC2-210ENST00000550519 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
SMARCC2-210ENST00000550519 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
SMARCC2-210ENST00000550519 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
SMARCC2-210ENST00000550519 H3BT86 120 aa9.8□□□□□ -0.84
SMARCC2-210ENST00000550519 MUC12Q9UKN1 5478 aa9.79□□□□□ -0.84
SMARCC2-210ENST00000550519 Q8N9L7 120 aa9.79□□□□□ -0.84
SMARCC2-210ENST00000550519 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
SMARCC2-210ENST00000550519 Q5VV11 94 aa9.77□□□□□ -0.85
SMARCC2-210ENST00000550519 KRTAP3-1Q9BYR8 98 aa9.77□□□□□ -0.85
SMARCC2-210ENST00000550519 CXCL6P80162 114 aa9.76□□□□□ -0.85
SMARCC2-210ENST00000550519 SPRR2GQ9BYE4 73 aa9.76□□□□□ -0.85
SMARCC2-210ENST00000550519 S4R3F8 94 aa9.72□□□□□ -0.85
SMARCC2-210ENST00000550519 CSAG1Q6PB30 78 aa9.71□□□□□ -0.86
SMARCC2-210ENST00000550519 KRTAP10-5P60370 271 aa9.69□□□□□ -0.86
SMARCC2-210ENST00000550519 BATFQ16520 125 aa9.68□□□□□ -0.86
SMARCC2-210ENST00000550519 TSTD3H0UI37 97 aa9.67□□□□□ -0.86
SMARCC2-210ENST00000550519 C9orf118A6NHY6 69 aa9.66□□□□□ -0.86
SMARCC2-210ENST00000550519 LCA10Q71F78 164 aa9.66□□□□□ -0.86
SMARCC2-210ENST00000550519 C1orf64Q8NEQ6 169 aa9.65□□□□□ -0.86
SMARCC2-210ENST00000550519 A0A1W2PPM0 123 aa9.64□□□□□ -0.87
SMARCC2-210ENST00000550519 SMIM6P0DI80 62 aa9.61□□□□□ -0.87
SMARCC2-210ENST00000550519 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
SMARCC2-210ENST00000550519 KRTAP5-9P26371 169 aa9.6□□□□□ -0.87
SMARCC2-210ENST00000550519 KLKP1Q107X0 134 aa9.6□□□□□ -0.87
SMARCC2-210ENST00000550519 KRTAP20-1Q3LI63 56 aa9.6□□□□□ -0.87
SMARCC2-210ENST00000550519 KMT2DO14686 5537 aa9.56□□□□□ -0.88
SMARCC2-210ENST00000550519 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
SMARCC2-210ENST00000550519 MDN1Q9NU22 5596 aa9.52□□□□□ -0.89
SMARCC2-210ENST00000550519 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
SMARCC2-210ENST00000550519 TP53AIP1Q9HCN2 124 aa9.47□□□□□ -0.89
SMARCC2-210ENST00000550519 SPCS1Q9Y6A9 102 aa9.46□□□□□ -0.9
SMARCC2-210ENST00000550519 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
SMARCC2-210ENST00000550519 IMUPQ9GZP8 106 aa9.4□□□□□ -0.9
SMARCC2-210ENST00000550519 A0A087WVE0 104 aa9.37□□□□□ -0.91
SMARCC2-210ENST00000550519 CYP4F30PQ9H0H9 118 aa9.37□□□□□ -0.91
SMARCC2-210ENST00000550519 PRO0461Q9UI25 63 aa9.37□□□□□ -0.91
SMARCC2-210ENST00000550519 KRTAP2-3P0C7H8 128 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms