RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 KRTAP9-6A0A140TA67 174 aa9.81□□□□□ -0.84
RAB35-204ENST00000540803 BATFQ16520 125 aa9.81□□□□□ -0.84
RAB35-204ENST00000540803 C21orf62-AS1Q17RA5 79 aa9.81□□□□□ -0.84
RAB35-204ENST00000540803 LOC110117498A0A087WWA1 95 aa9.8□□□□□ -0.84
RAB35-204ENST00000540803 LYRM7Q5U5X0 104 aa9.8□□□□□ -0.84
RAB35-204ENST00000540803 C8orf87E5RJ46 101 aa9.79□□□□□ -0.84
RAB35-204ENST00000540803 J3KT08 172 aa9.78□□□□□ -0.84
RAB35-204ENST00000540803 TRBV20-1A0A075B6N2 111 aa9.77□□□□□ -0.85
RAB35-204ENST00000540803 A0A1B0GW54 56 aa9.75□□□□□ -0.85
RAB35-204ENST00000540803 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
RAB35-204ENST00000540803 PDE6GP18545 87 aa9.74□□□□□ -0.85
RAB35-204ENST00000540803 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
RAB35-204ENST00000540803 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
RAB35-204ENST00000540803 NDUFB1O75438 58 aa9.69□□□□□ -0.86
RAB35-204ENST00000540803 FSIP2Q5CZC0 6907 aa9.68□□□□□ -0.86
RAB35-204ENST00000540803 A0A1W2PPM0 123 aa9.67□□□□□ -0.86
RAB35-204ENST00000540803 A8MWP4 228 aa9.67□□□□□ -0.86
RAB35-204ENST00000540803 HRES1P13985 223 aa9.67□□□□□ -0.86
RAB35-204ENST00000540803 IGKV3D-7A0A0C4DH55 119 aa9.65□□□□□ -0.86
RAB35-204ENST00000540803 H3BT86 120 aa9.65□□□□□ -0.86
RAB35-204ENST00000540803 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
RAB35-204ENST00000540803 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
RAB35-204ENST00000540803 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
RAB35-204ENST00000540803 ZCCHC13Q8WW36 166 aaKnown RBP9.64□□□□□ -0.87
RAB35-204ENST00000540803 C8orf17Q9NRJ1 99 aa9.64□□□□□ -0.87
RAB35-204ENST00000540803 CRCT1Q9UGL9 99 aa9.62□□□□□ -0.87
RAB35-204ENST00000540803 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
RAB35-204ENST00000540803 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
RAB35-204ENST00000540803 NREPQ16612 68 aa9.61□□□□□ -0.87
RAB35-204ENST00000540803 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
RAB35-204ENST00000540803 PRR15Q8IV56 129 aa9.58□□□□□ -0.88
RAB35-204ENST00000540803 Q6ZVQ6 151 aa9.56□□□□□ -0.88
RAB35-204ENST00000540803 KRTAP9-8Q9BYQ0 159 aa9.55□□□□□ -0.88
RAB35-204ENST00000540803 SPINK7P58062 85 aa9.54□□□□□ -0.88
RAB35-204ENST00000540803 SPCS1Q9Y6A9 102 aa9.54□□□□□ -0.88
RAB35-204ENST00000540803 MMP24-AS1A0A0U1RRL7 71 aa9.52□□□□□ -0.89
RAB35-204ENST00000540803 K7EQZ3 153 aa9.5□□□□□ -0.89
RAB35-204ENST00000540803 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
RAB35-204ENST00000540803 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
RAB35-204ENST00000540803 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
RAB35-204ENST00000540803 COL5A1-AS1Q5SY13 56 aa9.46□□□□□ -0.9
RAB35-204ENST00000540803 BPY2O14599 106 aa9.45□□□□□ -0.9
RAB35-204ENST00000540803 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
RAB35-204ENST00000540803 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
RAB35-204ENST00000540803 MT2AP02795 61 aa9.41□□□□□ -0.9
RAB35-204ENST00000540803 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
RAB35-204ENST00000540803 K7EP34 96 aa9.39□□□□□ -0.91
RAB35-204ENST00000540803 NDUFS5O43920 106 aa9.38□□□□□ -0.91
RAB35-204ENST00000540803 Q8N9L7 120 aa9.37□□□□□ -0.91
RAB35-204ENST00000540803 MT1FP04733 61 aa9.34□□□□□ -0.91
RAB35-204ENST00000540803 USH2AO75445 5202 aa9.32□□□□□ -0.92
RAB35-204ENST00000540803 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
RAB35-204ENST00000540803 Q5W150 140 aa9.31□□□□□ -0.92
RAB35-204ENST00000540803 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
RAB35-204ENST00000540803 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
RAB35-204ENST00000540803 HCG22E2RYF7 251 aa9.26□□□□□ -0.93
RAB35-204ENST00000540803 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
RAB35-204ENST00000540803 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
RAB35-204ENST00000540803 PCP4L1A6NKN8 68 aa9.25□□□□□ -0.93
RAB35-204ENST00000540803 IGKV2-30P06310 120 aa9.25□□□□□ -0.93
RAB35-204ENST00000540803 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
RAB35-204ENST00000540803 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
RAB35-204ENST00000540803 SSPOA2VEC9 5147 aa9.25□□□□□ -0.93
RAB35-204ENST00000540803 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
RAB35-204ENST00000540803 F8W1H4 67 aa9.2□□□□□ -0.94
RAB35-204ENST00000540803 LCE2BO14633 110 aa9.2□□□□□ -0.94
RAB35-204ENST00000540803 CXCL6P80162 114 aa9.19□□□□□ -0.94
RAB35-204ENST00000540803 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
RAB35-204ENST00000540803 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
RAB35-204ENST00000540803 C4orf26Q17RF5 130 aa9.09□□□□□ -0.95
RAB35-204ENST00000540803 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
RAB35-204ENST00000540803 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
RAB35-204ENST00000540803 FCGBPQ9Y6R7 5405 aaPredicted RBP8.99□□□□□ -0.97
RAB35-204ENST00000540803 KRTAP3-1Q9BYR8 98 aa8.99□□□□□ -0.97
RAB35-204ENST00000540803 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
RAB35-204ENST00000540803 ACYP1P07311 99 aa8.95□□□□□ -0.98
RAB35-204ENST00000540803 FAM240AA0A1B0GVK7 77 aa8.92□□□□□ -0.98
RAB35-204ENST00000540803 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
RAB35-204ENST00000540803 C5orf47Q569G3 176 aa8.89□□□□□ -0.99
RAB35-204ENST00000540803 S4R3F8 94 aa8.88□□□□□ -0.99
RAB35-204ENST00000540803 ATP5EP2Q5VTU8 51 aa8.87□□□□□ -0.99
RAB35-204ENST00000540803 KRTAP19-6Q3LI70 58 aa8.86□□□□□ -0.99
RAB35-204ENST00000540803 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
RAB35-204ENST00000540803 TRAV22A0A0B4J277 110 aa8.84□□□□□ -0.99
RAB35-204ENST00000540803 LCA10Q71F78 164 aa8.84□□□□□ -0.99
RAB35-204ENST00000540803 KRTAP9-7A8MTY7 169 aa8.83□□□□□ -1
RAB35-204ENST00000540803 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
RAB35-204ENST00000540803 CSAG1Q6PB30 78 aa8.8□□□□□ -1
RAB35-204ENST00000540803 LOC101927531A0A1B0GV80 90 aa8.78□□□□□ -1
RAB35-204ENST00000540803 FAM236AA0A1B0GUQ0 79 aa8.75□□□□□ -1.01
RAB35-204ENST00000540803 FAM236BA0A1B0GV22 79 aa8.75□□□□□ -1.01
RAB35-204ENST00000540803 A0A1B0GV90 55 aa8.75□□□□□ -1.01
RAB35-204ENST00000540803 A0A087WVE0 104 aa8.74□□□□□ -1.01
RAB35-204ENST00000540803 UQCRQO14949 82 aa8.74□□□□□ -1.01
RAB35-204ENST00000540803 LINC00643Q86TS7 51 aa8.74□□□□□ -1.01
RAB35-204ENST00000540803 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
RAB35-204ENST00000540803 H0Y9P7 68 aa8.71□□□□□ -1.02
RAB35-204ENST00000540803 ATOX1O00244 68 aa8.69□□□□□ -1.02
RAB35-204ENST00000540803 MACF1Q9UPN3 7388 aaKnown RBP8.68□□□□□ -1.02
RAB35-204ENST00000540803 SPRR2GQ9BYE4 73 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms