RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
CIT-217ENST00000545913 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
CIT-217ENST00000545913 H3BS24 57 aa6.85□□□□□ -1.31
CIT-217ENST00000545913 CFAP47Q6ZTR5 3102 aa6.85□□□□□ -1.31
CIT-217ENST00000545913 ATMQ13315 3056 aa6.84□□□□□ -1.31
CIT-217ENST00000545913 PANO1I0J062 215 aa6.83□□□□□ -1.32
CIT-217ENST00000545913 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
CIT-217ENST00000545913 A0A087X002 238 aa6.81□□□□□ -1.32
CIT-217ENST00000545913 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
CIT-217ENST00000545913 NIPBLQ6KC79 2804 aaeCLIP6.78□□□□□ -1.321e-5■□□□□ 11.1
CIT-217ENST00000545913 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
CIT-217ENST00000545913 TNRC18O15417 2968 aaPredicted RBP6.77□□□□□ -1.33
CIT-217ENST00000545913 EYSQ5T1H1 3165 aa6.74□□□□□ -1.33
CIT-217ENST00000545913 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
CIT-217ENST00000545913 DMDP11532 3685 aa6.73□□□□□ -1.33
CIT-217ENST00000545913 DCHS2Q6V1P9 2916 aa6.73□□□□□ -1.33
CIT-217ENST00000545913 DMXL1Q9Y485 3027 aa6.72□□□□□ -1.33
CIT-217ENST00000545913 NF1P21359 2839 aa6.71□□□□□ -1.33
CIT-217ENST00000545913 ZANQ9Y493 2812 aa6.71□□□□□ -1.34
CIT-217ENST00000545913 LAMA5O15230 3695 aa6.68□□□□□ -1.34
CIT-217ENST00000545913 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
CIT-217ENST00000545913 A8MUU9 505 aa6.66□□□□□ -1.34
CIT-217ENST00000545913 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
CIT-217ENST00000545913 ASPMQ8IZT6 3477 aa6.64□□□□□ -1.35
CIT-217ENST00000545913 FBN2P35556 2912 aa6.63□□□□□ -1.35
CIT-217ENST00000545913 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
CIT-217ENST00000545913 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
CIT-217ENST00000545913 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
CIT-217ENST00000545913 TENM4Q6N022 2769 aa6.59□□□□□ -1.35
CIT-217ENST00000545913 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
CIT-217ENST00000545913 HRNRQ86YZ3 2850 aaPredicted RBP6.57□□□□□ -1.36
CIT-217ENST00000545913 A6NN06 94 aa6.55□□□□□ -1.36
CIT-217ENST00000545913 SPENQ96T58 3664 aaKnown RBP6.55□□□□□ -1.36
CIT-217ENST00000545913 LOC400499M0QZD8 3231 aa6.55□□□□□ -1.36
CIT-217ENST00000545913 KRTAP13-2Q52LG2 175 aa6.55□□□□□ -1.36
CIT-217ENST00000545913 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
CIT-217ENST00000545913 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
CIT-217ENST00000545913 A8MU10 97 aa6.53□□□□□ -1.36
CIT-217ENST00000545913 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
CIT-217ENST00000545913 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
CIT-217ENST00000545913 DCHS1Q96JQ0 3298 aa6.51□□□□□ -1.37
CIT-217ENST00000545913 ZFHX3Q15911 3703 aa6.5□□□□□ -1.37
CIT-217ENST00000545913 TNP1P09430 55 aa6.47□□□□□ -1.37
CIT-217ENST00000545913 RELNP78509 3460 aa6.47□□□□□ -1.37
CIT-217ENST00000545913 TGP01266 2768 aa6.44□□□□□ -1.38
CIT-217ENST00000545913 CSMD1Q96PZ7 3565 aa6.43□□□□□ -1.38
CIT-217ENST00000545913 PDZD2O15018 2839 aa6.42□□□□□ -1.38
CIT-217ENST00000545913 KRTAP21-3Q3LHN1 58 aa6.42□□□□□ -1.38
CIT-217ENST00000545913 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
CIT-217ENST00000545913 ZFHX4Q86UP3 3567 aa6.4□□□□□ -1.38
CIT-217ENST00000545913 MXRA5Q9NR99 2828 aa6.38□□□□□ -1.39
CIT-217ENST00000545913 SMG1Q96Q15 3661 aaKnown RBP6.38□□□□□ -1.39
CIT-217ENST00000545913 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
CIT-217ENST00000545913 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
CIT-217ENST00000545913 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
CIT-217ENST00000545913 VWFP04275 2813 aa6.34□□□□□ -1.4
CIT-217ENST00000545913 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
CIT-217ENST00000545913 AKAP9Q99996 3911 aa6.31□□□□□ -1.4
CIT-217ENST00000545913 BSNQ9UPA5 3926 aa6.28□□□□□ -1.4
CIT-217ENST00000545913 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
CIT-217ENST00000545913 XP32Q5T750 250 aa6.25□□□□□ -1.41
CIT-217ENST00000545913 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
CIT-217ENST00000545913 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.41
CIT-217ENST00000545913 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
CIT-217ENST00000545913 H0YAA0 97 aa6.17□□□□□ -1.42
CIT-217ENST00000545913 SVEP1Q4LDE5 3571 aa6.16□□□□□ -1.42
CIT-217ENST00000545913 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
CIT-217ENST00000545913 TENM2Q9NT68 2774 aa6.13□□□□□ -1.43
CIT-217ENST00000545913 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
CIT-217ENST00000545913 P0C880 135 aa6.09□□□□□ -1.44
CIT-217ENST00000545913 MUC3AQ02505 3323 aa6.06□□□□□ -1.44
CIT-217ENST00000545913 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
CIT-217ENST00000545913 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
CIT-217ENST00000545913 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
CIT-217ENST00000545913 CSMD2Q7Z408 3487 aa6.01□□□□□ -1.45
CIT-217ENST00000545913 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
CIT-217ENST00000545913 SRRM2Q9UQ35 2752 aaKnown RBP6□□□□□ -1.45
CIT-217ENST00000545913 MEGF8Q7Z7M0 2845 aa5.92□□□□□ -1.46
CIT-217ENST00000545913 CUBNO60494 3623 aa5.9□□□□□ -1.46
CIT-217ENST00000545913 FBN3Q75N90 2809 aa5.88□□□□□ -1.47
CIT-217ENST00000545913 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
CIT-217ENST00000545913 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
CIT-217ENST00000545913 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
CIT-217ENST00000545913 OTOGQ6ZRI0 2925 aa5.72□□□□□ -1.49
CIT-217ENST00000545913 ZNF469Q96JG9 3925 aaPredicted RBP5.7□□□□□ -1.5
CIT-217ENST00000545913 CMYA5Q8N3K9 4069 aa5.69□□□□□ -1.5
CIT-217ENST00000545913 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
CIT-217ENST00000545913 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
CIT-217ENST00000545913 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
CIT-217ENST00000545913 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CIT-217ENST00000545913 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
CIT-217ENST00000545913 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
CIT-217ENST00000545913 LYSTQ99698 3801 aa5.46□□□□□ -1.54
CIT-217ENST00000545913 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
CIT-217ENST00000545913 DNAH7Q8WXX0 4024 aa5.42□□□□□ -1.54
CIT-217ENST00000545913 ANK3Q12955 4377 aaKnown RBP5.41□□□□□ -1.54
CIT-217ENST00000545913 ANK2Q01484 3957 aa5.4□□□□□ -1.55
CIT-217ENST00000545913 HECTD4Q9Y4D8 3996 aa5.4□□□□□ -1.55
CIT-217ENST00000545913 FRAS1Q86XX4 4008 aa5.34□□□□□ -1.55
CIT-217ENST00000545913 INE1O15225 51 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms