RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 VPS25Q9BRG1 176 aa13.7□□□□□ -0.22
SRSF9-202ENST00000546942 A0A1B0GW54 56 aa13.69□□□□□ -0.22
SRSF9-202ENST00000546942 DEFB116Q30KQ4 102 aa13.67□□□□□ -0.22
SRSF9-202ENST00000546942 LINC00472Q9H8W2 130 aa13.67□□□□□ -0.22
SRSF9-202ENST00000546942 LOC110117498A0A087WWA1 95 aa13.66□□□□□ -0.22
SRSF9-202ENST00000546942 LINC00313P59037 77 aa13.65□□□□□ -0.22
SRSF9-202ENST00000546942 Q6ZQT0 140 aa13.63□□□□□ -0.23
SRSF9-202ENST00000546942 H3BT86 120 aa13.62□□□□□ -0.23
SRSF9-202ENST00000546942 COL5A1-AS1Q5SY13 56 aa13.59□□□□□ -0.23
SRSF9-202ENST00000546942 CRCT1Q9UGL9 99 aa13.57□□□□□ -0.24
SRSF9-202ENST00000546942 FSIP2Q5CZC0 6907 aa13.56□□□□□ -0.24
SRSF9-202ENST00000546942 J3KT08 172 aa13.56□□□□□ -0.24
SRSF9-202ENST00000546942 NOTCH2NLQ7Z3S9 236 aa13.56□□□□□ -0.24
SRSF9-202ENST00000546942 C14orf132Q9NPU4 83 aa13.55□□□□□ -0.24
SRSF9-202ENST00000546942 IGHV6-1A0A0B4J1U7 121 aa13.54□□□□□ -0.24
SRSF9-202ENST00000546942 KRTAP16-1A8MUX0 517 aa13.54□□□□□ -0.24
SRSF9-202ENST00000546942 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.25
SRSF9-202ENST00000546942 C8orf87E5RJ46 101 aa13.46□□□□□ -0.25
SRSF9-202ENST00000546942 A0A1B0GVX0 72 aa13.45□□□□□ -0.26
SRSF9-202ENST00000546942 MTURNQ8N3F0 131 aa13.43□□□□□ -0.26
SRSF9-202ENST00000546942 NDUFB1O75438 58 aa13.42□□□□□ -0.26
SRSF9-202ENST00000546942 NREPQ16612 68 aa13.38□□□□□ -0.27
SRSF9-202ENST00000546942 FAM236DA0A1B0GTK5 79 aa13.37□□□□□ -0.27
SRSF9-202ENST00000546942 FAM236CP0DP71 79 aa13.37□□□□□ -0.27
SRSF9-202ENST00000546942 K7EP34 96 aa13.36□□□□□ -0.27
SRSF9-202ENST00000546942 PCP4L1A6NKN8 68 aa13.35□□□□□ -0.27
SRSF9-202ENST00000546942 A8MWP4 228 aa13.35□□□□□ -0.27
SRSF9-202ENST00000546942 SMCPP49901 116 aaPredicted RBP13.31□□□□□ -0.28
SRSF9-202ENST00000546942 GTF2H5Q6ZYL4 71 aa13.29□□□□□ -0.28
SRSF9-202ENST00000546942 RBM12B-AS1Q9P1G2 102 aa13.29□□□□□ -0.28
SRSF9-202ENST00000546942 PRO0461Q9UI25 63 aa13.29□□□□□ -0.28
SRSF9-202ENST00000546942 HRES1P13985 223 aa13.28□□□□□ -0.28
SRSF9-202ENST00000546942 IGKV3D-7A0A0C4DH55 119 aa13.25□□□□□ -0.29
SRSF9-202ENST00000546942 PRR15Q8IV56 129 aa13.24□□□□□ -0.29
SRSF9-202ENST00000546942 C8orf17Q9NRJ1 99 aa13.24□□□□□ -0.29
SRSF9-202ENST00000546942 MPLKIPQ8TAP9 179 aa13.23□□□□□ -0.29
SRSF9-202ENST00000546942 KRTAP9-8Q9BYQ0 159 aa13.22□□□□□ -0.29
SRSF9-202ENST00000546942 ZCCHC13Q8WW36 166 aaKnown RBP13.21□□□□□ -0.29
SRSF9-202ENST00000546942 Q8N9P0 234 aaPredicted RBP13.19□□□□□ -0.3
SRSF9-202ENST00000546942 F8W1H4 67 aa13.18□□□□□ -0.3
SRSF9-202ENST00000546942 BPY2O14599 106 aa13.15□□□□□ -0.3
SRSF9-202ENST00000546942 Q6ZVQ6 151 aa13.14□□□□□ -0.31
SRSF9-202ENST00000546942 SPINK7P58062 85 aa13.12□□□□□ -0.31
SRSF9-202ENST00000546942 K7EQZ3 153 aa13.09□□□□□ -0.31
SRSF9-202ENST00000546942 TMEM254Q8TBM7 123 aa13.09□□□□□ -0.31
SRSF9-202ENST00000546942 UBL5Q9BZL1 73 aa13.08□□□□□ -0.32
SRSF9-202ENST00000546942 MMP24-AS1A0A0U1RRL7 71 aa13.07□□□□□ -0.32
SRSF9-202ENST00000546942 MT2AP02795 61 aa13.05□□□□□ -0.32
SRSF9-202ENST00000546942 MRPL34Q9BQ48 92 aaKnown RBP13.05□□□□□ -0.32
SRSF9-202ENST00000546942 hDV103S1A0JD37 113 aa13.03□□□□□ -0.32
SRSF9-202ENST00000546942 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
SRSF9-202ENST00000546942 ETDBQ3ZM63 59 aa13.01□□□□□ -0.33
SRSF9-202ENST00000546942 USH2AO75445 5202 aa12.99□□□□□ -0.33
SRSF9-202ENST00000546942 MT1FP04733 61 aa12.95□□□□□ -0.34
SRSF9-202ENST00000546942 WFDC13Q8IUB5 93 aa12.95□□□□□ -0.34
SRSF9-202ENST00000546942 KRTAP10-10P60014 251 aa12.93□□□□□ -0.34
SRSF9-202ENST00000546942 Q8N9L7 120 aa12.9□□□□□ -0.34
SRSF9-202ENST00000546942 NDUFS5O43920 106 aa12.89□□□□□ -0.35
SRSF9-202ENST00000546942 CASC2Q6XLA1 102 aa12.89□□□□□ -0.35
SRSF9-202ENST00000546942 SSPOA2VEC9 5147 aa12.86□□□□□ -0.35
SRSF9-202ENST00000546942 CXCL6P80162 114 aa12.83□□□□□ -0.36
SRSF9-202ENST00000546942 ACYP1P07311 99 aa12.82□□□□□ -0.36
SRSF9-202ENST00000546942 KRTAP9-3Q9BYQ3 159 aa12.81□□□□□ -0.36
SRSF9-202ENST00000546942 HCG22E2RYF7 251 aa12.79□□□□□ -0.36
SRSF9-202ENST00000546942 LCE2BO14633 110 aa12.79□□□□□ -0.36
SRSF9-202ENST00000546942 FAM240AA0A1B0GVK7 77 aa12.76□□□□□ -0.37
SRSF9-202ENST00000546942 IGKV2D-30A0A075B6S6 120 aa12.72□□□□□ -0.37
SRSF9-202ENST00000546942 IGKV2-30P06310 120 aa12.72□□□□□ -0.37
SRSF9-202ENST00000546942 Q5W150 140 aa12.69□□□□□ -0.38
SRSF9-202ENST00000546942 H1FX-AS1Q4G0G2 97 aa12.66□□□□□ -0.38
SRSF9-202ENST00000546942 C7orf65Q6ZTY9 151 aa12.66□□□□□ -0.38
SRSF9-202ENST00000546942 A0A1B0GV90 55 aa12.64□□□□□ -0.39
SRSF9-202ENST00000546942 ATP5EP2Q5VTU8 51 aa12.64□□□□□ -0.39
SRSF9-202ENST00000546942 TP53AIP1Q9HCN2 124 aa12.63□□□□□ -0.39
SRSF9-202ENST00000546942 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.62□□□□□ -0.39
SRSF9-202ENST00000546942 KRTAP19-1Q8IUB9 90 aa12.62□□□□□ -0.39
SRSF9-202ENST00000546942 FCGBPQ9Y6R7 5405 aaPredicted RBP12.58□□□□□ -0.4
SRSF9-202ENST00000546942 KRTAP9-7A8MTY7 169 aa12.49□□□□□ -0.41
SRSF9-202ENST00000546942 C4orf26Q17RF5 130 aa12.49□□□□□ -0.41
SRSF9-202ENST00000546942 LINC00643Q86TS7 51 aa12.48□□□□□ -0.41
SRSF9-202ENST00000546942 HIST1H4AP62805 103 aaKnown RBP12.43□□□□□ -0.42
SRSF9-202ENST00000546942 J3QR89 54 aa12.42□□□□□ -0.42
SRSF9-202ENST00000546942 TRAV22A0A0B4J277 110 aa12.32□□□□□ -0.44
SRSF9-202ENST00000546942 KRTAP19-6Q3LI70 58 aa12.31□□□□□ -0.44
SRSF9-202ENST00000546942 C5orf47Q569G3 176 aa12.29□□□□□ -0.44
SRSF9-202ENST00000546942 UQCRQO14949 82 aa12.28□□□□□ -0.44
SRSF9-202ENST00000546942 LOC101927531A0A1B0GV80 90 aa12.26□□□□□ -0.45
SRSF9-202ENST00000546942 KRTAP3-1Q9BYR8 98 aa12.26□□□□□ -0.45
SRSF9-202ENST00000546942 A0A087WVE0 104 aa12.24□□□□□ -0.45
SRSF9-202ENST00000546942 CYP4F30PQ9H0H9 118 aa12.24□□□□□ -0.45
SRSF9-202ENST00000546942 ATOX1O00244 68 aa12.23□□□□□ -0.45
SRSF9-202ENST00000546942 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
SRSF9-202ENST00000546942 S4R3F8 94 aa12.22□□□□□ -0.45
SRSF9-202ENST00000546942 FAM236AA0A1B0GUQ0 79 aa12.17□□□□□ -0.46
SRSF9-202ENST00000546942 FAM236BA0A1B0GV22 79 aa12.17□□□□□ -0.46
SRSF9-202ENST00000546942 H0Y9P7 68 aa12.14□□□□□ -0.47
SRSF9-202ENST00000546942 LCA10Q71F78 164 aa12.13□□□□□ -0.47
SRSF9-202ENST00000546942 CSAG1Q6PB30 78 aa12.12□□□□□ -0.47
SRSF9-202ENST00000546942 MACF1Q9UPN3 7388 aaKnown RBP12.12□□□□□ -0.47
SRSF9-202ENST00000546942 OCR1Q9BZK8 76 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms