RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 PCOTHQ58A44 107 aa9.9□□□□□ -0.83
KDM2B-216ENST00000543025 C1orf134Q5TEV5 83 aa9.9□□□□□ -0.83
KDM2B-216ENST00000543025 LIMD2Q9BT23 127 aa9.9□□□□□ -0.83
KDM2B-216ENST00000543025 NDUFS5O43920 106 aa9.89□□□□□ -0.83
KDM2B-216ENST00000543025 ANAPC11Q9NYG5 84 aa9.89□□□□□ -0.83
KDM2B-216ENST00000543025 COA5Q86WW8 74 aa9.89□□□□□ -0.83
KDM2B-216ENST00000543025 FRAS1Q86XX4 4008 aa9.88□□□□□ -0.83
KDM2B-216ENST00000543025 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
KDM2B-216ENST00000543025 KMT2CQ8NEZ4 4911 aaKnown RBP9.88□□□□□ -0.83
KDM2B-216ENST00000543025 Q5VV11 94 aa9.88□□□□□ -0.83
KDM2B-216ENST00000543025 CD164Q04900 197 aa9.87□□□□□ -0.83
KDM2B-216ENST00000543025 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
KDM2B-216ENST00000543025 RYR2Q92736 4967 aa9.84□□□□□ -0.83
KDM2B-216ENST00000543025 DNAH8Q96JB1 4490 aa9.83□□□□□ -0.84
KDM2B-216ENST00000543025 A0A087X002 238 aa9.81□□□□□ -0.84
KDM2B-216ENST00000543025 NOTCH2NLQ7Z3S9 236 aa9.81□□□□□ -0.84
KDM2B-216ENST00000543025 PRR15LQ9BU68 103 aa9.81□□□□□ -0.84
KDM2B-216ENST00000543025 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
KDM2B-216ENST00000543025 IGLV7-43P04211 117 aa9.78□□□□□ -0.84
KDM2B-216ENST00000543025 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.84
KDM2B-216ENST00000543025 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
KDM2B-216ENST00000543025 LOC101927531A0A1B0GV80 90 aa9.76□□□□□ -0.85
KDM2B-216ENST00000543025 CIRBP-AS1Q8TBR5 109 aa9.75□□□□□ -0.85
KDM2B-216ENST00000543025 Q75L30 129 aa9.74□□□□□ -0.85
KDM2B-216ENST00000543025 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
KDM2B-216ENST00000543025 A8MU10 97 aa9.72□□□□□ -0.85
KDM2B-216ENST00000543025 RYR3Q15413 4870 aa9.71□□□□□ -0.86
KDM2B-216ENST00000543025 HRES1P13985 223 aa9.71□□□□□ -0.86
KDM2B-216ENST00000543025 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
KDM2B-216ENST00000543025 SPAG11AQ6PDA7 123 aa9.69□□□□□ -0.86
KDM2B-216ENST00000543025 LINC01558Q9Y6Z2 57 aa9.69□□□□□ -0.86
KDM2B-216ENST00000543025 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
KDM2B-216ENST00000543025 Q5W150 140 aa9.68□□□□□ -0.86
KDM2B-216ENST00000543025 PKD1P98161 4303 aa9.68□□□□□ -0.86
KDM2B-216ENST00000543025 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
KDM2B-216ENST00000543025 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
KDM2B-216ENST00000543025 A6NED7 52 aa9.66□□□□□ -0.86
KDM2B-216ENST00000543025 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
KDM2B-216ENST00000543025 DNAH5Q8TE73 4624 aa9.64□□□□□ -0.87
KDM2B-216ENST00000543025 LCA10Q71F78 164 aa9.62□□□□□ -0.87
KDM2B-216ENST00000543025 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
KDM2B-216ENST00000543025 LINC00313P59037 77 aa9.59□□□□□ -0.87
KDM2B-216ENST00000543025 CDC42SE1Q9NRR8 79 aa9.58□□□□□ -0.88
KDM2B-216ENST00000543025 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
KDM2B-216ENST00000543025 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
KDM2B-216ENST00000543025 PKHD1P08F94 4074 aa9.56□□□□□ -0.88
KDM2B-216ENST00000543025 ACYP2P14621 99 aa9.56□□□□□ -0.88
KDM2B-216ENST00000543025 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
KDM2B-216ENST00000543025 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
KDM2B-216ENST00000543025 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
KDM2B-216ENST00000543025 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
KDM2B-216ENST00000543025 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
KDM2B-216ENST00000543025 Q6ZSA8 131 aa9.49□□□□□ -0.89
KDM2B-216ENST00000543025 SPINK7P58062 85 aa9.49□□□□□ -0.89
KDM2B-216ENST00000543025 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
KDM2B-216ENST00000543025 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
KDM2B-216ENST00000543025 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
KDM2B-216ENST00000543025 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
KDM2B-216ENST00000543025 SEC61GP60059 68 aa9.46□□□□□ -0.9
KDM2B-216ENST00000543025 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
KDM2B-216ENST00000543025 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
KDM2B-216ENST00000543025 A6NN06 94 aa9.43□□□□□ -0.9
KDM2B-216ENST00000543025 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
KDM2B-216ENST00000543025 APOBP04114 4563 aaKnown RBP9.37□□□□□ -0.91
KDM2B-216ENST00000543025 EPPK1P58107 5090 aaKnown RBP9.36□□□□□ -0.91
KDM2B-216ENST00000543025 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
KDM2B-216ENST00000543025 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
KDM2B-216ENST00000543025 A0A1B0GU69 56 aa9.33□□□□□ -0.92
KDM2B-216ENST00000543025 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
KDM2B-216ENST00000543025 VPS13BQ7Z7G8 4022 aa9.32□□□□□ -0.92
KDM2B-216ENST00000543025 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
KDM2B-216ENST00000543025 SPINK1P00995 79 aa9.32□□□□□ -0.92
KDM2B-216ENST00000543025 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
KDM2B-216ENST00000543025 SMR3BP02814 79 aaPredicted RBP9.24□□□□□ -0.93
KDM2B-216ENST00000543025 HSPG2P98160 4391 aa9.22□□□□□ -0.93
KDM2B-216ENST00000543025 RBM12B-AS1Q9P1G2 102 aa9.2□□□□□ -0.94
KDM2B-216ENST00000543025 RPS29P62273 56 aaKnown RBP9.2□□□□□ -0.94
KDM2B-216ENST00000543025 SPATA8Q6RVD6 105 aa9.2□□□□□ -0.94
KDM2B-216ENST00000543025 RYR1P21817 5038 aa9.19□□□□□ -0.94
KDM2B-216ENST00000543025 LINC00304Q8N9R0 145 aa9.19□□□□□ -0.94
KDM2B-216ENST00000543025 FAT1Q14517 4588 aa9.18□□□□□ -0.94
KDM2B-216ENST00000543025 UQCR11O14957 56 aa9.18□□□□□ -0.94
KDM2B-216ENST00000543025 KIAA1109Q2LD37 5005 aa9.17□□□□□ -0.94
KDM2B-216ENST00000543025 MIR22HGQ0VDD5 57 aa9.15□□□□□ -0.94
KDM2B-216ENST00000543025 KRTAP10-4P60372 401 aaPredicted RBP9.12□□□□□ -0.95
KDM2B-216ENST00000543025 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
KDM2B-216ENST00000543025 Q8N1X5 172 aa9.1□□□□□ -0.95
KDM2B-216ENST00000543025 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
KDM2B-216ENST00000543025 Q5VSD8 79 aa9.08□□□□□ -0.96
KDM2B-216ENST00000543025 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
KDM2B-216ENST00000543025 PKHD1L1Q86WI1 4243 aa9.02□□□□□ -0.97
KDM2B-216ENST00000543025 C9orf92A6NGG3 77 aa9.01□□□□□ -0.97
KDM2B-216ENST00000543025 A8MUU9 505 aa9.01□□□□□ -0.97
KDM2B-216ENST00000543025 PRAC1Q96KF2 57 aa8.97□□□□□ -0.97
KDM2B-216ENST00000543025 ADM2Q7Z4H4 148 aa8.95□□□□□ -0.98
KDM2B-216ENST00000543025 HERC2O95714 4834 aa8.93□□□□□ -0.98
KDM2B-216ENST00000543025 KRTAP4-5Q9BYR2 181 aa8.93□□□□□ -0.98
KDM2B-216ENST00000543025 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.99
KDM2B-216ENST00000543025 LRP1Q07954 4544 aaKnown RBP8.83□□□□□ -1
KDM2B-216ENST00000543025 H0YAA0 97 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms