RNA–Protein interactions for RNA: ENST00000544974.6

LRRC49-204, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2 BASIC

Gene LRRC49, Length 6,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-204ENST00000544974 NBEAQ8NFP9 2946 aa3.23□□□□□ -1.89
LRRC49-204ENST00000544974 DMDP11532 3685 aa3.22□□□□□ -1.89
LRRC49-204ENST00000544974 BOD1L1Q8NFC6 3051 aa3.2□□□□□ -1.9
LRRC49-204ENST00000544974 CUBNO60494 3623 aa3.2□□□□□ -1.9
LRRC49-204ENST00000544974 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
LRRC49-204ENST00000544974 ZFHX4Q86UP3 3567 aa3.2□□□□□ -1.9
LRRC49-204ENST00000544974 ZNF292O60281 2723 aa3.2□□□□□ -1.9
LRRC49-204ENST00000544974 AKAP13Q12802 2813 aa3.19□□□□□ -1.9
LRRC49-204ENST00000544974 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
LRRC49-204ENST00000544974 ASH1LQ9NR48 2969 aaKnown RBP3.18□□□□□ -1.9
LRRC49-204ENST00000544974 DMXL1Q9Y485 3027 aa3.17□□□□□ -1.9
LRRC49-204ENST00000544974 ADGRG4Q8IZF6 3080 aa3.17□□□□□ -1.9
LRRC49-204ENST00000544974 COL12A1Q99715 3063 aa3.17□□□□□ -1.9
LRRC49-204ENST00000544974 CFAP46Q8IYW2 2715 aa3.16□□□□□ -1.9
LRRC49-204ENST00000544974 DMXL2Q8TDJ6 3036 aa3.15□□□□□ -1.9
LRRC49-204ENST00000544974 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
LRRC49-204ENST00000544974 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
LRRC49-204ENST00000544974 KRTAP13-1Q8IUC0 172 aa3.14□□□□□ -1.91
LRRC49-204ENST00000544974 SMG1Q96Q15 3661 aaKnown RBP3.13□□□□□ -1.91
LRRC49-204ENST00000544974 HECTD1Q9ULT8 2610 aa3.13□□□□□ -1.91
LRRC49-204ENST00000544974 LRBAP50851 2863 aa3.13□□□□□ -1.91
LRRC49-204ENST00000544974 STAB2Q8WWQ8 2551 aa3.11□□□□□ -1.91
LRRC49-204ENST00000544974 TPRXLQ17RH7 258 aa3.11□□□□□ -1.91
LRRC49-204ENST00000544974 NBEAL1Q6ZS30 2694 aa3.1□□□□□ -1.91
LRRC49-204ENST00000544974 STAB1Q9NY15 2570 aa3.1□□□□□ -1.91
LRRC49-204ENST00000544974 SPENQ96T58 3664 aaKnown RBP3.1□□□□□ -1.91
LRRC49-204ENST00000544974 CHD6Q8TD26 2715 aa3.09□□□□□ -1.91
LRRC49-204ENST00000544974 MAP1AP78559 2803 aaPredicted RBP3.09□□□□□ -1.92
LRRC49-204ENST00000544974 ZZEF1O43149 2961 aa3.08□□□□□ -1.92
LRRC49-204ENST00000544974 ATRQ13535 2644 aa3.08□□□□□ -1.92
LRRC49-204ENST00000544974 TACC2O95359 2948 aa3.07□□□□□ -1.92
LRRC49-204ENST00000544974 ITPR3Q14573 2671 aa3.07□□□□□ -1.92
LRRC49-204ENST00000544974 FLNAP21333 2647 aaKnown RBP3.07□□□□□ -1.92
LRRC49-204ENST00000544974 SVEP1Q4LDE5 3571 aa3.07□□□□□ -1.92
LRRC49-204ENST00000544974 NBEAL2Q6ZNJ1 2754 aa3.05□□□□□ -1.92
LRRC49-204ENST00000544974 KRTAP10-7P60409 375 aaPredicted RBP3.05□□□□□ -1.92
LRRC49-204ENST00000544974 NOTCH1P46531 2555 aa3.04□□□□□ -1.92
LRRC49-204ENST00000544974 CENPEQ02224 2701 aa3.04□□□□□ -1.92
LRRC49-204ENST00000544974 KRTAP1-4P0C5Y4 121 aa3.03□□□□□ -1.92
LRRC49-204ENST00000544974 KRTAP13-3Q3SY46 172 aa3.03□□□□□ -1.93
LRRC49-204ENST00000544974 MAST4O15021 2626 aa3.02□□□□□ -1.93
LRRC49-204ENST00000544974 ITPR1Q14643 2758 aa3.02□□□□□ -1.93
LRRC49-204ENST00000544974 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
LRRC49-204ENST00000544974 HELZ2Q9BYK8 2649 aaKnown RBP3.01□□□□□ -1.93
LRRC49-204ENST00000544974 UNC79Q9P2D8 2635 aa3□□□□□ -1.93
LRRC49-204ENST00000544974 FLNBO75369 2602 aaKnown RBP3□□□□□ -1.93
LRRC49-204ENST00000544974 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
LRRC49-204ENST00000544974 IGSF10Q6WRI0 2623 aa2.98□□□□□ -1.93
LRRC49-204ENST00000544974 GCN1Q92616 2671 aaKnown RBP2.97□□□□□ -1.93
LRRC49-204ENST00000544974 TEX15Q9BXT5 2789 aa2.97□□□□□ -1.93
LRRC49-204ENST00000544974 NSD1Q96L73 2696 aaPredicted RBP2.96□□□□□ -1.94
LRRC49-204ENST00000544974 APCP25054 2843 aa2.96□□□□□ -1.94
LRRC49-204ENST00000544974 UBR5O95071 2799 aaPredicted RBP2.94□□□□□ -1.94
LRRC49-204ENST00000544974 FLNCQ14315 2725 aa2.94□□□□□ -1.94
LRRC49-204ENST00000544974 CRYBG3Q68DQ2 2970 aa2.93□□□□□ -1.94
LRRC49-204ENST00000544974 COL6A5A8TX70 2615 aa2.93□□□□□ -1.94
LRRC49-204ENST00000544974 UTP20O75691 2785 aaKnown RBP2.93□□□□□ -1.94
LRRC49-204ENST00000544974 BAHCC1Q9P281 2608 aa2.92□□□□□ -1.94
LRRC49-204ENST00000544974 CELSR1Q9NYQ6 3014 aa2.91□□□□□ -1.94
LRRC49-204ENST00000544974 CSMD2Q7Z408 3487 aa2.91□□□□□ -1.94
LRRC49-204ENST00000544974 NBPF19A0A087WUL8 3843 aa2.88□□□□□ -1.95
LRRC49-204ENST00000544974 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
LRRC49-204ENST00000544974 SETXQ7Z333 2677 aaKnown RBP2.86□□□□□ -1.95
LRRC49-204ENST00000544974 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
LRRC49-204ENST00000544974 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
LRRC49-204ENST00000544974 HIVEP1P15822 2718 aa2.85□□□□□ -1.95
LRRC49-204ENST00000544974 TEP1Q99973 2627 aaKnown RBP2.85□□□□□ -1.95
LRRC49-204ENST00000544974 NIPBLQ6KC79 2804 aaeCLIP2.81□□□□□ -1.96
LRRC49-204ENST00000544974 HRNRQ86YZ3 2850 aaPredicted RBP2.81□□□□□ -1.96
LRRC49-204ENST00000544974 DCHS2Q6V1P9 2916 aa2.8□□□□□ -1.96
LRRC49-204ENST00000544974 CELSR2Q9HCU4 2923 aa2.8□□□□□ -1.96
LRRC49-204ENST00000544974 CSMD3Q7Z407 3707 aa2.8□□□□□ -1.96
LRRC49-204ENST00000544974 VPS13CQ709C8 3753 aa2.78□□□□□ -1.96
LRRC49-204ENST00000544974 ITPR2Q14571 2701 aa2.78□□□□□ -1.97
LRRC49-204ENST00000544974 LORP23490 312 aaPredicted RBP2.77□□□□□ -1.97
LRRC49-204ENST00000544974 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
LRRC49-204ENST00000544974 TENM4Q6N022 2769 aa2.76□□□□□ -1.97
LRRC49-204ENST00000544974 NF1P21359 2839 aa2.75□□□□□ -1.97
LRRC49-204ENST00000544974 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
LRRC49-204ENST00000544974 ZANQ9Y493 2812 aa2.75□□□□□ -1.97
LRRC49-204ENST00000544974 FBN2P35556 2912 aa2.74□□□□□ -1.97
LRRC49-204ENST00000544974 KRTAP3-1Q9BYR8 98 aa2.71□□□□□ -1.98
LRRC49-204ENST00000544974 TGP01266 2768 aa2.71□□□□□ -1.98
LRRC49-204ENST00000544974 KRTAP10-4P60372 401 aaPredicted RBP2.7□□□□□ -1.98
LRRC49-204ENST00000544974 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
LRRC49-204ENST00000544974 MXRA5Q9NR99 2828 aa2.69□□□□□ -1.98
LRRC49-204ENST00000544974 PDZD2O15018 2839 aa2.68□□□□□ -1.98
LRRC49-204ENST00000544974 ZNF469Q96JG9 3925 aaPredicted RBP2.65□□□□□ -1.99
LRRC49-204ENST00000544974 AKAP9Q99996 3911 aa2.61□□□□□ -1.99
LRRC49-204ENST00000544974 OTOGQ6ZRI0 2925 aa2.61□□□□□ -1.99
LRRC49-204ENST00000544974 COL7A1Q02388 2944 aa2.61□□□□□ -1.99
LRRC49-204ENST00000544974 TENM3Q9P273 2699 aa2.61□□□□□ -1.99
LRRC49-204ENST00000544974 FBN1P35555 2871 aaKnown RBP2.6□□□□□ -1.99
LRRC49-204ENST00000544974 TENM2Q9NT68 2774 aa2.59□□□□□ -2
LRRC49-204ENST00000544974 TENM1Q9UKZ4 2725 aa2.58□□□□□ -2
LRRC49-204ENST00000544974 ANK3Q12955 4377 aaKnown RBP2.58□□□□□ -2
LRRC49-204ENST00000544974 KRTAP3-2Q9BYR7 98 aa2.55□□□□□ -2
LRRC49-204ENST00000544974 KRTAP4-5Q9BYR2 181 aa2.54□□□□□ -2
LRRC49-204ENST00000544974 TRRAPQ9Y4A5 3859 aa2.54□□□□□ -2
LRRC49-204ENST00000544974 VWFP04275 2813 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms