RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 A0A087X002 238 aa6□□□□□ -1.45
SSH1-203ENST00000546433 ZFHX4Q86UP3 3567 aa5.98□□□□□ -1.45
SSH1-203ENST00000546433 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
SSH1-203ENST00000546433 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
SSH1-203ENST00000546433 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
SSH1-203ENST00000546433 UBR5O95071 2799 aaPredicted RBP5.93□□□□□ -1.46
SSH1-203ENST00000546433 FLNCQ14315 2725 aa5.93□□□□□ -1.46
SSH1-203ENST00000546433 LAMA5O15230 3695 aa5.93□□□□□ -1.46
SSH1-203ENST00000546433 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
SSH1-203ENST00000546433 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
SSH1-203ENST00000546433 DMXL1Q9Y485 3027 aa5.92□□□□□ -1.46
SSH1-203ENST00000546433 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
SSH1-203ENST00000546433 KRTAP11-1Q8IUC1 163 aa5.92□□□□□ -1.46
SSH1-203ENST00000546433 ZZEF1O43149 2961 aa5.91□□□□□ -1.46
SSH1-203ENST00000546433 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
SSH1-203ENST00000546433 LRBAP50851 2863 aa5.91□□□□□ -1.46
SSH1-203ENST00000546433 COL12A1Q99715 3063 aa5.91□□□□□ -1.46
SSH1-203ENST00000546433 TENM4Q6N022 2769 aa5.9□□□□□ -1.46
SSH1-203ENST00000546433 ITPR2Q14571 2701 aa5.89□□□□□ -1.47
SSH1-203ENST00000546433 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
SSH1-203ENST00000546433 NBEAL2Q6ZNJ1 2754 aa5.88□□□□□ -1.47
SSH1-203ENST00000546433 HIVEP1P15822 2718 aa5.86□□□□□ -1.47
SSH1-203ENST00000546433 NSD1Q96L73 2696 aaPredicted RBP5.86□□□□□ -1.47
SSH1-203ENST00000546433 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
SSH1-203ENST00000546433 ASH1LQ9NR48 2969 aaKnown RBP5.84□□□□□ -1.47
SSH1-203ENST00000546433 SMG1Q96Q15 3661 aaKnown RBP5.83□□□□□ -1.48
SSH1-203ENST00000546433 ITPR1Q14643 2758 aa5.82□□□□□ -1.48
SSH1-203ENST00000546433 A6NN06 94 aa5.81□□□□□ -1.48
SSH1-203ENST00000546433 RELNP78509 3460 aa5.8□□□□□ -1.48
SSH1-203ENST00000546433 A8MUU9 505 aa5.79□□□□□ -1.48
SSH1-203ENST00000546433 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
SSH1-203ENST00000546433 CSMD1Q96PZ7 3565 aa5.75□□□□□ -1.49
SSH1-203ENST00000546433 UTP20O75691 2785 aaKnown RBP5.74□□□□□ -1.49
SSH1-203ENST00000546433 CRYBG3Q68DQ2 2970 aa5.74□□□□□ -1.49
SSH1-203ENST00000546433 A8MU10 97 aa5.73□□□□□ -1.49
SSH1-203ENST00000546433 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
SSH1-203ENST00000546433 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
SSH1-203ENST00000546433 SVEP1Q4LDE5 3571 aa5.7□□□□□ -1.5
SSH1-203ENST00000546433 APCP25054 2843 aa5.69□□□□□ -1.5
SSH1-203ENST00000546433 DCHS2Q6V1P9 2916 aa5.68□□□□□ -1.5
SSH1-203ENST00000546433 SPENQ96T58 3664 aaKnown RBP5.67□□□□□ -1.5
SSH1-203ENST00000546433 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
SSH1-203ENST00000546433 CELSR2Q9HCU4 2923 aa5.62□□□□□ -1.51
SSH1-203ENST00000546433 CUBNO60494 3623 aa5.62□□□□□ -1.51
SSH1-203ENST00000546433 TNP1P09430 55 aa5.62□□□□□ -1.51
SSH1-203ENST00000546433 ZANQ9Y493 2812 aa5.62□□□□□ -1.51
SSH1-203ENST00000546433 CELSR1Q9NYQ6 3014 aa5.61□□□□□ -1.51
SSH1-203ENST00000546433 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
SSH1-203ENST00000546433 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
SSH1-203ENST00000546433 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
SSH1-203ENST00000546433 XP32Q5T750 250 aa5.54□□□□□ -1.52
SSH1-203ENST00000546433 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
SSH1-203ENST00000546433 NF1P21359 2839 aa5.52□□□□□ -1.53
SSH1-203ENST00000546433 FBN2P35556 2912 aa5.5□□□□□ -1.53
SSH1-203ENST00000546433 NIPBLQ6KC79 2804 aaeCLIP5.5□□□□□ -1.53
SSH1-203ENST00000546433 BSNQ9UPA5 3926 aa5.45□□□□□ -1.54
SSH1-203ENST00000546433 PDZD2O15018 2839 aa5.44□□□□□ -1.54
SSH1-203ENST00000546433 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
SSH1-203ENST00000546433 TENM3Q9P273 2699 aa5.43□□□□□ -1.54
SSH1-203ENST00000546433 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
SSH1-203ENST00000546433 MXRA5Q9NR99 2828 aa5.43□□□□□ -1.54
SSH1-203ENST00000546433 H0YAA0 97 aa5.41□□□□□ -1.54
SSH1-203ENST00000546433 ALMS1Q8TCU4 4167 aa5.4□□□□□ -1.55
SSH1-203ENST00000546433 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
SSH1-203ENST00000546433 TENM2Q9NT68 2774 aa5.37□□□□□ -1.55
SSH1-203ENST00000546433 ANK3Q12955 4377 aaKnown RBP5.35□□□□□ -1.55
SSH1-203ENST00000546433 P0C880 135 aa5.33□□□□□ -1.56
SSH1-203ENST00000546433 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
SSH1-203ENST00000546433 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
SSH1-203ENST00000546433 PKD1L1Q8TDX9 2849 aa5.27□□□□□ -1.57
SSH1-203ENST00000546433 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
SSH1-203ENST00000546433 OTOGQ6ZRI0 2925 aa5.26□□□□□ -1.57
SSH1-203ENST00000546433 ZFHX3Q15911 3703 aa5.26□□□□□ -1.57
SSH1-203ENST00000546433 TENM1Q9UKZ4 2725 aa5.26□□□□□ -1.57
SSH1-203ENST00000546433 FBN3Q75N90 2809 aa5.23□□□□□ -1.57
SSH1-203ENST00000546433 VWFP04275 2813 aa5.17□□□□□ -1.58
SSH1-203ENST00000546433 NBPF19A0A087WUL8 3843 aa5.16□□□□□ -1.58
SSH1-203ENST00000546433 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.58
SSH1-203ENST00000546433 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
SSH1-203ENST00000546433 FBN1P35555 2871 aaKnown RBP5.13□□□□□ -1.59
SSH1-203ENST00000546433 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
SSH1-203ENST00000546433 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
SSH1-203ENST00000546433 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
SSH1-203ENST00000546433 AKAP9Q99996 3911 aa5.03□□□□□ -1.6
SSH1-203ENST00000546433 TGP01266 2768 aa5.02□□□□□ -1.61
SSH1-203ENST00000546433 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
SSH1-203ENST00000546433 SRRM2Q9UQ35 2752 aaKnown RBP5□□□□□ -1.61
SSH1-203ENST00000546433 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
SSH1-203ENST00000546433 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
SSH1-203ENST00000546433 ZNF469Q96JG9 3925 aaPredicted RBP4.94□□□□□ -1.62
SSH1-203ENST00000546433 TRRAPQ9Y4A5 3859 aa4.89□□□□□ -1.63
SSH1-203ENST00000546433 DNAH1Q9P2D7 4330 aa4.88□□□□□ -1.63
SSH1-203ENST00000546433 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
SSH1-203ENST00000546433 DNAH9Q9NYC9 4486 aa4.82□□□□□ -1.64
SSH1-203ENST00000546433 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
SSH1-203ENST00000546433 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
SSH1-203ENST00000546433 DNAH11Q96DT5 4516 aa4.77□□□□□ -1.65
SSH1-203ENST00000546433 ANK2Q01484 3957 aa4.75□□□□□ -1.65
SSH1-203ENST00000546433 COL7A1Q02388 2944 aa4.7□□□□□ -1.66
SSH1-203ENST00000546433 CSMD3Q7Z407 3707 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms