RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 NDUFS5O43920 106 aa10.45□□□□□ -0.74
PTPN6-222ENST00000543744 SPINK6Q6UWN8 80 aa10.45□□□□□ -0.74
PTPN6-222ENST00000543744 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
PTPN6-222ENST00000543744 MRPL34Q9BQ48 92 aaKnown RBP10.45□□□□□ -0.74
PTPN6-222ENST00000543744 A0A087X002 238 aa10.43□□□□□ -0.74
PTPN6-222ENST00000543744 NOTCH2NLQ7Z3S9 236 aa10.43□□□□□ -0.74
PTPN6-222ENST00000543744 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
PTPN6-222ENST00000543744 PKD1P98161 4303 aa10.41□□□□□ -0.74
PTPN6-222ENST00000543744 HYDINQ4G0P3 5121 aa10.39□□□□□ -0.75
PTPN6-222ENST00000543744 FAT2Q9NYQ8 4349 aa10.38□□□□□ -0.75
PTPN6-222ENST00000543744 KRTAP13-2Q52LG2 175 aa10.36□□□□□ -0.75
PTPN6-222ENST00000543744 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
PTPN6-222ENST00000543744 LRP1BQ9NZR2 4599 aa10.33□□□□□ -0.76
PTPN6-222ENST00000543744 PCOTHQ58A44 107 aa10.33□□□□□ -0.76
PTPN6-222ENST00000543744 IGLV7-46A0A075B6I9 117 aa10.32□□□□□ -0.76
PTPN6-222ENST00000543744 Q1T7F1 81 aa10.31□□□□□ -0.76
PTPN6-222ENST00000543744 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
PTPN6-222ENST00000543744 KRTAP1-4P0C5Y4 121 aa10.28□□□□□ -0.76
PTPN6-222ENST00000543744 C1orf195Q5TG92 126 aa10.26□□□□□ -0.77
PTPN6-222ENST00000543744 LINC00313P59037 77 aa10.24□□□□□ -0.77
PTPN6-222ENST00000543744 Q5W150 140 aa10.24□□□□□ -0.77
PTPN6-222ENST00000543744 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
PTPN6-222ENST00000543744 PLA2G1BP04054 148 aaKnown RBP10.22□□□□□ -0.77
PTPN6-222ENST00000543744 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
PTPN6-222ENST00000543744 VPS13BQ7Z7G8 4022 aa10.21□□□□□ -0.77
PTPN6-222ENST00000543744 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.77
PTPN6-222ENST00000543744 PRO0628Q9UI54 55 aa10.21□□□□□ -0.77
PTPN6-222ENST00000543744 V9GYY9 64 aa10.21□□□□□ -0.77
PTPN6-222ENST00000543744 COA5Q86WW8 74 aa10.21□□□□□ -0.78
PTPN6-222ENST00000543744 BRK1Q8WUW1 75 aa10.19□□□□□ -0.78
PTPN6-222ENST00000543744 PSPHP1O15172 72 aa10.17□□□□□ -0.78
PTPN6-222ENST00000543744 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
PTPN6-222ENST00000543744 Q8N9P0 234 aaPredicted RBP10.17□□□□□ -0.78
PTPN6-222ENST00000543744 TYMSOSQ8TAI1 123 aa10.17□□□□□ -0.78
PTPN6-222ENST00000543744 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
PTPN6-222ENST00000543744 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
PTPN6-222ENST00000543744 SPINK1P00995 79 aa10.12□□□□□ -0.79
PTPN6-222ENST00000543744 A8MUN3 132 aa10.11□□□□□ -0.79
PTPN6-222ENST00000543744 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
PTPN6-222ENST00000543744 KRTAP16-1A8MUX0 517 aa10.09□□□□□ -0.79
PTPN6-222ENST00000543744 HRES1P13985 223 aa10.08□□□□□ -0.8
PTPN6-222ENST00000543744 RETNLBQ9BQ08 111 aa10.07□□□□□ -0.8
PTPN6-222ENST00000543744 SMR3BP02814 79 aaPredicted RBP10.05□□□□□ -0.8
PTPN6-222ENST00000543744 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
PTPN6-222ENST00000543744 Q5VV11 94 aa10.04□□□□□ -0.8
PTPN6-222ENST00000543744 LINC00304Q8N9R0 145 aa10.03□□□□□ -0.8
PTPN6-222ENST00000543744 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
PTPN6-222ENST00000543744 A0A1B0GVY2 172 aa10.02□□□□□ -0.81
PTPN6-222ENST00000543744 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
PTPN6-222ENST00000543744 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
PTPN6-222ENST00000543744 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
PTPN6-222ENST00000543744 ACYP2P14621 99 aa9.98□□□□□ -0.81
PTPN6-222ENST00000543744 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
PTPN6-222ENST00000543744 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.81
PTPN6-222ENST00000543744 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
PTPN6-222ENST00000543744 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
PTPN6-222ENST00000543744 Q75L30 129 aa9.92□□□□□ -0.82
PTPN6-222ENST00000543744 IGKV2D-30A0A075B6S6 120 aa9.91□□□□□ -0.82
PTPN6-222ENST00000543744 KRTAP10-4P60372 401 aaPredicted RBP9.9□□□□□ -0.82
PTPN6-222ENST00000543744 APOBP04114 4563 aaKnown RBP9.86□□□□□ -0.83
PTPN6-222ENST00000543744 A6NED7 52 aa9.83□□□□□ -0.84
PTPN6-222ENST00000543744 FAT1Q14517 4588 aa9.83□□□□□ -0.84
PTPN6-222ENST00000543744 RYR2Q92736 4967 aa9.82□□□□□ -0.84
PTPN6-222ENST00000543744 A8MU10 97 aa9.8□□□□□ -0.84
PTPN6-222ENST00000543744 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.85
PTPN6-222ENST00000543744 PKHD1L1Q86WI1 4243 aa9.77□□□□□ -0.85
PTPN6-222ENST00000543744 C9orf92A6NGG3 77 aa9.76□□□□□ -0.85
PTPN6-222ENST00000543744 LCA10Q71F78 164 aa9.75□□□□□ -0.85
PTPN6-222ENST00000543744 KMT2CQ8NEZ4 4911 aaKnown RBP9.72□□□□□ -0.85
PTPN6-222ENST00000543744 A8MUU9 505 aa9.72□□□□□ -0.85
PTPN6-222ENST00000543744 C20orf166-AS1Q96NR2 134 aa9.72□□□□□ -0.85
PTPN6-222ENST00000543744 CDC42SE1Q9NRR8 79 aa9.71□□□□□ -0.86
PTPN6-222ENST00000543744 SPINK7P58062 85 aa9.7□□□□□ -0.86
PTPN6-222ENST00000543744 ATP11AUNQ6ZP68 121 aa9.66□□□□□ -0.86
PTPN6-222ENST00000543744 SPTSSBQ8NFR3 76 aa9.65□□□□□ -0.86
PTPN6-222ENST00000543744 A0A1B0GU69 56 aa9.65□□□□□ -0.87
PTPN6-222ENST00000543744 Q8N1X5 172 aa9.65□□□□□ -0.87
PTPN6-222ENST00000543744 PMAIP1Q13794 54 aa9.63□□□□□ -0.87
PTPN6-222ENST00000543744 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
PTPN6-222ENST00000543744 Q5VSD8 79 aa9.56□□□□□ -0.88
PTPN6-222ENST00000543744 KRTAP10-8P60410 259 aa9.55□□□□□ -0.88
PTPN6-222ENST00000543744 HSPG2P98160 4391 aa9.49□□□□□ -0.89
PTPN6-222ENST00000543744 TNXBP22105 4242 aa9.48□□□□□ -0.89
PTPN6-222ENST00000543744 LRP1Q07954 4544 aaKnown RBP9.47□□□□□ -0.89
PTPN6-222ENST00000543744 A6NN06 94 aa9.46□□□□□ -0.89
PTPN6-222ENST00000543744 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.9
PTPN6-222ENST00000543744 FAT3Q8TDW7 4589 aa9.45□□□□□ -0.9
PTPN6-222ENST00000543744 UQCR11O14957 56 aa9.44□□□□□ -0.9
PTPN6-222ENST00000543744 RYR3Q15413 4870 aa9.43□□□□□ -0.9
PTPN6-222ENST00000543744 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
PTPN6-222ENST00000543744 SEC61GP60059 68 aa9.42□□□□□ -0.9
PTPN6-222ENST00000543744 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
PTPN6-222ENST00000543744 RYR1P21817 5038 aa9.38□□□□□ -0.91
PTPN6-222ENST00000543744 KTN1-AS1Q86SY8 53 aa9.38□□□□□ -0.91
PTPN6-222ENST00000543744 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
PTPN6-222ENST00000543744 KRTAP17-1Q9BYP8 105 aa9.36□□□□□ -0.91
PTPN6-222ENST00000543744 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
PTPN6-222ENST00000543744 DMBT1Q9UGM3 2413 aaPredicted RBP9.33□□□□□ -0.92
PTPN6-222ENST00000543744 XP32Q5T750 250 aa9.3□□□□□ -0.92
PTPN6-222ENST00000543744 MT1HL1P0DM35 61 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms