RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 SZT2Q5T011 3432 aa0.65□□□□□ -2.31
GTF2H3-210ENST00000543005 KMT2AQ03164 3969 aa0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 KMT2CQ8NEZ4 4911 aaKnown RBP0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 MYO9AB2RTY4 2548 aa0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 LRRK2Q5S007 2527 aa0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 CELSR1Q9NYQ6 3014 aa0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 EPG5Q9HCE0 2579 aa0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
GTF2H3-210ENST00000543005 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
GTF2H3-210ENST00000543005 NEBP20929 6669 aa0.63□□□□□ -2.31
GTF2H3-210ENST00000543005 PRLHP81277 87 aa0.63□□□□□ -2.31
GTF2H3-210ENST00000543005 LAMA2P24043 3122 aaKnown RBP0.63□□□□□ -2.31
GTF2H3-210ENST00000543005 PDZD2O15018 2839 aa0.63□□□□□ -2.31
GTF2H3-210ENST00000543005 TRPM2O94759 1503 aa0.63□□□□□ -2.31
GTF2H3-210ENST00000543005 LYSTQ99698 3801 aa0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 RYR2Q92736 4967 aa0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 GCN1Q92616 2671 aaKnown RBP0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 DNHD1Q96M86 4753 aa0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 CCDC168Q8NDH2 2452 aa0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 CREBBPQ92793 2442 aa0.62□□□□□ -2.31
GTF2H3-210ENST00000543005 USP9YO00507 2555 aaPredicted RBP0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 PKD1L1Q8TDX9 2849 aa0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 KALRNO60229 2985 aa0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 SMIM2Q9BVW6 85 aa0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 KAAG1Q9UBP8 84 aa0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 EPPK1P58107 5090 aaKnown RBP0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 TENM2Q9NT68 2774 aa0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 ABCA13Q86UQ4 5058 aa0.61□□□□□ -2.31
GTF2H3-210ENST00000543005 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 DOPEY1Q5JWR5 2465 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 IGSF10Q6WRI0 2623 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 H3BUA1 57 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 WFDC10BQ8IUB3 73 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 SAMD9LQ8IVG5 1584 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
GTF2H3-210ENST00000543005 VCANP13611 3396 aa0.59□□□□□ -2.31
GTF2H3-210ENST00000543005 RYR3Q15413 4870 aa0.59□□□□□ -2.31
GTF2H3-210ENST00000543005 FASNP49327 2511 aaKnown RBP0.59□□□□□ -2.31
GTF2H3-210ENST00000543005 HYDINQ4G0P3 5121 aa0.59□□□□□ -2.32
GTF2H3-210ENST00000543005 CSMD1Q96PZ7 3565 aa0.59□□□□□ -2.32
GTF2H3-210ENST00000543005 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
GTF2H3-210ENST00000543005 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
GTF2H3-210ENST00000543005 CEP290O15078 2479 aa0.58□□□□□ -2.32
GTF2H3-210ENST00000543005 HERC1Q15751 4861 aa0.58□□□□□ -2.32
GTF2H3-210ENST00000543005 VPS13BQ7Z7G8 4022 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 FLNAP21333 2647 aaKnown RBP0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 HIVEP3Q5T1R4 2406 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 CLTCL1P53675 1640 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 FLNCQ14315 2725 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 H0YGG7 62 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 LPAP08519 4548 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 PKD1P98161 4303 aa0.57□□□□□ -2.32
GTF2H3-210ENST00000543005 NBEAL1Q6ZS30 2694 aa0.56□□□□□ -2.32
GTF2H3-210ENST00000543005 SSPOA2VEC9 5147 aa0.56□□□□□ -2.32
GTF2H3-210ENST00000543005 MKI67P46013 3256 aaKnown RBP0.56□□□□□ -2.32
GTF2H3-210ENST00000543005 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
GTF2H3-210ENST00000543005 NSD1Q96L73 2696 aaPredicted RBP0.55□□□□□ -2.32
GTF2H3-210ENST00000543005 CFAP46Q8IYW2 2715 aa0.55□□□□□ -2.32
GTF2H3-210ENST00000543005 EYSQ5T1H1 3165 aa0.55□□□□□ -2.32
GTF2H3-210ENST00000543005 NDUFA1O15239 70 aa0.55□□□□□ -2.32
GTF2H3-210ENST00000543005 KMT2DO14686 5537 aa0.55□□□□□ -2.32
GTF2H3-210ENST00000543005 BOD1L1Q8NFC6 3051 aa0.55□□□□□ -2.32
GTF2H3-210ENST00000543005 MUC3AQ02505 3323 aa0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 UBR5O95071 2799 aaPredicted RBP0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 SACSQ9NZJ4 4579 aa0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 BIRC6Q9NR09 4857 aa0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 ZANQ9Y493 2812 aa0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
GTF2H3-210ENST00000543005 CEP295Q9C0D2 2601 aa0.53□□□□□ -2.32
GTF2H3-210ENST00000543005 COL12A1Q99715 3063 aa0.53□□□□□ -2.32
GTF2H3-210ENST00000543005 IGLV5-48A0A075B6I7 105 aa0.53□□□□□ -2.32
GTF2H3-210ENST00000543005 SPEGQ15772 3267 aa0.53□□□□□ -2.32
GTF2H3-210ENST00000543005 NBASA2RRP1 2371 aa0.53□□□□□ -2.33
GTF2H3-210ENST00000543005 LAMA3Q16787 3333 aa0.53□□□□□ -2.33
GTF2H3-210ENST00000543005 STAB2Q8WWQ8 2551 aa0.52□□□□□ -2.33
GTF2H3-210ENST00000543005 CENPFP49454 3210 aa0.52□□□□□ -2.33
GTF2H3-210ENST00000543005 MAP1BP46821 2468 aaKnown RBP0.52□□□□□ -2.33
GTF2H3-210ENST00000543005 MMP24-AS1A0A0U1RRL7 71 aa0.52□□□□□ -2.33
GTF2H3-210ENST00000543005 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 MXRA5Q9NR99 2828 aa0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 SPRR2DP22532 72 aa0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 UNC80Q8N2C7 3258 aa0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 SPTBN5Q9NRC6 3674 aaKnown RBP0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 RELNP78509 3460 aa0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 RANBP2P49792 3224 aaKnown RBP0.51□□□□□ -2.33
GTF2H3-210ENST00000543005 HIVEP1P15822 2718 aa0.5□□□□□ -2.33
GTF2H3-210ENST00000543005 ACANP16112 2415 aa0.5□□□□□ -2.33
GTF2H3-210ENST00000543005 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
GTF2H3-210ENST00000543005 TGP01266 2768 aa0.5□□□□□ -2.33
GTF2H3-210ENST00000543005 SPG11Q96JI7 2443 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 UTP20O75691 2785 aaKnown RBP0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 ITPR2Q14571 2701 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 NOP10Q9NPE3 64 aaKnown RBP0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 WNK1Q9H4A3 2382 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms