RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
SCARB1-206ENST00000539320 LINC00313P59037 77 aa11.36□□□□□ -0.59
SCARB1-206ENST00000539320 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
SCARB1-206ENST00000539320 CCKP06307 115 aa11.34□□□□□ -0.59
SCARB1-206ENST00000539320 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
SCARB1-206ENST00000539320 UBE2V1Q13404 147 aa11.33□□□□□ -0.6
SCARB1-206ENST00000539320 LINC00472Q9H8W2 130 aa11.31□□□□□ -0.6
SCARB1-206ENST00000539320 DEFB116Q30KQ4 102 aa11.29□□□□□ -0.6
SCARB1-206ENST00000539320 NOTCH2NLQ7Z3S9 236 aa11.28□□□□□ -0.6
SCARB1-206ENST00000539320 H3BT86 120 aa11.27□□□□□ -0.61
SCARB1-206ENST00000539320 PRO0461Q9UI25 63 aa11.27□□□□□ -0.61
SCARB1-206ENST00000539320 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
SCARB1-206ENST00000539320 VPS25Q9BRG1 176 aa11.26□□□□□ -0.61
SCARB1-206ENST00000539320 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
SCARB1-206ENST00000539320 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
SCARB1-206ENST00000539320 DSCR8Q96T75 97 aa11.21□□□□□ -0.61
SCARB1-206ENST00000539320 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
SCARB1-206ENST00000539320 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
SCARB1-206ENST00000539320 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
SCARB1-206ENST00000539320 F8W1H4 67 aa11.19□□□□□ -0.62
SCARB1-206ENST00000539320 A0A1B0GVX0 72 aa11.18□□□□□ -0.62
SCARB1-206ENST00000539320 KRTAP9-8Q9BYQ0 159 aa11.17□□□□□ -0.62
SCARB1-206ENST00000539320 HRES1P13985 223 aa11.16□□□□□ -0.62
SCARB1-206ENST00000539320 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
SCARB1-206ENST00000539320 MPLKIPQ8TAP9 179 aa11.14□□□□□ -0.63
SCARB1-206ENST00000539320 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
SCARB1-206ENST00000539320 JMJD7-PLA2G4BH0Y9G9 81 aa11.13□□□□□ -0.63
SCARB1-206ENST00000539320 J3KT08 172 aa11.12□□□□□ -0.63
SCARB1-206ENST00000539320 C14orf132Q9NPU4 83 aa11.12□□□□□ -0.63
SCARB1-206ENST00000539320 ETDBQ3ZM63 59 aa11.11□□□□□ -0.63
SCARB1-206ENST00000539320 Q6ZQT0 140 aa11.08□□□□□ -0.64
SCARB1-206ENST00000539320 ZCCHC13Q8WW36 166 aaKnown RBP11.05□□□□□ -0.64
SCARB1-206ENST00000539320 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.65
SCARB1-206ENST00000539320 NDUFB1O75438 58 aa11.02□□□□□ -0.65
SCARB1-206ENST00000539320 MT2AP02795 61 aa11.02□□□□□ -0.65
SCARB1-206ENST00000539320 USH2AO75445 5202 aa11.01□□□□□ -0.65
SCARB1-206ENST00000539320 A0A1B0GW54 56 aa10.98□□□□□ -0.65
SCARB1-206ENST00000539320 Q8N9P0 234 aaPredicted RBP10.98□□□□□ -0.65
SCARB1-206ENST00000539320 PDE6GP18545 87 aa10.97□□□□□ -0.65
SCARB1-206ENST00000539320 SSPOA2VEC9 5147 aa10.97□□□□□ -0.65
SCARB1-206ENST00000539320 A8MWP4 228 aa10.96□□□□□ -0.65
SCARB1-206ENST00000539320 C8orf17Q9NRJ1 99 aa10.96□□□□□ -0.65
SCARB1-206ENST00000539320 SPINK7P58062 85 aa10.95□□□□□ -0.66
SCARB1-206ENST00000539320 MT1FP04733 61 aa10.94□□□□□ -0.66
SCARB1-206ENST00000539320 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
SCARB1-206ENST00000539320 KRTAP10-10P60014 251 aa10.87□□□□□ -0.67
SCARB1-206ENST00000539320 Q6ZVQ6 151 aa10.86□□□□□ -0.67
SCARB1-206ENST00000539320 WFDC13Q8IUB5 93 aa10.85□□□□□ -0.67
SCARB1-206ENST00000539320 PRR15Q8IV56 129 aa10.85□□□□□ -0.67
SCARB1-206ENST00000539320 NREPQ16612 68 aa10.83□□□□□ -0.68
SCARB1-206ENST00000539320 KRTAP9-3Q9BYQ3 159 aa10.83□□□□□ -0.68
SCARB1-206ENST00000539320 LCE2BO14633 110 aa10.81□□□□□ -0.68
SCARB1-206ENST00000539320 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
SCARB1-206ENST00000539320 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.79□□□□□ -0.68
SCARB1-206ENST00000539320 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
SCARB1-206ENST00000539320 TMEM254Q8TBM7 123 aa10.78□□□□□ -0.68
SCARB1-206ENST00000539320 MRPL34Q9BQ48 92 aaKnown RBP10.77□□□□□ -0.69
SCARB1-206ENST00000539320 J3QR89 54 aa10.76□□□□□ -0.69
SCARB1-206ENST00000539320 FAM240AA0A1B0GVK7 77 aa10.72□□□□□ -0.69
SCARB1-206ENST00000539320 ACYP1P07311 99 aa10.72□□□□□ -0.69
SCARB1-206ENST00000539320 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
SCARB1-206ENST00000539320 FCGBPQ9Y6R7 5405 aaPredicted RBP10.71□□□□□ -0.69
SCARB1-206ENST00000539320 K7EQZ3 153 aa10.71□□□□□ -0.69
SCARB1-206ENST00000539320 hDV103S1A0JD37 113 aa10.7□□□□□ -0.7
SCARB1-206ENST00000539320 KRTAP9-7A8MTY7 169 aa10.7□□□□□ -0.7
SCARB1-206ENST00000539320 KRTAP19-1Q8IUB9 90 aa10.7□□□□□ -0.7
SCARB1-206ENST00000539320 K7ERU9 68 aa10.68□□□□□ -0.7
SCARB1-206ENST00000539320 NDUFS5O43920 106 aa10.67□□□□□ -0.7
SCARB1-206ENST00000539320 BPY2O14599 106 aa10.64□□□□□ -0.71
SCARB1-206ENST00000539320 H1FX-AS1Q4G0G2 97 aa10.59□□□□□ -0.71
SCARB1-206ENST00000539320 IGKV2D-30A0A075B6S6 120 aa10.57□□□□□ -0.72
SCARB1-206ENST00000539320 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
SCARB1-206ENST00000539320 Q8N9L7 120 aa10.57□□□□□ -0.72
SCARB1-206ENST00000539320 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
SCARB1-206ENST00000539320 LINC00643Q86TS7 51 aa10.54□□□□□ -0.72
SCARB1-206ENST00000539320 Q5W150 140 aa10.53□□□□□ -0.72
SCARB1-206ENST00000539320 CXCL6P80162 114 aa10.51□□□□□ -0.73
SCARB1-206ENST00000539320 CASC2Q6XLA1 102 aa10.51□□□□□ -0.73
SCARB1-206ENST00000539320 HCG22E2RYF7 251 aa10.49□□□□□ -0.73
SCARB1-206ENST00000539320 ATP5EP2Q5VTU8 51 aa10.49□□□□□ -0.73
SCARB1-206ENST00000539320 KRTAP19-6Q3LI70 58 aa10.47□□□□□ -0.73
SCARB1-206ENST00000539320 HIST1H4AP62805 103 aaKnown RBP10.44□□□□□ -0.74
SCARB1-206ENST00000539320 MACF1Q9UPN3 7388 aaKnown RBP10.41□□□□□ -0.74
SCARB1-206ENST00000539320 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
SCARB1-206ENST00000539320 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
SCARB1-206ENST00000539320 A0A087WVE0 104 aa10.37□□□□□ -0.75
SCARB1-206ENST00000539320 SYNE2Q8WXH0 6885 aaKnown RBP10.25□□□□□ -0.77
SCARB1-206ENST00000539320 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
SCARB1-206ENST00000539320 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
SCARB1-206ENST00000539320 KRTAP3-1Q9BYR8 98 aa10.21□□□□□ -0.77
SCARB1-206ENST00000539320 S4R3F8 94 aa10.2□□□□□ -0.78
SCARB1-206ENST00000539320 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
SCARB1-206ENST00000539320 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
SCARB1-206ENST00000539320 C1orf64Q8NEQ6 169 aa10.17□□□□□ -0.78
SCARB1-206ENST00000539320 TP53AIP1Q9HCN2 124 aa10.17□□□□□ -0.78
SCARB1-206ENST00000539320 SCGB1A1P11684 91 aa10.12□□□□□ -0.79
SCARB1-206ENST00000539320 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
SCARB1-206ENST00000539320 LCA10Q71F78 164 aa10.1□□□□□ -0.79
SCARB1-206ENST00000539320 KRTAP6-3Q3LI67 103 aa10.04□□□□□ -0.8
SCARB1-206ENST00000539320 OCR1Q9BZK8 76 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms