RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
GNE-206ENST00000543356 NDUFS5O43920 106 aa5.57□□□□□ -1.52
GNE-206ENST00000543356 J3QL48 77 aa5.57□□□□□ -1.52
GNE-206ENST00000543356 LCA10Q71F78 164 aa5.57□□□□□ -1.52
GNE-206ENST00000543356 MOBPQ13875 183 aa5.56□□□□□ -1.52
GNE-206ENST00000543356 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
GNE-206ENST00000543356 IGKV4-1P06312 121 aa5.55□□□□□ -1.52
GNE-206ENST00000543356 PRR4Q16378 134 aa5.55□□□□□ -1.52
GNE-206ENST00000543356 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
GNE-206ENST00000543356 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
GNE-206ENST00000543356 APOBP04114 4563 aaKnown RBP5.54□□□□□ -1.52
GNE-206ENST00000543356 A0A087WSZ3 146 aa5.54□□□□□ -1.52
GNE-206ENST00000543356 SPINK6Q6UWN8 80 aa5.53□□□□□ -1.52
GNE-206ENST00000543356 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
GNE-206ENST00000543356 C7orf65Q6ZTY9 151 aa5.53□□□□□ -1.52
GNE-206ENST00000543356 RYR3Q15413 4870 aa5.52□□□□□ -1.53
GNE-206ENST00000543356 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
GNE-206ENST00000543356 KRTAP1-4P0C5Y4 121 aa5.52□□□□□ -1.53
GNE-206ENST00000543356 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
GNE-206ENST00000543356 SMR3BP02814 79 aaPredicted RBP5.51□□□□□ -1.53
GNE-206ENST00000543356 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
GNE-206ENST00000543356 ZCCHC13Q8WW36 166 aaKnown RBP5.51□□□□□ -1.53
GNE-206ENST00000543356 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
GNE-206ENST00000543356 A0A087X002 238 aa5.5□□□□□ -1.53
GNE-206ENST00000543356 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
GNE-206ENST00000543356 KRTAP13-2Q52LG2 175 aa5.49□□□□□ -1.53
GNE-206ENST00000543356 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
GNE-206ENST00000543356 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
GNE-206ENST00000543356 Q8N9P0 234 aaPredicted RBP5.48□□□□□ -1.53
GNE-206ENST00000543356 Q75L30 129 aa5.48□□□□□ -1.53
GNE-206ENST00000543356 DSCR10P59022 87 aa5.47□□□□□ -1.53
GNE-206ENST00000543356 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
GNE-206ENST00000543356 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
GNE-206ENST00000543356 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
GNE-206ENST00000543356 A6NED7 52 aa5.45□□□□□ -1.54
GNE-206ENST00000543356 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
GNE-206ENST00000543356 Q96NJ1 140 aa5.45□□□□□ -1.54
GNE-206ENST00000543356 FAM229AH3BQW9 127 aa5.44□□□□□ -1.54
GNE-206ENST00000543356 K7EQZ3 153 aa5.43□□□□□ -1.54
GNE-206ENST00000543356 DEFB116Q30KQ4 102 aa5.43□□□□□ -1.54
GNE-206ENST00000543356 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
GNE-206ENST00000543356 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
GNE-206ENST00000543356 LIMD2Q9BT23 127 aa5.42□□□□□ -1.54
GNE-206ENST00000543356 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
GNE-206ENST00000543356 A8MWP4 228 aa5.42□□□□□ -1.54
GNE-206ENST00000543356 MP68P56378 58 aa5.41□□□□□ -1.54
GNE-206ENST00000543356 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
GNE-206ENST00000543356 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
GNE-206ENST00000543356 Q5VSD8 79 aa5.4□□□□□ -1.54
GNE-206ENST00000543356 LINC00313P59037 77 aa5.4□□□□□ -1.55
GNE-206ENST00000543356 FAT1Q14517 4588 aa5.4□□□□□ -1.55
GNE-206ENST00000543356 ADM2Q7Z4H4 148 aa5.39□□□□□ -1.55
GNE-206ENST00000543356 HSPG2P98160 4391 aa5.39□□□□□ -1.55
GNE-206ENST00000543356 LOC101927531A0A1B0GV80 90 aa5.39□□□□□ -1.55
GNE-206ENST00000543356 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
GNE-206ENST00000543356 NDUFB1O75438 58 aa5.38□□□□□ -1.55
GNE-206ENST00000543356 SPINK1P00995 79 aa5.38□□□□□ -1.55
GNE-206ENST00000543356 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
GNE-206ENST00000543356 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
GNE-206ENST00000543356 RYR1P21817 5038 aa5.37□□□□□ -1.55
GNE-206ENST00000543356 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
GNE-206ENST00000543356 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
GNE-206ENST00000543356 A0A1B0GVX0 72 aa5.35□□□□□ -1.55
GNE-206ENST00000543356 MMP24-AS1A0A0U1RRL7 71 aa5.34□□□□□ -1.55
GNE-206ENST00000543356 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
GNE-206ENST00000543356 SPINK7P58062 85 aa5.34□□□□□ -1.55
GNE-206ENST00000543356 Q8N1X5 172 aa5.34□□□□□ -1.55
GNE-206ENST00000543356 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
GNE-206ENST00000543356 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
GNE-206ENST00000543356 WFDC13Q8IUB5 93 aa5.32□□□□□ -1.56
GNE-206ENST00000543356 C8orf17Q9NRJ1 99 aa5.32□□□□□ -1.56
GNE-206ENST00000543356 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
GNE-206ENST00000543356 EPPK1P58107 5090 aaKnown RBP5.32□□□□□ -1.56
GNE-206ENST00000543356 COA5Q86WW8 74 aa5.29□□□□□ -1.56
GNE-206ENST00000543356 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
GNE-206ENST00000543356 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
GNE-206ENST00000543356 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
GNE-206ENST00000543356 NOTCH2NLQ7Z3S9 236 aa5.26□□□□□ -1.57
GNE-206ENST00000543356 MRPL34Q9BQ48 92 aaKnown RBP5.26□□□□□ -1.57
GNE-206ENST00000543356 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
GNE-206ENST00000543356 TNXBP22105 4242 aa5.24□□□□□ -1.57
GNE-206ENST00000543356 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
GNE-206ENST00000543356 TP53AIP1Q9HCN2 124 aa5.23□□□□□ -1.57
GNE-206ENST00000543356 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
GNE-206ENST00000543356 KRTAP16-1A8MUX0 517 aa5.21□□□□□ -1.58
GNE-206ENST00000543356 H0Y9P7 68 aa5.21□□□□□ -1.58
GNE-206ENST00000543356 MT1HL1P0DM35 61 aa5.2□□□□□ -1.58
GNE-206ENST00000543356 RETNLBQ9BQ08 111 aa5.2□□□□□ -1.58
GNE-206ENST00000543356 LRP1Q07954 4544 aaKnown RBP5.2□□□□□ -1.58
GNE-206ENST00000543356 H3BPC8 53 aa5.19□□□□□ -1.58
GNE-206ENST00000543356 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
GNE-206ENST00000543356 IGLV7-46A0A075B6I9 117 aa5.16□□□□□ -1.58
GNE-206ENST00000543356 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
GNE-206ENST00000543356 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
GNE-206ENST00000543356 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
GNE-206ENST00000543356 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
GNE-206ENST00000543356 PCOTHQ58A44 107 aa5.12□□□□□ -1.59
GNE-206ENST00000543356 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
GNE-206ENST00000543356 Q5W150 140 aa5.12□□□□□ -1.59
GNE-206ENST00000543356 HRES1P13985 223 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms