RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
BRF1-212ENST00000547562 Q6ZSA8 131 aa9.14□□□□□ -0.95
BRF1-212ENST00000547562 CD164Q04900 197 aa9.13□□□□□ -0.95
BRF1-212ENST00000547562 PKD1P98161 4303 aa9.13□□□□□ -0.95
BRF1-212ENST00000547562 SSBP3-AS1Q7Z2R9 100 aa9.13□□□□□ -0.95
BRF1-212ENST00000547562 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
BRF1-212ENST00000547562 A0A087X002 238 aa9.11□□□□□ -0.95
BRF1-212ENST00000547562 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
BRF1-212ENST00000547562 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
BRF1-212ENST00000547562 NDUFS5O43920 106 aa9.1□□□□□ -0.95
BRF1-212ENST00000547562 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
BRF1-212ENST00000547562 FAT2Q9NYQ8 4349 aa9.09□□□□□ -0.95
BRF1-212ENST00000547562 HYDINQ4G0P3 5121 aa9.09□□□□□ -0.95
BRF1-212ENST00000547562 V9GYY9 64 aa9.07□□□□□ -0.96
BRF1-212ENST00000547562 LRP1BQ9NZR2 4599 aa9.05□□□□□ -0.96
BRF1-212ENST00000547562 SEC61GP60059 68 aa9.05□□□□□ -0.96
BRF1-212ENST00000547562 Q1T7F1 81 aa9.04□□□□□ -0.96
BRF1-212ENST00000547562 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
BRF1-212ENST00000547562 KRTAP13-2Q52LG2 175 aa9.03□□□□□ -0.96
BRF1-212ENST00000547562 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.97
BRF1-212ENST00000547562 PCOTHQ58A44 107 aa9.02□□□□□ -0.97
BRF1-212ENST00000547562 C8orf87E5RJ46 101 aa8.99□□□□□ -0.97
BRF1-212ENST00000547562 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
BRF1-212ENST00000547562 KRTAP1-4P0C5Y4 121 aa8.97□□□□□ -0.97
BRF1-212ENST00000547562 PSPHP1O15172 72 aa8.95□□□□□ -0.98
BRF1-212ENST00000547562 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
BRF1-212ENST00000547562 Q5W150 140 aa8.94□□□□□ -0.98
BRF1-212ENST00000547562 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
BRF1-212ENST00000547562 LINC00313P59037 77 aa8.92□□□□□ -0.98
BRF1-212ENST00000547562 COA5Q86WW8 74 aa8.92□□□□□ -0.98
BRF1-212ENST00000547562 PMAIP1Q13794 54 aa8.91□□□□□ -0.98
BRF1-212ENST00000547562 A8MU10 97 aa8.9□□□□□ -0.99
BRF1-212ENST00000547562 Q8N9P0 234 aaPredicted RBP8.9□□□□□ -0.99
BRF1-212ENST00000547562 LIMD2Q9BT23 127 aa8.89□□□□□ -0.99
BRF1-212ENST00000547562 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
BRF1-212ENST00000547562 PKHD1P08F94 4074 aa8.88□□□□□ -0.99
BRF1-212ENST00000547562 SACSQ9NZJ4 4579 aa8.85□□□□□ -0.99
BRF1-212ENST00000547562 A8MUN3 132 aa8.85□□□□□ -0.99
BRF1-212ENST00000547562 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
BRF1-212ENST00000547562 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
BRF1-212ENST00000547562 FAM229AH3BQW9 127 aa8.83□□□□□ -1
BRF1-212ENST00000547562 KRTAP16-1A8MUX0 517 aa8.82□□□□□ -1
BRF1-212ENST00000547562 HRES1P13985 223 aa8.82□□□□□ -1
BRF1-212ENST00000547562 SPINK1P00995 79 aa8.81□□□□□ -1
BRF1-212ENST00000547562 Q5VV11 94 aa8.8□□□□□ -1
BRF1-212ENST00000547562 RETNLBQ9BQ08 111 aa8.78□□□□□ -1
BRF1-212ENST00000547562 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
BRF1-212ENST00000547562 IGKV2-30P06310 120 aa8.74□□□□□ -1.01
BRF1-212ENST00000547562 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
BRF1-212ENST00000547562 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
BRF1-212ENST00000547562 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
BRF1-212ENST00000547562 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
BRF1-212ENST00000547562 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
BRF1-212ENST00000547562 SPAG11AQ6PDA7 123 aa8.72□□□□□ -1.01
BRF1-212ENST00000547562 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.01
BRF1-212ENST00000547562 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
BRF1-212ENST00000547562 ACYP2P14621 99 aa8.7□□□□□ -1.02
BRF1-212ENST00000547562 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
BRF1-212ENST00000547562 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
BRF1-212ENST00000547562 Q75L30 129 aa8.69□□□□□ -1.02
BRF1-212ENST00000547562 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
BRF1-212ENST00000547562 LCA10Q71F78 164 aa8.64□□□□□ -1.03
BRF1-212ENST00000547562 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
BRF1-212ENST00000547562 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
BRF1-212ENST00000547562 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
BRF1-212ENST00000547562 FAT1Q14517 4588 aa8.62□□□□□ -1.03
BRF1-212ENST00000547562 KTN1-AS1Q86SY8 53 aa8.6□□□□□ -1.03
BRF1-212ENST00000547562 A6NED7 52 aa8.59□□□□□ -1.03
BRF1-212ENST00000547562 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.04
BRF1-212ENST00000547562 RYR2Q92736 4967 aa8.58□□□□□ -1.04
BRF1-212ENST00000547562 RBM12B-AS1Q9P1G2 102 aa8.57□□□□□ -1.04
BRF1-212ENST00000547562 A6NN06 94 aa8.54□□□□□ -1.04
BRF1-212ENST00000547562 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
BRF1-212ENST00000547562 C7orf65Q6ZTY9 151 aa8.52□□□□□ -1.05
BRF1-212ENST00000547562 KMT2CQ8NEZ4 4911 aaKnown RBP8.5□□□□□ -1.05
BRF1-212ENST00000547562 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
BRF1-212ENST00000547562 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
BRF1-212ENST00000547562 SPINK7P58062 85 aa8.49□□□□□ -1.05
BRF1-212ENST00000547562 C20orf166-AS1Q96NR2 134 aa8.48□□□□□ -1.05
BRF1-212ENST00000547562 A8MUU9 505 aa8.48□□□□□ -1.05
BRF1-212ENST00000547562 FLG2Q5D862 2391 aaPredicted RBP8.42□□□□□ -1.06
BRF1-212ENST00000547562 A0A1B0GU69 56 aa8.42□□□□□ -1.06
BRF1-212ENST00000547562 Q8N1X5 172 aa8.41□□□□□ -1.06
BRF1-212ENST00000547562 TNXBP22105 4242 aa8.32□□□□□ -1.08
BRF1-212ENST00000547562 Q5VSD8 79 aa8.31□□□□□ -1.08
BRF1-212ENST00000547562 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
BRF1-212ENST00000547562 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
BRF1-212ENST00000547562 HSPG2P98160 4391 aa8.3□□□□□ -1.08
BRF1-212ENST00000547562 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
BRF1-212ENST00000547562 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
BRF1-212ENST00000547562 UQCR11O14957 56 aa8.25□□□□□ -1.09
BRF1-212ENST00000547562 PRAC1Q96KF2 57 aa8.25□□□□□ -1.09
BRF1-212ENST00000547562 SPATA8Q6RVD6 105 aa8.24□□□□□ -1.09
BRF1-212ENST00000547562 RYR3Q15413 4870 aa8.23□□□□□ -1.09
BRF1-212ENST00000547562 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
BRF1-212ENST00000547562 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.09
BRF1-212ENST00000547562 RYR1P21817 5038 aa8.2□□□□□ -1.1
BRF1-212ENST00000547562 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
BRF1-212ENST00000547562 COX6B2Q6YFQ2 88 aa8.16□□□□□ -1.1
BRF1-212ENST00000547562 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms