RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KMT2BQ9UMN6 2715 aaPredicted RBP3.53□□□□□ -1.84
SORT1-209ENST00000538502 STAB2Q8WWQ8 2551 aa3.52□□□□□ -1.85
SORT1-209ENST00000538502 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
SORT1-209ENST00000538502 FLNCQ14315 2725 aa3.51□□□□□ -1.85
SORT1-209ENST00000538502 MGAQ8IWI9 3026 aa3.5□□□□□ -1.85
SORT1-209ENST00000538502 NOTCH1P46531 2555 aa3.5□□□□□ -1.85
SORT1-209ENST00000538502 WDFY3Q8IZQ1 3526 aa3.5□□□□□ -1.85
SORT1-209ENST00000538502 COL6A5A8TX70 2615 aa3.49□□□□□ -1.85
SORT1-209ENST00000538502 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
SORT1-209ENST00000538502 TEP1Q99973 2627 aaKnown RBP3.49□□□□□ -1.85
SORT1-209ENST00000538502 NBEAL2Q6ZNJ1 2754 aa3.48□□□□□ -1.85
SORT1-209ENST00000538502 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
SORT1-209ENST00000538502 FRYQ5TBA9 3013 aa3.47□□□□□ -1.85
SORT1-209ENST00000538502 CFAP47Q6ZTR5 3102 aa3.47□□□□□ -1.85
SORT1-209ENST00000538502 FRYLO94915 3013 aa3.46□□□□□ -1.86
SORT1-209ENST00000538502 INE1O15225 51 aa3.46□□□□□ -1.86
SORT1-209ENST00000538502 HRNRQ86YZ3 2850 aaPredicted RBP3.45□□□□□ -1.86
SORT1-209ENST00000538502 ADGRG4Q8IZF6 3080 aa3.45□□□□□ -1.86
SORT1-209ENST00000538502 DMXL1Q9Y485 3027 aa3.44□□□□□ -1.86
SORT1-209ENST00000538502 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
SORT1-209ENST00000538502 ITPR2Q14571 2701 aa3.44□□□□□ -1.86
SORT1-209ENST00000538502 SETXQ7Z333 2677 aaKnown RBP3.43□□□□□ -1.86
SORT1-209ENST00000538502 A0A1B0GVY2 172 aa3.42□□□□□ -1.86
SORT1-209ENST00000538502 APCP25054 2843 aa3.42□□□□□ -1.86
SORT1-209ENST00000538502 IGSF10Q6WRI0 2623 aa3.41□□□□□ -1.86
SORT1-209ENST00000538502 NSD1Q96L73 2696 aaPredicted RBP3.41□□□□□ -1.86
SORT1-209ENST00000538502 DMXL2Q8TDJ6 3036 aa3.4□□□□□ -1.86
SORT1-209ENST00000538502 ASPMQ8IZT6 3477 aa3.4□□□□□ -1.86
SORT1-209ENST00000538502 TACC2O95359 2948 aa3.4□□□□□ -1.87
SORT1-209ENST00000538502 BOD1L1Q8NFC6 3051 aa3.39□□□□□ -1.87
SORT1-209ENST00000538502 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
SORT1-209ENST00000538502 ITPR1Q14643 2758 aa3.39□□□□□ -1.87
SORT1-209ENST00000538502 MUC3AQ02505 3323 aa3.38□□□□□ -1.87
SORT1-209ENST00000538502 MAP1AP78559 2803 aaPredicted RBP3.38□□□□□ -1.87
SORT1-209ENST00000538502 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
SORT1-209ENST00000538502 ZANQ9Y493 2812 aa3.37□□□□□ -1.87
SORT1-209ENST00000538502 NIPBLQ6KC79 2804 aaeCLIP3.37□□□□□ -1.87
SORT1-209ENST00000538502 ATMQ13315 3056 aa3.37□□□□□ -1.87
SORT1-209ENST00000538502 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
SORT1-209ENST00000538502 MXRA5Q9NR99 2828 aa3.35□□□□□ -1.87
SORT1-209ENST00000538502 LOC400499M0QZD8 3231 aa3.35□□□□□ -1.87
SORT1-209ENST00000538502 UTP20O75691 2785 aaKnown RBP3.35□□□□□ -1.87
SORT1-209ENST00000538502 DCHS1Q96JQ0 3298 aa3.35□□□□□ -1.87
SORT1-209ENST00000538502 UBR5O95071 2799 aaPredicted RBP3.34□□□□□ -1.87
SORT1-209ENST00000538502 ZFHX4Q86UP3 3567 aa3.34□□□□□ -1.87
SORT1-209ENST00000538502 KALRNO60229 2985 aa3.33□□□□□ -1.88
SORT1-209ENST00000538502 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
SORT1-209ENST00000538502 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
SORT1-209ENST00000538502 DMDP11532 3685 aa3.31□□□□□ -1.88
SORT1-209ENST00000538502 COL12A1Q99715 3063 aa3.3□□□□□ -1.88
SORT1-209ENST00000538502 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
SORT1-209ENST00000538502 NF1P21359 2839 aa3.28□□□□□ -1.88
SORT1-209ENST00000538502 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.89
SORT1-209ENST00000538502 DCHS2Q6V1P9 2916 aa3.26□□□□□ -1.89
SORT1-209ENST00000538502 LRBAP50851 2863 aa3.26□□□□□ -1.89
SORT1-209ENST00000538502 LAMA5O15230 3695 aa3.26□□□□□ -1.89
SORT1-209ENST00000538502 CSMD1Q96PZ7 3565 aa3.26□□□□□ -1.89
SORT1-209ENST00000538502 ASH1LQ9NR48 2969 aaKnown RBP3.24□□□□□ -1.89
SORT1-209ENST00000538502 HIVEP1P15822 2718 aa3.23□□□□□ -1.89
SORT1-209ENST00000538502 RELNP78509 3460 aa3.23□□□□□ -1.89
SORT1-209ENST00000538502 CUBNO60494 3623 aa3.21□□□□□ -1.89
SORT1-209ENST00000538502 CRYBG3Q68DQ2 2970 aa3.2□□□□□ -1.9
SORT1-209ENST00000538502 FBN2P35556 2912 aa3.19□□□□□ -1.9
SORT1-209ENST00000538502 SMG1Q96Q15 3661 aaKnown RBP3.18□□□□□ -1.9
SORT1-209ENST00000538502 BSNQ9UPA5 3926 aa3.18□□□□□ -1.9
SORT1-209ENST00000538502 SVEP1Q4LDE5 3571 aa3.17□□□□□ -1.9
SORT1-209ENST00000538502 VWFP04275 2813 aa3.17□□□□□ -1.9
SORT1-209ENST00000538502 KRTAP3-2Q9BYR7 98 aa3.16□□□□□ -1.9
SORT1-209ENST00000538502 TENM3Q9P273 2699 aa3.15□□□□□ -1.9
SORT1-209ENST00000538502 TGP01266 2768 aa3.15□□□□□ -1.9
SORT1-209ENST00000538502 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.91
SORT1-209ENST00000538502 TENM1Q9UKZ4 2725 aa3.14□□□□□ -1.91
SORT1-209ENST00000538502 KRTAP3-3Q9BYR6 98 aa3.13□□□□□ -1.91
SORT1-209ENST00000538502 CELSR1Q9NYQ6 3014 aa3.11□□□□□ -1.91
SORT1-209ENST00000538502 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
SORT1-209ENST00000538502 KRTAP10-12P60413 245 aa3.09□□□□□ -1.92
SORT1-209ENST00000538502 PDZD2O15018 2839 aa3.08□□□□□ -1.92
SORT1-209ENST00000538502 SPENQ96T58 3664 aaKnown RBP3.08□□□□□ -1.92
SORT1-209ENST00000538502 NBPF19A0A087WUL8 3843 aa3.07□□□□□ -1.92
SORT1-209ENST00000538502 KRTAP12-3P60328 96 aa3.03□□□□□ -1.93
SORT1-209ENST00000538502 TENM2Q9NT68 2774 aa3□□□□□ -1.93
SORT1-209ENST00000538502 OTOGQ6ZRI0 2925 aa2.99□□□□□ -1.93
SORT1-209ENST00000538502 CSMD2Q7Z408 3487 aa2.98□□□□□ -1.93
SORT1-209ENST00000538502 LCE3AQ5TA76 89 aa2.96□□□□□ -1.93
SORT1-209ENST00000538502 PKD1L1Q8TDX9 2849 aa2.95□□□□□ -1.94
SORT1-209ENST00000538502 MT1HL1P0DM35 61 aa2.94□□□□□ -1.94
SORT1-209ENST00000538502 SRRM2Q9UQ35 2752 aaKnown RBP2.93□□□□□ -1.94
SORT1-209ENST00000538502 ZFHX3Q15911 3703 aa2.91□□□□□ -1.94
SORT1-209ENST00000538502 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.94
SORT1-209ENST00000538502 VPS13CQ709C8 3753 aa2.9□□□□□ -1.95
SORT1-209ENST00000538502 ANK3Q12955 4377 aaKnown RBP2.89□□□□□ -1.95
SORT1-209ENST00000538502 KRTAP10-4P60372 401 aaPredicted RBP2.89□□□□□ -1.95
SORT1-209ENST00000538502 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
SORT1-209ENST00000538502 AKAP9Q99996 3911 aa2.88□□□□□ -1.95
SORT1-209ENST00000538502 HUWE1Q7Z6Z7 4374 aaKnown RBP2.86□□□□□ -1.95
SORT1-209ENST00000538502 FBN1P35555 2871 aaKnown RBP2.85□□□□□ -1.95
SORT1-209ENST00000538502 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
SORT1-209ENST00000538502 ALMS1Q8TCU4 4167 aa2.84□□□□□ -1.95
SORT1-209ENST00000538502 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
SORT1-209ENST00000538502 MEGF8Q7Z7M0 2845 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms