RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
AC055720.2-201ENST00000537724 COL6A5A8TX70 2615 aa1.07□□□□□ -2.24
AC055720.2-201ENST00000537724 PDZD2O15018 2839 aa1.07□□□□□ -2.24
AC055720.2-201ENST00000537724 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
AC055720.2-201ENST00000537724 VPS13BQ7Z7G8 4022 aa1.05□□□□□ -2.24
AC055720.2-201ENST00000537724 TENM2Q9NT68 2774 aa1.05□□□□□ -2.24
AC055720.2-201ENST00000537724 TENM1Q9UKZ4 2725 aa1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 HIVEP3Q5T1R4 2406 aa1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 TMEM167AQ8TBQ9 72 aa1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 U3KQA8 63 aa1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 SACSQ9NZJ4 4579 aa1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 ACACAQ13085 2346 aa1.04□□□□□ -2.24
AC055720.2-201ENST00000537724 FLNCQ14315 2725 aa1.03□□□□□ -2.24
AC055720.2-201ENST00000537724 EPG5Q9HCE0 2579 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 TNP1P09430 55 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 NF1P21359 2839 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 USP24Q9UPU5 2620 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 VPS13DQ5THJ4 4388 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 KMT2AQ03164 3969 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 UNC79Q9P2D8 2635 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 NOTCH1P46531 2555 aa1.02□□□□□ -2.25
AC055720.2-201ENST00000537724 PTPN13Q12923 2485 aa1.01□□□□□ -2.25
AC055720.2-201ENST00000537724 PKD1L1Q8TDX9 2849 aa1.01□□□□□ -2.25
AC055720.2-201ENST00000537724 DEFB104AQ8WTQ1 72 aa1.01□□□□□ -2.25
AC055720.2-201ENST00000537724 PRM1P04553 51 aa1□□□□□ -2.25
AC055720.2-201ENST00000537724 CCDC168Q8NDH2 2452 aa1□□□□□ -2.25
AC055720.2-201ENST00000537724 HUWE1Q7Z6Z7 4374 aaKnown RBP1□□□□□ -2.25
AC055720.2-201ENST00000537724 GCN1Q92616 2671 aaKnown RBP1□□□□□ -2.25
AC055720.2-201ENST00000537724 SETXQ7Z333 2677 aaKnown RBP0.99□□□□□ -2.25
AC055720.2-201ENST00000537724 SPTBN4Q9H254 2564 aa0.99□□□□□ -2.25
AC055720.2-201ENST00000537724 RIF1Q5UIP0 2472 aaKnown RBP0.99□□□□□ -2.25
AC055720.2-201ENST00000537724 MYCBP2O75592 4640 aa0.98□□□□□ -2.25
AC055720.2-201ENST00000537724 ZFYVE26Q68DK2 2539 aa0.98□□□□□ -2.25
AC055720.2-201ENST00000537724 CRYBG3Q68DQ2 2970 aa0.98□□□□□ -2.25
AC055720.2-201ENST00000537724 ACANP16112 2415 aa0.97□□□□□ -2.25
AC055720.2-201ENST00000537724 ZZEF1O43149 2961 aa0.97□□□□□ -2.25
AC055720.2-201ENST00000537724 NSD1Q96L73 2696 aaPredicted RBP0.97□□□□□ -2.25
AC055720.2-201ENST00000537724 USP9YO00507 2555 aaPredicted RBP0.96□□□□□ -2.26
AC055720.2-201ENST00000537724 APC2O95996 2303 aa0.95□□□□□ -2.26
AC055720.2-201ENST00000537724 FAM186AA6NE01 2351 aa0.95□□□□□ -2.26
AC055720.2-201ENST00000537724 TACC2O95359 2948 aa0.95□□□□□ -2.26
AC055720.2-201ENST00000537724 DNAH3Q8TD57 4116 aa0.94□□□□□ -2.26
AC055720.2-201ENST00000537724 STAB1Q9NY15 2570 aa0.94□□□□□ -2.26
AC055720.2-201ENST00000537724 SPENQ96T58 3664 aaKnown RBP0.94□□□□□ -2.26
AC055720.2-201ENST00000537724 MTORP42345 2549 aa0.93□□□□□ -2.26
AC055720.2-201ENST00000537724 H3BNG1 76 aa0.92□□□□□ -2.26
AC055720.2-201ENST00000537724 LRRK2Q5S007 2527 aa0.92□□□□□ -2.26
AC055720.2-201ENST00000537724 FRYQ5TBA9 3013 aa0.92□□□□□ -2.26
AC055720.2-201ENST00000537724 ITPR3Q14573 2671 aa0.92□□□□□ -2.26
AC055720.2-201ENST00000537724 MGAQ8IWI9 3026 aa0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 NBPF19A0A087WUL8 3843 aa0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 FLNBO75369 2602 aaKnown RBP0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 PKD1P98161 4303 aa0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 DYNC2H1Q8NCM8 4307 aaKnown RBP0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 RPL39P5Q59GN2 51 aa0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 DCHS2Q6V1P9 2916 aa0.91□□□□□ -2.26
AC055720.2-201ENST00000537724 COL12A1Q99715 3063 aa0.9□□□□□ -2.27
AC055720.2-201ENST00000537724 PKHD1L1Q86WI1 4243 aa0.9□□□□□ -2.27
AC055720.2-201ENST00000537724 ZFHX4Q86UP3 3567 aa0.89□□□□□ -2.27
AC055720.2-201ENST00000537724 ANKRD11Q6UB99 2663 aaPredicted RBP0.89□□□□□ -2.27
AC055720.2-201ENST00000537724 ANK3Q12955 4377 aaKnown RBP0.89□□□□□ -2.27
AC055720.2-201ENST00000537724 DNAH8Q96JB1 4490 aa0.89□□□□□ -2.27
AC055720.2-201ENST00000537724 HIVEP1P15822 2718 aa0.88□□□□□ -2.27
AC055720.2-201ENST00000537724 DNAH2Q9P225 4427 aa0.88□□□□□ -2.27
AC055720.2-201ENST00000537724 ANKHD1Q8IWZ3 2542 aaKnown RBP0.88□□□□□ -2.27
AC055720.2-201ENST00000537724 NBEAL2Q6ZNJ1 2754 aa0.88□□□□□ -2.27
AC055720.2-201ENST00000537724 DMXL1Q9Y485 3027 aa0.88□□□□□ -2.27
AC055720.2-201ENST00000537724 CUBNO60494 3623 aa0.88□□□□□ -2.27
AC055720.2-201ENST00000537724 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
AC055720.2-201ENST00000537724 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
AC055720.2-201ENST00000537724 LAMA5O15230 3695 aa0.86□□□□□ -2.27
AC055720.2-201ENST00000537724 CEP250Q9BV73 2442 aa0.86□□□□□ -2.27
AC055720.2-201ENST00000537724 SPART-AS1P0CW21 52 aa0.86□□□□□ -2.27
AC055720.2-201ENST00000537724 SPRR2DP22532 72 aa0.86□□□□□ -2.27
AC055720.2-201ENST00000537724 DEFB110Q30KQ9 67 aa0.86□□□□□ -2.27
AC055720.2-201ENST00000537724 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
AC055720.2-201ENST00000537724 RANBP2P49792 3224 aaKnown RBP0.85□□□□□ -2.27
AC055720.2-201ENST00000537724 HSPG2P98160 4391 aa0.85□□□□□ -2.27
AC055720.2-201ENST00000537724 SPG11Q96JI7 2443 aa0.85□□□□□ -2.27
AC055720.2-201ENST00000537724 HECTD4Q9Y4D8 3996 aa0.85□□□□□ -2.27
AC055720.2-201ENST00000537724 NCOR2Q9Y618 2525 aa0.84□□□□□ -2.27
AC055720.2-201ENST00000537724 H3BUX3 64 aa0.84□□□□□ -2.27
AC055720.2-201ENST00000537724 ACACBO00763 2458 aa0.83□□□□□ -2.28
AC055720.2-201ENST00000537724 DEFB108AA8MXU0 73 aa0.83□□□□□ -2.28
AC055720.2-201ENST00000537724 SPRR2BP35325 72 aa0.83□□□□□ -2.28
AC055720.2-201ENST00000537724 DNAH7Q8WXX0 4024 aa0.83□□□□□ -2.28
AC055720.2-201ENST00000537724 LPAP08519 4548 aa0.83□□□□□ -2.28
AC055720.2-201ENST00000537724 NBEAQ8NFP9 2946 aa0.82□□□□□ -2.28
AC055720.2-201ENST00000537724 CELSR3Q9NYQ7 3312 aa0.82□□□□□ -2.28
AC055720.2-201ENST00000537724 SONP18583 2426 aaKnown RBP0.82□□□□□ -2.28
AC055720.2-201ENST00000537724 COL7A1Q02388 2944 aa0.82□□□□□ -2.28
AC055720.2-201ENST00000537724 DNAH9Q9NYC9 4486 aa0.81□□□□□ -2.28
AC055720.2-201ENST00000537724 LRP1Q07954 4544 aaKnown RBP0.81□□□□□ -2.28
AC055720.2-201ENST00000537724 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
AC055720.2-201ENST00000537724 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
AC055720.2-201ENST00000537724 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
AC055720.2-201ENST00000537724 TLN2Q9Y4G6 2542 aa0.79□□□□□ -2.28
AC055720.2-201ENST00000537724 RELNP78509 3460 aa0.79□□□□□ -2.28
AC055720.2-201ENST00000537724 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms