RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TRIAP1O43715 76 aa6.02□□□□□ -1.45
COPS7A-211ENST00000540408 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
COPS7A-211ENST00000540408 VPS25Q9BRG1 176 aa6□□□□□ -1.45
COPS7A-211ENST00000540408 COX6CP09669 75 aa5.99□□□□□ -1.45
COPS7A-211ENST00000540408 PSMB2P49721 201 aa5.99□□□□□ -1.45
COPS7A-211ENST00000540408 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
COPS7A-211ENST00000540408 SPATA45Q537H7 98 aa5.99□□□□□ -1.45
COPS7A-211ENST00000540408 LYRM7Q5U5X0 104 aa5.99□□□□□ -1.45
COPS7A-211ENST00000540408 PAM16Q9Y3D7 125 aa5.99□□□□□ -1.45
COPS7A-211ENST00000540408 J3KT08 172 aa5.98□□□□□ -1.45
COPS7A-211ENST00000540408 S100A1P23297 94 aa5.98□□□□□ -1.45
COPS7A-211ENST00000540408 C2orf91Q6ZV80 131 aa5.98□□□□□ -1.45
COPS7A-211ENST00000540408 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
COPS7A-211ENST00000540408 NDUFB1O75438 58 aa5.97□□□□□ -1.45
COPS7A-211ENST00000540408 UBE2V1Q13404 147 aa5.97□□□□□ -1.45
COPS7A-211ENST00000540408 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
COPS7A-211ENST00000540408 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
COPS7A-211ENST00000540408 DSCR8Q96T75 97 aa5.96□□□□□ -1.46
COPS7A-211ENST00000540408 FXYD2P54710 66 aa5.95□□□□□ -1.46
COPS7A-211ENST00000540408 RBM3P98179 157 aaKnown RBP5.95□□□□□ -1.46
COPS7A-211ENST00000540408 VAMP8Q9BV40 100 aa5.95□□□□□ -1.46
COPS7A-211ENST00000540408 C9JAW5 83 aa5.9□□□□□ -1.46
COPS7A-211ENST00000540408 Q6ZQT0 140 aa5.88□□□□□ -1.47
COPS7A-211ENST00000540408 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
COPS7A-211ENST00000540408 IGKV3D-7A0A0C4DH55 119 aa5.87□□□□□ -1.47
COPS7A-211ENST00000540408 K7ERJ3 54 aa5.87□□□□□ -1.47
COPS7A-211ENST00000540408 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
COPS7A-211ENST00000540408 HSD52Q0P140 79 aa5.87□□□□□ -1.47
COPS7A-211ENST00000540408 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
COPS7A-211ENST00000540408 Q6ZVQ6 151 aa5.85□□□□□ -1.47
COPS7A-211ENST00000540408 BAALC-AS2P0C853 105 aa5.84□□□□□ -1.47
COPS7A-211ENST00000540408 A0A1B0GW54 56 aa5.83□□□□□ -1.48
COPS7A-211ENST00000540408 JMJD7-PLA2G4BH0Y9G9 81 aa5.79□□□□□ -1.48
COPS7A-211ENST00000540408 PRR15Q8IV56 129 aa5.79□□□□□ -1.48
COPS7A-211ENST00000540408 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
COPS7A-211ENST00000540408 NDUFS5O43920 106 aa5.78□□□□□ -1.48
COPS7A-211ENST00000540408 PDE6GP18545 87 aa5.78□□□□□ -1.48
COPS7A-211ENST00000540408 TMEM254Q8TBM7 123 aa5.78□□□□□ -1.48
COPS7A-211ENST00000540408 A6NN06 94 aa5.76□□□□□ -1.49
COPS7A-211ENST00000540408 NREPQ16612 68 aa5.76□□□□□ -1.49
COPS7A-211ENST00000540408 LOC110117498A0A087WWA1 95 aa5.75□□□□□ -1.49
COPS7A-211ENST00000540408 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
COPS7A-211ENST00000540408 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
COPS7A-211ENST00000540408 MMP24-AS1A0A0U1RRL7 71 aa5.73□□□□□ -1.49
COPS7A-211ENST00000540408 FAM236AA0A1B0GUQ0 79 aa5.73□□□□□ -1.49
COPS7A-211ENST00000540408 FAM236BA0A1B0GV22 79 aa5.73□□□□□ -1.49
COPS7A-211ENST00000540408 hDV103S1A0JD37 113 aa5.73□□□□□ -1.49
COPS7A-211ENST00000540408 ATXN8Q156A1 80 aa5.73□□□□□ -1.49
COPS7A-211ENST00000540408 UQCR10Q9UDW1 63 aa5.73□□□□□ -1.49
COPS7A-211ENST00000540408 C7orf65Q6ZTY9 151 aa5.72□□□□□ -1.49
COPS7A-211ENST00000540408 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
COPS7A-211ENST00000540408 PYY3Q5JQD4 70 aa5.69□□□□□ -1.5
COPS7A-211ENST00000540408 Q5VV11 94 aa5.69□□□□□ -1.5
COPS7A-211ENST00000540408 C14orf132Q9NPU4 83 aa5.69□□□□□ -1.5
COPS7A-211ENST00000540408 K7EQZ3 153 aa5.66□□□□□ -1.5
COPS7A-211ENST00000540408 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
COPS7A-211ENST00000540408 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
COPS7A-211ENST00000540408 NEBP20929 6669 aa5.65□□□□□ -1.51
COPS7A-211ENST00000540408 Q5W150 140 aa5.64□□□□□ -1.51
COPS7A-211ENST00000540408 MT1BP07438 61 aa5.63□□□□□ -1.51
COPS7A-211ENST00000540408 CSAG1Q6PB30 78 aa5.62□□□□□ -1.51
COPS7A-211ENST00000540408 BPY2O14599 106 aa5.61□□□□□ -1.51
COPS7A-211ENST00000540408 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
COPS7A-211ENST00000540408 NAA38Q9BRA0 125 aaKnown RBP5.6□□□□□ -1.51
COPS7A-211ENST00000540408 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
COPS7A-211ENST00000540408 S4R3F8 94 aa5.6□□□□□ -1.51
COPS7A-211ENST00000540408 HCG22E2RYF7 251 aa5.59□□□□□ -1.51
COPS7A-211ENST00000540408 M0R143 59 aa5.59□□□□□ -1.51
COPS7A-211ENST00000540408 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
COPS7A-211ENST00000540408 CASC2Q6XLA1 102 aa5.59□□□□□ -1.51
COPS7A-211ENST00000540408 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
COPS7A-211ENST00000540408 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
COPS7A-211ENST00000540408 CXCL6P80162 114 aa5.57□□□□□ -1.52
COPS7A-211ENST00000540408 IMUPQ9GZP8 106 aa5.55□□□□□ -1.52
COPS7A-211ENST00000540408 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
COPS7A-211ENST00000540408 LCA10Q71F78 164 aa5.53□□□□□ -1.52
COPS7A-211ENST00000540408 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
COPS7A-211ENST00000540408 Q8N9L7 120 aa5.52□□□□□ -1.53
COPS7A-211ENST00000540408 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
COPS7A-211ENST00000540408 TSTD3H0UI37 97 aa5.5□□□□□ -1.53
COPS7A-211ENST00000540408 H3BT86 120 aa5.49□□□□□ -1.53
COPS7A-211ENST00000540408 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
COPS7A-211ENST00000540408 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
COPS7A-211ENST00000540408 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
COPS7A-211ENST00000540408 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
COPS7A-211ENST00000540408 KMT2DO14686 5537 aa5.41□□□□□ -1.54
COPS7A-211ENST00000540408 TP53AIP1Q9HCN2 124 aa5.41□□□□□ -1.54
COPS7A-211ENST00000540408 BATFQ16520 125 aa5.4□□□□□ -1.54
COPS7A-211ENST00000540408 UBL5Q9BZL1 73 aa5.4□□□□□ -1.54
COPS7A-211ENST00000540408 SMCPP49901 116 aaPredicted RBP5.39□□□□□ -1.55
COPS7A-211ENST00000540408 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
COPS7A-211ENST00000540408 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
COPS7A-211ENST00000540408 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
COPS7A-211ENST00000540408 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
COPS7A-211ENST00000540408 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
COPS7A-211ENST00000540408 SPRR2EP22531 72 aa5.36□□□□□ -1.55
COPS7A-211ENST00000540408 SPRR2BP35325 72 aa5.36□□□□□ -1.55
COPS7A-211ENST00000540408 SPRR2AP35326 72 aa5.36□□□□□ -1.55
COPS7A-211ENST00000540408 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
COPS7A-211ENST00000540408 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms