RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 KRTAP9-3Q9BYQ3 159 aa11.39□□□□□ -0.59
SMARCD1-204ENST00000547637 FXYD2P54710 66 aa11.38□□□□□ -0.59
SMARCD1-204ENST00000547637 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
SMARCD1-204ENST00000547637 A0A1B0GVX0 72 aa11.34□□□□□ -0.59
SMARCD1-204ENST00000547637 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
SMARCD1-204ENST00000547637 C21orf62-AS1Q17RA5 79 aa11.32□□□□□ -0.6
SMARCD1-204ENST00000547637 FCGBPQ9Y6R7 5405 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-204ENST00000547637 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-204ENST00000547637 J3KT08 172 aa11.3□□□□□ -0.6
SMARCD1-204ENST00000547637 DSCR8Q96T75 97 aa11.3□□□□□ -0.6
SMARCD1-204ENST00000547637 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-204ENST00000547637 SPINK7P58062 85 aa11.28□□□□□ -0.6
SMARCD1-204ENST00000547637 HSD52Q0P140 79 aa11.26□□□□□ -0.61
SMARCD1-204ENST00000547637 NDUFB1O75438 58 aa11.25□□□□□ -0.61
SMARCD1-204ENST00000547637 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
SMARCD1-204ENST00000547637 A8MWP4 228 aa11.22□□□□□ -0.61
SMARCD1-204ENST00000547637 K7ERJ3 54 aa11.22□□□□□ -0.61
SMARCD1-204ENST00000547637 SCGB1C2P0DMR2 95 aa11.21□□□□□ -0.61
SMARCD1-204ENST00000547637 MACF1Q9UPN3 7388 aaKnown RBP11.21□□□□□ -0.62
SMARCD1-204ENST00000547637 C9JAW5 83 aa11.19□□□□□ -0.62
SMARCD1-204ENST00000547637 Q8N9P0 234 aaPredicted RBP11.16□□□□□ -0.62
SMARCD1-204ENST00000547637 Q6ZQT0 140 aa11.13□□□□□ -0.63
SMARCD1-204ENST00000547637 WFDC13Q8IUB5 93 aa11.13□□□□□ -0.63
SMARCD1-204ENST00000547637 KRTAP19-6Q3LI70 58 aa11.12□□□□□ -0.63
SMARCD1-204ENST00000547637 SYNE2Q8WXH0 6885 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-204ENST00000547637 BAALC-AS2P0C853 105 aa11.11□□□□□ -0.63
SMARCD1-204ENST00000547637 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
SMARCD1-204ENST00000547637 A0A1B0GW54 56 aa11.06□□□□□ -0.64
SMARCD1-204ENST00000547637 UQCR10Q9UDW1 63 aa11.05□□□□□ -0.64
SMARCD1-204ENST00000547637 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
SMARCD1-204ENST00000547637 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
SMARCD1-204ENST00000547637 Q6ZVQ6 151 aa11.01□□□□□ -0.65
SMARCD1-204ENST00000547637 IGKV3D-7A0A0C4DH55 119 aa11□□□□□ -0.65
SMARCD1-204ENST00000547637 PDE6GP18545 87 aa11□□□□□ -0.65
SMARCD1-204ENST00000547637 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
SMARCD1-204ENST00000547637 H1FX-AS1Q4G0G2 97 aa10.95□□□□□ -0.66
SMARCD1-204ENST00000547637 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
SMARCD1-204ENST00000547637 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
SMARCD1-204ENST00000547637 NREPQ16612 68 aa10.91□□□□□ -0.66
SMARCD1-204ENST00000547637 MRPL34Q9BQ48 92 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-204ENST00000547637 TMEM254Q8TBM7 123 aa10.89□□□□□ -0.67
SMARCD1-204ENST00000547637 NDUFS5O43920 106 aa10.87□□□□□ -0.67
SMARCD1-204ENST00000547637 KRTAP6-3Q3LI67 103 aa10.85□□□□□ -0.67
SMARCD1-204ENST00000547637 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
SMARCD1-204ENST00000547637 hDV103S1A0JD37 113 aa10.82□□□□□ -0.68
SMARCD1-204ENST00000547637 MMP24-AS1A0A0U1RRL7 71 aa10.81□□□□□ -0.68
SMARCD1-204ENST00000547637 M0R143 59 aa10.79□□□□□ -0.68
SMARCD1-204ENST00000547637 IGKV2D-30A0A075B6S6 120 aa10.77□□□□□ -0.69
SMARCD1-204ENST00000547637 IGKV2-30P06310 120 aa10.77□□□□□ -0.69
SMARCD1-204ENST00000547637 C7orf65Q6ZTY9 151 aa10.76□□□□□ -0.69
SMARCD1-204ENST00000547637 NAA38Q9BRA0 125 aaKnown RBP10.74□□□□□ -0.69
SMARCD1-204ENST00000547637 K7EQZ3 153 aa10.71□□□□□ -0.69
SMARCD1-204ENST00000547637 BPY2O14599 106 aa10.67□□□□□ -0.7
SMARCD1-204ENST00000547637 FAM236AA0A1B0GUQ0 79 aa10.62□□□□□ -0.71
SMARCD1-204ENST00000547637 FAM236BA0A1B0GV22 79 aa10.62□□□□□ -0.71
SMARCD1-204ENST00000547637 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-204ENST00000547637 Q5W150 140 aa10.61□□□□□ -0.71
SMARCD1-204ENST00000547637 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
SMARCD1-204ENST00000547637 CASC2Q6XLA1 102 aa10.58□□□□□ -0.72
SMARCD1-204ENST00000547637 A6NN06 94 aa10.57□□□□□ -0.72
SMARCD1-204ENST00000547637 HCG22E2RYF7 251 aa10.57□□□□□ -0.72
SMARCD1-204ENST00000547637 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
SMARCD1-204ENST00000547637 H3BT86 120 aa10.54□□□□□ -0.72
SMARCD1-204ENST00000547637 CXCL6P80162 114 aa10.54□□□□□ -0.72
SMARCD1-204ENST00000547637 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
SMARCD1-204ENST00000547637 Q5VV11 94 aa10.5□□□□□ -0.73
SMARCD1-204ENST00000547637 CSAG1Q6PB30 78 aa10.49□□□□□ -0.73
SMARCD1-204ENST00000547637 S4R3F8 94 aa10.47□□□□□ -0.73
SMARCD1-204ENST00000547637 Q8N9L7 120 aa10.46□□□□□ -0.73
SMARCD1-204ENST00000547637 BATFQ16520 125 aa10.44□□□□□ -0.74
SMARCD1-204ENST00000547637 NEBP20929 6669 aa10.44□□□□□ -0.74
SMARCD1-204ENST00000547637 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
SMARCD1-204ENST00000547637 MT1BP07438 61 aa10.38□□□□□ -0.75
SMARCD1-204ENST00000547637 C1orf64Q8NEQ6 169 aa10.38□□□□□ -0.75
SMARCD1-204ENST00000547637 SPRR2GQ9BYE4 73 aa10.38□□□□□ -0.75
SMARCD1-204ENST00000547637 KRTAP19-8Q3LI54 63 aa10.35□□□□□ -0.75
SMARCD1-204ENST00000547637 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
SMARCD1-204ENST00000547637 SMIM6P0DI80 62 aa10.33□□□□□ -0.76
SMARCD1-204ENST00000547637 LCA10Q71F78 164 aa10.33□□□□□ -0.76
SMARCD1-204ENST00000547637 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
SMARCD1-204ENST00000547637 UBL5Q9BZL1 73 aa10.33□□□□□ -0.76
SMARCD1-204ENST00000547637 KLKP1Q107X0 134 aa10.29□□□□□ -0.76
SMARCD1-204ENST00000547637 KRTAP10-5P60370 271 aa10.28□□□□□ -0.76
SMARCD1-204ENST00000547637 TP53AIP1Q9HCN2 124 aa10.26□□□□□ -0.77
SMARCD1-204ENST00000547637 TAX1BP3O14907 124 aa10.25□□□□□ -0.77
SMARCD1-204ENST00000547637 KRTAP20-1Q3LI63 56 aa10.25□□□□□ -0.77
SMARCD1-204ENST00000547637 MUC12Q9UKN1 5478 aa10.23□□□□□ -0.77
SMARCD1-204ENST00000547637 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
SMARCD1-204ENST00000547637 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
SMARCD1-204ENST00000547637 SPCS1Q9Y6A9 102 aa10.19□□□□□ -0.78
SMARCD1-204ENST00000547637 KRTAP5-9P26371 169 aa10.16□□□□□ -0.78
SMARCD1-204ENST00000547637 SMCPP49901 116 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-204ENST00000547637 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
SMARCD1-204ENST00000547637 CYP4F30PQ9H0H9 118 aa10.04□□□□□ -0.8
SMARCD1-204ENST00000547637 LOC101927531A0A1B0GV80 90 aa9.96□□□□□ -0.82
SMARCD1-204ENST00000547637 NDUFC1O43677 76 aa9.95□□□□□ -0.82
SMARCD1-204ENST00000547637 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
SMARCD1-204ENST00000547637 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
SMARCD1-204ENST00000547637 KMT2DO14686 5537 aa9.93□□□□□ -0.82
SMARCD1-204ENST00000547637 PRO2289Q9P1D8 64 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms