RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 LRP1BQ9NZR2 4599 aa6.33□□□□□ -1.4
NECAP1-206ENST00000542095 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
NECAP1-206ENST00000542095 SPINK6Q6UWN8 80 aa6.33□□□□□ -1.4
NECAP1-206ENST00000542095 TRAV22A0A0B4J277 110 aa6.32□□□□□ -1.4
NECAP1-206ENST00000542095 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
NECAP1-206ENST00000542095 MRPL34Q9BQ48 92 aaKnown RBP6.31□□□□□ -1.4
NECAP1-206ENST00000542095 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
NECAP1-206ENST00000542095 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
NECAP1-206ENST00000542095 NDUFS5O43920 106 aa6.29□□□□□ -1.4
NECAP1-206ENST00000542095 Q5XG85 94 aa6.29□□□□□ -1.4
NECAP1-206ENST00000542095 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
NECAP1-206ENST00000542095 SMIM26A0A096LP01 95 aa6.28□□□□□ -1.4
NECAP1-206ENST00000542095 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
NECAP1-206ENST00000542095 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
NECAP1-206ENST00000542095 PLA2G1BP04054 148 aaKnown RBP6.26□□□□□ -1.41
NECAP1-206ENST00000542095 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
NECAP1-206ENST00000542095 LIMD2Q9BT23 127 aa6.26□□□□□ -1.41
NECAP1-206ENST00000542095 A0A1B0GVY2 172 aa6.25□□□□□ -1.41
NECAP1-206ENST00000542095 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
NECAP1-206ENST00000542095 C1orf195Q5TG92 126 aa6.24□□□□□ -1.41
NECAP1-206ENST00000542095 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
NECAP1-206ENST00000542095 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
NECAP1-206ENST00000542095 PRR4Q16378 134 aa6.23□□□□□ -1.41
NECAP1-206ENST00000542095 LINC00313P59037 77 aa6.22□□□□□ -1.41
NECAP1-206ENST00000542095 FP248Q71RG6 208 aaPredicted RBP6.22□□□□□ -1.41
NECAP1-206ENST00000542095 C4orf26Q17RF5 130 aa6.21□□□□□ -1.42
NECAP1-206ENST00000542095 RYR3Q15413 4870 aa6.21□□□□□ -1.42
NECAP1-206ENST00000542095 SPINK1P00995 79 aa6.2□□□□□ -1.42
NECAP1-206ENST00000542095 SMR3BP02814 79 aaPredicted RBP6.2□□□□□ -1.42
NECAP1-206ENST00000542095 DYNC1H1Q14204 4646 aaKnown RBP6.2□□□□□ -1.42
NECAP1-206ENST00000542095 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
NECAP1-206ENST00000542095 IGLV7-46A0A075B6I9 117 aa6.17□□□□□ -1.42
NECAP1-206ENST00000542095 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
NECAP1-206ENST00000542095 LOC101927531A0A1B0GV80 90 aa6.16□□□□□ -1.42
NECAP1-206ENST00000542095 Q5W150 140 aa6.16□□□□□ -1.42
NECAP1-206ENST00000542095 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
NECAP1-206ENST00000542095 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
NECAP1-206ENST00000542095 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
NECAP1-206ENST00000542095 SPAG11AQ6PDA7 123 aa6.15□□□□□ -1.42
NECAP1-206ENST00000542095 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.42
NECAP1-206ENST00000542095 RYR2Q92736 4967 aa6.15□□□□□ -1.42
NECAP1-206ENST00000542095 APOBP04114 4563 aaKnown RBP6.14□□□□□ -1.43
NECAP1-206ENST00000542095 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
NECAP1-206ENST00000542095 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
NECAP1-206ENST00000542095 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
NECAP1-206ENST00000542095 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-206ENST00000542095 J3QL48 77 aa6.11□□□□□ -1.43
NECAP1-206ENST00000542095 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
NECAP1-206ENST00000542095 Q1T7F1 81 aa6.09□□□□□ -1.43
NECAP1-206ENST00000542095 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
NECAP1-206ENST00000542095 COA5Q86WW8 74 aa6.08□□□□□ -1.44
NECAP1-206ENST00000542095 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
NECAP1-206ENST00000542095 FAT1Q14517 4588 aa6.07□□□□□ -1.44
NECAP1-206ENST00000542095 V9GYY9 64 aa6.06□□□□□ -1.44
NECAP1-206ENST00000542095 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
NECAP1-206ENST00000542095 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
NECAP1-206ENST00000542095 HRES1P13985 223 aa6.01□□□□□ -1.45
NECAP1-206ENST00000542095 H3BS24 57 aa6□□□□□ -1.45
NECAP1-206ENST00000542095 EPPK1P58107 5090 aaKnown RBP5.99□□□□□ -1.45
NECAP1-206ENST00000542095 PSPHP1O15172 72 aa5.99□□□□□ -1.45
NECAP1-206ENST00000542095 ACYP2P14621 99 aa5.99□□□□□ -1.45
NECAP1-206ENST00000542095 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
NECAP1-206ENST00000542095 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
NECAP1-206ENST00000542095 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
NECAP1-206ENST00000542095 Q5VSD8 79 aa5.96□□□□□ -1.46
NECAP1-206ENST00000542095 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
NECAP1-206ENST00000542095 A8MUN3 132 aa5.95□□□□□ -1.46
NECAP1-206ENST00000542095 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
NECAP1-206ENST00000542095 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
NECAP1-206ENST00000542095 A8MUU9 505 aa5.93□□□□□ -1.46
NECAP1-206ENST00000542095 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
NECAP1-206ENST00000542095 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
NECAP1-206ENST00000542095 HSPG2P98160 4391 aa5.92□□□□□ -1.46
NECAP1-206ENST00000542095 CHKB-CPT1BH3BT56 60 aa5.92□□□□□ -1.46
NECAP1-206ENST00000542095 Q5VV11 94 aa5.92□□□□□ -1.46
NECAP1-206ENST00000542095 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
NECAP1-206ENST00000542095 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
NECAP1-206ENST00000542095 Q8N1X5 172 aa5.91□□□□□ -1.46
NECAP1-206ENST00000542095 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
NECAP1-206ENST00000542095 TNXBP22105 4242 aa5.88□□□□□ -1.47
NECAP1-206ENST00000542095 Q75L30 129 aa5.87□□□□□ -1.47
NECAP1-206ENST00000542095 RYR1P21817 5038 aa5.86□□□□□ -1.47
NECAP1-206ENST00000542095 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
NECAP1-206ENST00000542095 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.48
NECAP1-206ENST00000542095 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.48
NECAP1-206ENST00000542095 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
NECAP1-206ENST00000542095 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
NECAP1-206ENST00000542095 A6NED7 52 aa5.8□□□□□ -1.48
NECAP1-206ENST00000542095 SPINK7P58062 85 aa5.79□□□□□ -1.48
NECAP1-206ENST00000542095 KIAA1109Q2LD37 5005 aa5.78□□□□□ -1.48
NECAP1-206ENST00000542095 ATP11AUNQ6ZP68 121 aa5.75□□□□□ -1.49
NECAP1-206ENST00000542095 A0A1B0GU69 56 aa5.75□□□□□ -1.49
NECAP1-206ENST00000542095 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
NECAP1-206ENST00000542095 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
NECAP1-206ENST00000542095 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
NECAP1-206ENST00000542095 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
NECAP1-206ENST00000542095 A8MU10 97 aa5.72□□□□□ -1.49
NECAP1-206ENST00000542095 LCA10Q71F78 164 aa5.72□□□□□ -1.49
NECAP1-206ENST00000542095 SPTSSBQ8NFR3 76 aa5.72□□□□□ -1.49
NECAP1-206ENST00000542095 DMBT1Q9UGM3 2413 aaPredicted RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms