RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
COPS7A-218ENST00000543939 SPAG11AQ6PDA7 123 aa11.35□□□□□ -0.59
COPS7A-218ENST00000543939 KRTAP17-1Q9BYP8 105 aa11.35□□□□□ -0.59
COPS7A-218ENST00000543939 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
COPS7A-218ENST00000543939 C8orf17Q9NRJ1 99 aa11.34□□□□□ -0.59
COPS7A-218ENST00000543939 RPS29P62273 56 aaKnown RBP11.33□□□□□ -0.6
COPS7A-218ENST00000543939 hDV103S1A0JD37 113 aa11.3□□□□□ -0.6
COPS7A-218ENST00000543939 EPPK1P58107 5090 aaKnown RBP11.3□□□□□ -0.6
COPS7A-218ENST00000543939 KIAA1109Q2LD37 5005 aa11.28□□□□□ -0.6
COPS7A-218ENST00000543939 NOTCH2NLQ7Z3S9 236 aa11.28□□□□□ -0.6
COPS7A-218ENST00000543939 Q8N1X5 172 aa11.26□□□□□ -0.61
COPS7A-218ENST00000543939 C20orf197Q8N268 126 aa11.26□□□□□ -0.61
COPS7A-218ENST00000543939 CYSTM1Q9H1C7 97 aa11.23□□□□□ -0.61
COPS7A-218ENST00000543939 C8orf87E5RJ46 101 aa11.22□□□□□ -0.61
COPS7A-218ENST00000543939 TMEM254Q8TBM7 123 aa11.21□□□□□ -0.61
COPS7A-218ENST00000543939 KRTAP10-8P60410 259 aa11.21□□□□□ -0.62
COPS7A-218ENST00000543939 MRPL34Q9BQ48 92 aaKnown RBP11.2□□□□□ -0.62
COPS7A-218ENST00000543939 KLKP1Q107X0 134 aa11.19□□□□□ -0.62
COPS7A-218ENST00000543939 LINC00313P59037 77 aa11.17□□□□□ -0.62
COPS7A-218ENST00000543939 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
COPS7A-218ENST00000543939 SNURFQ9Y675 71 aa11.17□□□□□ -0.62
COPS7A-218ENST00000543939 A0A0U1RQV1 116 aa11.15□□□□□ -0.62
COPS7A-218ENST00000543939 TNXBP22105 4242 aa11.13□□□□□ -0.63
COPS7A-218ENST00000543939 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
COPS7A-218ENST00000543939 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
COPS7A-218ENST00000543939 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-218ENST00000543939 NDUFS5O43920 106 aa11.09□□□□□ -0.63
COPS7A-218ENST00000543939 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
COPS7A-218ENST00000543939 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.64
COPS7A-218ENST00000543939 MP68P56378 58 aa11.07□□□□□ -0.64
COPS7A-218ENST00000543939 H0Y9P7 68 aa11.06□□□□□ -0.64
COPS7A-218ENST00000543939 H7BZZ5 65 aa11.06□□□□□ -0.64
COPS7A-218ENST00000543939 ZCCHC13Q8WW36 166 aaKnown RBP11.06□□□□□ -0.64
COPS7A-218ENST00000543939 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
COPS7A-218ENST00000543939 NDUFC1O43677 76 aa11.04□□□□□ -0.64
COPS7A-218ENST00000543939 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-218ENST00000543939 MT1HL1P0DM35 61 aa11.03□□□□□ -0.64
COPS7A-218ENST00000543939 H3BPC8 53 aa11.02□□□□□ -0.65
COPS7A-218ENST00000543939 TMEM258P61165 79 aa11.02□□□□□ -0.65
COPS7A-218ENST00000543939 RETNLBQ9BQ08 111 aa11.02□□□□□ -0.65
COPS7A-218ENST00000543939 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
COPS7A-218ENST00000543939 KRTAP4-5Q9BYR2 181 aa11□□□□□ -0.65
COPS7A-218ENST00000543939 C1orf64Q8NEQ6 169 aa10.96□□□□□ -0.65
COPS7A-218ENST00000543939 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
COPS7A-218ENST00000543939 Q5W150 140 aa10.95□□□□□ -0.66
COPS7A-218ENST00000543939 OXTP01178 125 aa10.95□□□□□ -0.66
COPS7A-218ENST00000543939 DMBT1Q9UGM3 2413 aaPredicted RBP10.92□□□□□ -0.66
COPS7A-218ENST00000543939 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
COPS7A-218ENST00000543939 FAM236DA0A1B0GTK5 79 aa10.89□□□□□ -0.67
COPS7A-218ENST00000543939 C9orf92A6NGG3 77 aa10.89□□□□□ -0.67
COPS7A-218ENST00000543939 FAM236CP0DP71 79 aa10.89□□□□□ -0.67
COPS7A-218ENST00000543939 FP248Q71RG6 208 aaPredicted RBP10.88□□□□□ -0.67
COPS7A-218ENST00000543939 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
COPS7A-218ENST00000543939 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
COPS7A-218ENST00000543939 C20orf166-AS1Q96NR2 134 aa10.83□□□□□ -0.68
COPS7A-218ENST00000543939 A8MUU9 505 aa10.82□□□□□ -0.68
COPS7A-218ENST00000543939 ATP5EP56381 51 aaPredicted RBP10.82□□□□□ -0.68
COPS7A-218ENST00000543939 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
COPS7A-218ENST00000543939 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
COPS7A-218ENST00000543939 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
COPS7A-218ENST00000543939 HERC2O95714 4834 aa10.76□□□□□ -0.69
COPS7A-218ENST00000543939 SPANXA2-OT1Q8N9U9 137 aa10.75□□□□□ -0.69
COPS7A-218ENST00000543939 IGKV2-30P06310 120 aa10.74□□□□□ -0.69
COPS7A-218ENST00000543939 ABCA13Q86UQ4 5058 aa10.72□□□□□ -0.69
COPS7A-218ENST00000543939 RPS28P62857 69 aaKnown RBP10.72□□□□□ -0.69
COPS7A-218ENST00000543939 Q75L30 129 aa10.71□□□□□ -0.69
COPS7A-218ENST00000543939 PRR4Q16378 134 aa10.69□□□□□ -0.7
COPS7A-218ENST00000543939 SERP1Q9Y6X1 66 aa10.68□□□□□ -0.7
COPS7A-218ENST00000543939 IGKV2D-30A0A075B6S6 120 aa10.64□□□□□ -0.71
COPS7A-218ENST00000543939 XP32Q5T750 250 aa10.62□□□□□ -0.71
COPS7A-218ENST00000543939 J3QL48 77 aa10.61□□□□□ -0.71
COPS7A-218ENST00000543939 HRES1P13985 223 aa10.59□□□□□ -0.71
COPS7A-218ENST00000543939 C7orf65Q6ZTY9 151 aa10.59□□□□□ -0.71
COPS7A-218ENST00000543939 RPL37P61927 97 aaKnown RBP10.58□□□□□ -0.72
COPS7A-218ENST00000543939 TPRXLQ17RH7 258 aa10.56□□□□□ -0.72
COPS7A-218ENST00000543939 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
COPS7A-218ENST00000543939 SPINK7P58062 85 aa10.48□□□□□ -0.73
COPS7A-218ENST00000543939 DMAC1Q96GE9 116 aa10.45□□□□□ -0.74
COPS7A-218ENST00000543939 COA5Q86WW8 74 aa10.43□□□□□ -0.74
COPS7A-218ENST00000543939 SMIM26A0A096LP01 95 aa10.41□□□□□ -0.74
COPS7A-218ENST00000543939 ACYP2P14621 99 aa10.39□□□□□ -0.75
COPS7A-218ENST00000543939 C4orf26Q17RF5 130 aa10.37□□□□□ -0.75
COPS7A-218ENST00000543939 LPAP08519 4548 aa10.33□□□□□ -0.76
COPS7A-218ENST00000543939 PCLOQ9Y6V0 5065 aa10.32□□□□□ -0.76
COPS7A-218ENST00000543939 LRP2P98164 4655 aa10.3□□□□□ -0.76
COPS7A-218ENST00000543939 A8MUN3 132 aa10.3□□□□□ -0.76
COPS7A-218ENST00000543939 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
COPS7A-218ENST00000543939 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
COPS7A-218ENST00000543939 MPLKIPQ8TAP9 179 aa10.23□□□□□ -0.77
COPS7A-218ENST00000543939 CHKB-CPT1BH3BT56 60 aa10.21□□□□□ -0.77
COPS7A-218ENST00000543939 Q1T7F1 81 aa10.2□□□□□ -0.78
COPS7A-218ENST00000543939 SEC61BP60468 96 aaKnown RBP10.19□□□□□ -0.78
COPS7A-218ENST00000543939 V9GYY9 64 aa10.13□□□□□ -0.79
COPS7A-218ENST00000543939 LINC01558Q9Y6Z2 57 aa10.06□□□□□ -0.8
COPS7A-218ENST00000543939 HERC1Q15751 4861 aa10.05□□□□□ -0.8
COPS7A-218ENST00000543939 MUC17Q685J3 4493 aa10.02□□□□□ -0.81
COPS7A-218ENST00000543939 KRTAP4-1Q9BYQ7 146 aa10.01□□□□□ -0.81
COPS7A-218ENST00000543939 HMCN2Q8NDA2 5059 aa10□□□□□ -0.81
COPS7A-218ENST00000543939 PSPHP1O15172 72 aa10□□□□□ -0.81
COPS7A-218ENST00000543939 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms