RNA–Protein interactions for RNA: ENST00000549078.5

KRT18-206, Transcript of keratin 18, humanhuman

TSL 5

Gene KRT18, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-206ENST00000549078 Q8N9L7 120 aa11□□□□□ -0.65
KRT18-206ENST00000549078 J3KT08 172 aa10.99□□□□□ -0.65
KRT18-206ENST00000549078 K7EQZ3 153 aa10.96□□□□□ -0.66
KRT18-206ENST00000549078 A8MWP4 228 aa10.95□□□□□ -0.66
KRT18-206ENST00000549078 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
KRT18-206ENST00000549078 RETNLBQ9BQ08 111 aa10.92□□□□□ -0.66
KRT18-206ENST00000549078 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
KRT18-206ENST00000549078 A0A087WVE0 104 aa10.91□□□□□ -0.66
KRT18-206ENST00000549078 NDUFB1O75438 58 aa10.89□□□□□ -0.67
KRT18-206ENST00000549078 J3QL48 77 aa10.88□□□□□ -0.67
KRT18-206ENST00000549078 A0A1B0GVX0 72 aa10.87□□□□□ -0.67
KRT18-206ENST00000549078 IGHV6-1A0A0B4J1U7 121 aa10.86□□□□□ -0.67
KRT18-206ENST00000549078 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
KRT18-206ENST00000549078 NOTCH2NLQ7Z3S9 236 aa10.82□□□□□ -0.68
KRT18-206ENST00000549078 UQCRQO14949 82 aa10.81□□□□□ -0.68
KRT18-206ENST00000549078 C8orf17Q9NRJ1 99 aa10.8□□□□□ -0.68
KRT18-206ENST00000549078 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
KRT18-206ENST00000549078 HCG22E2RYF7 251 aa10.78□□□□□ -0.68
KRT18-206ENST00000549078 COX7CP15954 63 aa10.78□□□□□ -0.68
KRT18-206ENST00000549078 ATOX1O00244 68 aa10.78□□□□□ -0.68
KRT18-206ENST00000549078 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
KRT18-206ENST00000549078 FP248Q71RG6 208 aaPredicted RBP10.76□□□□□ -0.69
KRT18-206ENST00000549078 C8orf87E5RJ46 101 aa10.75□□□□□ -0.69
KRT18-206ENST00000549078 LINC00313P59037 77 aa10.75□□□□□ -0.69
KRT18-206ENST00000549078 CASC2Q6XLA1 102 aa10.73□□□□□ -0.69
KRT18-206ENST00000549078 SMIM20Q8N5G0 67 aa10.72□□□□□ -0.69
KRT18-206ENST00000549078 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
KRT18-206ENST00000549078 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
KRT18-206ENST00000549078 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.69
KRT18-206ENST00000549078 PRR4Q16378 134 aa10.69□□□□□ -0.7
KRT18-206ENST00000549078 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
KRT18-206ENST00000549078 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
KRT18-206ENST00000549078 KRTAP16-1A8MUX0 517 aa10.67□□□□□ -0.7
KRT18-206ENST00000549078 TMEM254Q8TBM7 123 aa10.67□□□□□ -0.7
KRT18-206ENST00000549078 MRPL34Q9BQ48 92 aaKnown RBP10.65□□□□□ -0.7
KRT18-206ENST00000549078 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
KRT18-206ENST00000549078 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
KRT18-206ENST00000549078 Q8N9P0 234 aaPredicted RBP10.57□□□□□ -0.72
KRT18-206ENST00000549078 OCR1Q9BZK8 76 aa10.57□□□□□ -0.72
KRT18-206ENST00000549078 NDUFS5O43920 106 aa10.56□□□□□ -0.72
KRT18-206ENST00000549078 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
KRT18-206ENST00000549078 HERC1Q15751 4861 aa10.52□□□□□ -0.72
KRT18-206ENST00000549078 TMEM258P61165 79 aa10.51□□□□□ -0.73
KRT18-206ENST00000549078 C20orf166-AS1Q96NR2 134 aa10.51□□□□□ -0.73
KRT18-206ENST00000549078 A8MUU9 505 aa10.5□□□□□ -0.73
KRT18-206ENST00000549078 TRAV7A0A075B6U4 112 aa10.49□□□□□ -0.73
KRT18-206ENST00000549078 XP32Q5T750 250 aa10.49□□□□□ -0.73
KRT18-206ENST00000549078 TP53AIP1Q9HCN2 124 aa10.48□□□□□ -0.73
KRT18-206ENST00000549078 LPAP08519 4548 aa10.47□□□□□ -0.73
KRT18-206ENST00000549078 RPS28P62857 69 aaKnown RBP10.47□□□□□ -0.73
KRT18-206ENST00000549078 Q75L30 129 aa10.45□□□□□ -0.74
KRT18-206ENST00000549078 C20orf197Q8N268 126 aa10.44□□□□□ -0.74
KRT18-206ENST00000549078 Q5W150 140 aa10.43□□□□□ -0.74
KRT18-206ENST00000549078 RPL37P61927 97 aaKnown RBP10.39□□□□□ -0.75
KRT18-206ENST00000549078 H7BZZ5 65 aa10.38□□□□□ -0.75
KRT18-206ENST00000549078 C5orf47Q569G3 176 aa10.38□□□□□ -0.75
KRT18-206ENST00000549078 TRAV22A0A0B4J277 110 aa10.37□□□□□ -0.75
KRT18-206ENST00000549078 ZCCHC13Q8WW36 166 aaKnown RBP10.37□□□□□ -0.75
KRT18-206ENST00000549078 KLKP1Q107X0 134 aa10.37□□□□□ -0.75
KRT18-206ENST00000549078 LRP2P98164 4655 aa10.36□□□□□ -0.75
KRT18-206ENST00000549078 H0Y9P7 68 aa10.36□□□□□ -0.75
KRT18-206ENST00000549078 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
KRT18-206ENST00000549078 MP68P56378 58 aa10.32□□□□□ -0.76
KRT18-206ENST00000549078 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
KRT18-206ENST00000549078 ATP11AUNQ6ZP68 121 aa10.31□□□□□ -0.76
KRT18-206ENST00000549078 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
KRT18-206ENST00000549078 FAM236DA0A1B0GTK5 79 aa10.29□□□□□ -0.76
KRT18-206ENST00000549078 FAM236CP0DP71 79 aa10.29□□□□□ -0.76
KRT18-206ENST00000549078 A0A0U1RQV1 116 aa10.27□□□□□ -0.76
KRT18-206ENST00000549078 C1orf64Q8NEQ6 169 aa10.26□□□□□ -0.77
KRT18-206ENST00000549078 H3BPC8 53 aa10.25□□□□□ -0.77
KRT18-206ENST00000549078 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
KRT18-206ENST00000549078 IGKV2-30P06310 120 aa10.21□□□□□ -0.78
KRT18-206ENST00000549078 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
KRT18-206ENST00000549078 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
KRT18-206ENST00000549078 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
KRT18-206ENST00000549078 NDUFC1O43677 76 aa10.18□□□□□ -0.78
KRT18-206ENST00000549078 CYP4F30PQ9H0H9 118 aa10.18□□□□□ -0.78
KRT18-206ENST00000549078 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
KRT18-206ENST00000549078 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
KRT18-206ENST00000549078 SPINK7P58062 85 aa10.14□□□□□ -0.79
KRT18-206ENST00000549078 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
KRT18-206ENST00000549078 MUC17Q685J3 4493 aa10.11□□□□□ -0.79
KRT18-206ENST00000549078 ATP5EP56381 51 aaPredicted RBP10.08□□□□□ -0.8
KRT18-206ENST00000549078 KRTAP4-1Q9BYQ7 146 aa10.03□□□□□ -0.8
KRT18-206ENST00000549078 SMIM26A0A096LP01 95 aa10.01□□□□□ -0.81
KRT18-206ENST00000549078 HRES1P13985 223 aa10.01□□□□□ -0.81
KRT18-206ENST00000549078 SPANXA2-OT1Q8N9U9 137 aa9.91□□□□□ -0.82
KRT18-206ENST00000549078 UBR4Q5T4S7 5183 aa9.91□□□□□ -0.82
KRT18-206ENST00000549078 MPLKIPQ8TAP9 179 aa9.87□□□□□ -0.83
KRT18-206ENST00000549078 MUC2Q02817 5179 aa9.85□□□□□ -0.83
KRT18-206ENST00000549078 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
KRT18-206ENST00000549078 KRTAP3-1Q9BYR8 98 aa9.84□□□□□ -0.83
KRT18-206ENST00000549078 RNF213Q63HN8 5207 aa9.8□□□□□ -0.84
KRT18-206ENST00000549078 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
KRT18-206ENST00000549078 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
KRT18-206ENST00000549078 A8MUN3 132 aa9.74□□□□□ -0.85
KRT18-206ENST00000549078 PRO0628Q9UI54 55 aa9.73□□□□□ -0.85
KRT18-206ENST00000549078 KRTAP19-2Q3LHN2 52 aa9.71□□□□□ -0.85
KRT18-206ENST00000549078 ACYP2P14621 99 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms