RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 FRAS1Q86XX4 4008 aa9.03□□□□□ -0.96
CNN3-207ENST00000545882 NDUFS5O43920 106 aa9.02□□□□□ -0.97
CNN3-207ENST00000545882 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
CNN3-207ENST00000545882 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
CNN3-207ENST00000545882 LIMD2Q9BT23 127 aa9□□□□□ -0.97
CNN3-207ENST00000545882 A8MU10 97 aa8.99□□□□□ -0.97
CNN3-207ENST00000545882 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
CNN3-207ENST00000545882 C1orf134Q5TEV5 83 aa8.97□□□□□ -0.97
CNN3-207ENST00000545882 PRR15LQ9BU68 103 aa8.97□□□□□ -0.97
CNN3-207ENST00000545882 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
CNN3-207ENST00000545882 Q5W150 140 aa8.95□□□□□ -0.98
CNN3-207ENST00000545882 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
CNN3-207ENST00000545882 DNAH6Q9C0G6 4158 aa8.94□□□□□ -0.98
CNN3-207ENST00000545882 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
CNN3-207ENST00000545882 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
CNN3-207ENST00000545882 HRES1P13985 223 aa8.92□□□□□ -0.98
CNN3-207ENST00000545882 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
CNN3-207ENST00000545882 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
CNN3-207ENST00000545882 LY6G6CO95867 125 aa8.9□□□□□ -0.98
CNN3-207ENST00000545882 Q75L30 129 aa8.9□□□□□ -0.98
CNN3-207ENST00000545882 TGP01266 2768 aa8.9□□□□□ -0.98
CNN3-207ENST00000545882 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.99
CNN3-207ENST00000545882 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
CNN3-207ENST00000545882 LINC01558Q9Y6Z2 57 aa8.88□□□□□ -0.99
CNN3-207ENST00000545882 DNAH5Q8TE73 4624 aa8.87□□□□□ -0.99
CNN3-207ENST00000545882 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
CNN3-207ENST00000545882 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
CNN3-207ENST00000545882 LCA10Q71F78 164 aa8.86□□□□□ -0.99
CNN3-207ENST00000545882 KRTAP10-2P60368 255 aa8.85□□□□□ -0.99
CNN3-207ENST00000545882 C8orf87E5RJ46 101 aa8.82□□□□□ -1
CNN3-207ENST00000545882 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
CNN3-207ENST00000545882 PMAIP1Q13794 54 aa8.8□□□□□ -1
CNN3-207ENST00000545882 A6NED7 52 aa8.8□□□□□ -1
CNN3-207ENST00000545882 Q6ZSA8 131 aa8.78□□□□□ -1
CNN3-207ENST00000545882 HYDINQ4G0P3 5121 aa8.78□□□□□ -1
CNN3-207ENST00000545882 FAT2Q9NYQ8 4349 aa8.78□□□□□ -1
CNN3-207ENST00000545882 PKD1P98161 4303 aa8.77□□□□□ -1
CNN3-207ENST00000545882 LINC00313P59037 77 aa8.77□□□□□ -1.01
CNN3-207ENST00000545882 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
CNN3-207ENST00000545882 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
CNN3-207ENST00000545882 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
CNN3-207ENST00000545882 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
CNN3-207ENST00000545882 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
CNN3-207ENST00000545882 SPINK7P58062 85 aa8.72□□□□□ -1.01
CNN3-207ENST00000545882 ATP11AUNQ6ZP68 121 aa8.72□□□□□ -1.01
CNN3-207ENST00000545882 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
CNN3-207ENST00000545882 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
CNN3-207ENST00000545882 ACYP2P14621 99 aa8.71□□□□□ -1.02
CNN3-207ENST00000545882 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.02
CNN3-207ENST00000545882 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
CNN3-207ENST00000545882 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.02
CNN3-207ENST00000545882 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
CNN3-207ENST00000545882 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
CNN3-207ENST00000545882 A6NN06 94 aa8.66□□□□□ -1.02
CNN3-207ENST00000545882 SEC61GP60059 68 aa8.61□□□□□ -1.03
CNN3-207ENST00000545882 KTN1-AS1Q86SY8 53 aa8.59□□□□□ -1.03
CNN3-207ENST00000545882 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
CNN3-207ENST00000545882 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
CNN3-207ENST00000545882 PLA2G1BP04054 148 aaKnown RBP8.54□□□□□ -1.04
CNN3-207ENST00000545882 IGKV2D-30A0A075B6S6 120 aa8.54□□□□□ -1.04
CNN3-207ENST00000545882 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.04
CNN3-207ENST00000545882 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
CNN3-207ENST00000545882 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
CNN3-207ENST00000545882 SPINK1P00995 79 aa8.5□□□□□ -1.05
CNN3-207ENST00000545882 A0A1B0GU69 56 aa8.49□□□□□ -1.05
CNN3-207ENST00000545882 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
CNN3-207ENST00000545882 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
CNN3-207ENST00000545882 RBM12B-AS1Q9P1G2 102 aa8.42□□□□□ -1.06
CNN3-207ENST00000545882 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
CNN3-207ENST00000545882 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
CNN3-207ENST00000545882 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
CNN3-207ENST00000545882 RPS29P62273 56 aaKnown RBP8.39□□□□□ -1.07
CNN3-207ENST00000545882 Q8N1X5 172 aa8.37□□□□□ -1.07
CNN3-207ENST00000545882 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
CNN3-207ENST00000545882 UQCR11O14957 56 aa8.34□□□□□ -1.07
CNN3-207ENST00000545882 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
CNN3-207ENST00000545882 KRTAP10-4P60372 401 aaPredicted RBP8.33□□□□□ -1.08
CNN3-207ENST00000545882 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
CNN3-207ENST00000545882 RYR2Q92736 4967 aa8.29□□□□□ -1.08
CNN3-207ENST00000545882 PKHD1L1Q86WI1 4243 aa8.29□□□□□ -1.08
CNN3-207ENST00000545882 FAT1Q14517 4588 aa8.29□□□□□ -1.08
CNN3-207ENST00000545882 A8MUU9 505 aa8.29□□□□□ -1.08
CNN3-207ENST00000545882 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
CNN3-207ENST00000545882 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
CNN3-207ENST00000545882 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
CNN3-207ENST00000545882 PRAC1Q96KF2 57 aa8.25□□□□□ -1.09
CNN3-207ENST00000545882 KRTAP3-1Q9BYR8 98 aa8.24□□□□□ -1.09
CNN3-207ENST00000545882 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
CNN3-207ENST00000545882 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
CNN3-207ENST00000545882 KMT2CQ8NEZ4 4911 aaKnown RBP8.2□□□□□ -1.1
CNN3-207ENST00000545882 H0YAA0 97 aa8.11□□□□□ -1.11
CNN3-207ENST00000545882 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
CNN3-207ENST00000545882 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
CNN3-207ENST00000545882 A0A1B0GU33 70 aa8.03□□□□□ -1.12
CNN3-207ENST00000545882 H1FX-AS1Q4G0G2 97 aa8.02□□□□□ -1.13
CNN3-207ENST00000545882 HSPG2P98160 4391 aa8.01□□□□□ -1.13
CNN3-207ENST00000545882 TNXBP22105 4242 aa8□□□□□ -1.13
CNN3-207ENST00000545882 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
CNN3-207ENST00000545882 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
CNN3-207ENST00000545882 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms