RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 WFDC10BQ8IUB3 73 aa0.82□□□□□ -2.28
LEMD3-204ENST00000542032 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
LEMD3-204ENST00000542032 CFAP47Q6ZTR5 3102 aa0.82□□□□□ -2.28
LEMD3-204ENST00000542032 HIVEP3Q5T1R4 2406 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 SPG11Q96JI7 2443 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 DCHS1Q96JQ0 3298 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 BOD1L1Q8NFC6 3051 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 CSPG4Q6UVK1 2322 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 CEP295Q9C0D2 2601 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 ASPMQ8IZT6 3477 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 NDUFA1O15239 70 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 PRLHP81277 87 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 KAAG1Q9UBP8 84 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 S4R3F8 94 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 ADGRG4Q8IZF6 3080 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 USP9YO00507 2555 aaPredicted RBP0.81□□□□□ -2.28
LEMD3-204ENST00000542032 TACC2O95359 2948 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 KALRNO60229 2985 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
LEMD3-204ENST00000542032 CREBBPQ92793 2442 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 NCOR2Q9Y618 2525 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 ZFHX4Q86UP3 3567 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 ATMQ13315 3056 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 H0YGG7 62 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 SPINK1P00995 79 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 SMR3AQ99954 134 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 ZNF469Q96JG9 3925 aaPredicted RBP0.8□□□□□ -2.28
LEMD3-204ENST00000542032 ANKHD1Q8IWZ3 2542 aaKnown RBP0.8□□□□□ -2.28
LEMD3-204ENST00000542032 DCHS2Q6V1P9 2916 aa0.8□□□□□ -2.28
LEMD3-204ENST00000542032 LAMA5O15230 3695 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
LEMD3-204ENST00000542032 AKAP13Q12802 2813 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 PIEZO1Q92508 2521 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 USP9XQ93008 2570 aaPredicted RBP0.79□□□□□ -2.28
LEMD3-204ENST00000542032 CHD8Q9HCK8 2581 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 STATHP02808 62 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 U3KQA8 63 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 IGF2RP11717 2491 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 MYO9AB2RTY4 2548 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 CACNA1AO00555 2505 aa0.79□□□□□ -2.28
LEMD3-204ENST00000542032 PTPN13Q12923 2485 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 TLN2Q9Y4G6 2542 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 RELNP78509 3460 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 CENPEQ02224 2701 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 FLNCQ14315 2725 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 SMG1Q96Q15 3661 aaKnown RBP0.78□□□□□ -2.28
LEMD3-204ENST00000542032 FBN2P35556 2912 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 ZZEF1O43149 2961 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
LEMD3-204ENST00000542032 ACACBO00763 2458 aa0.78□□□□□ -2.28
LEMD3-204ENST00000542032 BSNQ9UPA5 3926 aa0.78□□□□□ -2.29
LEMD3-204ENST00000542032 LRBAP50851 2863 aa0.78□□□□□ -2.29
LEMD3-204ENST00000542032 CSMD3Q7Z407 3707 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 ABCA2Q9BZC7 2435 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 SETD2Q9BYW2 2564 aaPredicted RBP0.77□□□□□ -2.29
LEMD3-204ENST00000542032 CFAP46Q8IYW2 2715 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 HRNRQ86YZ3 2850 aaPredicted RBP0.77□□□□□ -2.29
LEMD3-204ENST00000542032 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
LEMD3-204ENST00000542032 DEFB110Q30KQ9 67 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 ZFYVE26Q68DK2 2539 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 MYO18BQ8IUG5 2567 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 ZANQ9Y493 2812 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 CELSR1Q9NYQ6 3014 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 CSMD1Q96PZ7 3565 aa0.77□□□□□ -2.29
LEMD3-204ENST00000542032 COL12A1Q99715 3063 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 VWFP04275 2813 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 NF1P21359 2839 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 MXRA5Q9NR99 2828 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 LRRK2Q5S007 2527 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 NAV2Q8IVL1 2488 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 ACANP16112 2415 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 WNK1Q9H4A3 2382 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 KRTAP2-3P0C7H8 128 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 ARHGAP5-AS1Q96IT6 56 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 KRTAP2-4Q9BYR9 128 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 TTTY10Q9BZA0 68 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 APCP25054 2843 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 TEX15Q9BXT5 2789 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 EPG5Q9HCE0 2579 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 DOPEY1Q5JWR5 2465 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 PKD1L2Q7Z442 2459 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 SVEP1Q4LDE5 3571 aa0.76□□□□□ -2.29
LEMD3-204ENST00000542032 ITPR1Q14643 2758 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 H3BSH0 61 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 DEFB135Q30KP9 77 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 IGSF10Q6WRI0 2623 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 MTORP42345 2549 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 CRYBG3Q68DQ2 2970 aa0.75□□□□□ -2.29
LEMD3-204ENST00000542032 ITPR2Q14571 2701 aa0.74□□□□□ -2.29
LEMD3-204ENST00000542032 M0R2T5 61 aa0.74□□□□□ -2.29
LEMD3-204ENST00000542032 UTP20O75691 2785 aaKnown RBP0.74□□□□□ -2.29
LEMD3-204ENST00000542032 USP24Q9UPU5 2620 aa0.74□□□□□ -2.29
LEMD3-204ENST00000542032 CHD6Q8TD26 2715 aa0.73□□□□□ -2.29
LEMD3-204ENST00000542032 FASNP49327 2511 aaKnown RBP0.73□□□□□ -2.29
LEMD3-204ENST00000542032 ATRQ13535 2644 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms