RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 KRTAP13-2Q52LG2 175 aa5.46□□□□□ -1.54
PTPRR-205ENST00000537619 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.54
PTPRR-205ENST00000537619 A0A1B0GVX0 72 aa5.45□□□□□ -1.54
PTPRR-205ENST00000537619 H0Y9P7 68 aa5.45□□□□□ -1.54
PTPRR-205ENST00000537619 LCE2BO14633 110 aa5.45□□□□□ -1.54
PTPRR-205ENST00000537619 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
PTPRR-205ENST00000537619 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
PTPRR-205ENST00000537619 H3BPC8 53 aa5.44□□□□□ -1.54
PTPRR-205ENST00000537619 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
PTPRR-205ENST00000537619 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
PTPRR-205ENST00000537619 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
PTPRR-205ENST00000537619 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-205ENST00000537619 LINC00336Q6ZUF6 198 aa5.43□□□□□ -1.54
PTPRR-205ENST00000537619 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
PTPRR-205ENST00000537619 KRTAP1-4P0C5Y4 121 aa5.42□□□□□ -1.54
PTPRR-205ENST00000537619 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
PTPRR-205ENST00000537619 PKHD1P08F94 4074 aa5.42□□□□□ -1.54
PTPRR-205ENST00000537619 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
PTPRR-205ENST00000537619 PRR4Q16378 134 aa5.41□□□□□ -1.54
PTPRR-205ENST00000537619 SPINK6Q6UWN8 80 aa5.41□□□□□ -1.54
PTPRR-205ENST00000537619 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
PTPRR-205ENST00000537619 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
PTPRR-205ENST00000537619 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
PTPRR-205ENST00000537619 MRPL34Q9BQ48 92 aaKnown RBP5.38□□□□□ -1.55
PTPRR-205ENST00000537619 NDUFS5O43920 106 aa5.38□□□□□ -1.55
PTPRR-205ENST00000537619 C8orf87E5RJ46 101 aa5.36□□□□□ -1.55
PTPRR-205ENST00000537619 RYR2Q92736 4967 aa5.36□□□□□ -1.55
PTPRR-205ENST00000537619 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
PTPRR-205ENST00000537619 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
PTPRR-205ENST00000537619 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
PTPRR-205ENST00000537619 MPLKIPQ8TAP9 179 aa5.35□□□□□ -1.55
PTPRR-205ENST00000537619 A0A1B0GVY2 172 aa5.34□□□□□ -1.55
PTPRR-205ENST00000537619 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
PTPRR-205ENST00000537619 Q5W150 140 aa5.34□□□□□ -1.55
PTPRR-205ENST00000537619 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
PTPRR-205ENST00000537619 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
PTPRR-205ENST00000537619 PCOTHQ58A44 107 aa5.33□□□□□ -1.56
PTPRR-205ENST00000537619 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
PTPRR-205ENST00000537619 FAT1Q14517 4588 aa5.32□□□□□ -1.56
PTPRR-205ENST00000537619 Q1T7F1 81 aa5.31□□□□□ -1.56
PTPRR-205ENST00000537619 V9GYY9 64 aa5.31□□□□□ -1.56
PTPRR-205ENST00000537619 IGLV7-46A0A075B6I9 117 aa5.3□□□□□ -1.56
PTPRR-205ENST00000537619 SMR3BP02814 79 aaPredicted RBP5.3□□□□□ -1.56
PTPRR-205ENST00000537619 LINC00313P59037 77 aa5.3□□□□□ -1.56
PTPRR-205ENST00000537619 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
PTPRR-205ENST00000537619 SPINK1P00995 79 aa5.29□□□□□ -1.56
PTPRR-205ENST00000537619 KMT2CQ8NEZ4 4911 aaKnown RBP5.29□□□□□ -1.56
PTPRR-205ENST00000537619 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
PTPRR-205ENST00000537619 PRR26Q8N8Z3 221 aa5.28□□□□□ -1.56
PTPRR-205ENST00000537619 LOC101927531A0A1B0GV80 90 aa5.27□□□□□ -1.57
PTPRR-205ENST00000537619 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
PTPRR-205ENST00000537619 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
PTPRR-205ENST00000537619 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
PTPRR-205ENST00000537619 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
PTPRR-205ENST00000537619 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
PTPRR-205ENST00000537619 COA5Q86WW8 74 aa5.25□□□□□ -1.57
PTPRR-205ENST00000537619 RETNLBQ9BQ08 111 aa5.25□□□□□ -1.57
PTPRR-205ENST00000537619 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
PTPRR-205ENST00000537619 HRES1P13985 223 aa5.2□□□□□ -1.58
PTPRR-205ENST00000537619 SEC61GP60059 68 aa5.2□□□□□ -1.58
PTPRR-205ENST00000537619 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
PTPRR-205ENST00000537619 PSPHP1O15172 72 aa5.19□□□□□ -1.58
PTPRR-205ENST00000537619 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
PTPRR-205ENST00000537619 J3QL48 77 aa5.17□□□□□ -1.58
PTPRR-205ENST00000537619 A8MUN3 132 aa5.17□□□□□ -1.58
PTPRR-205ENST00000537619 RYR3Q15413 4870 aa5.16□□□□□ -1.58
PTPRR-205ENST00000537619 Q5VV11 94 aa5.15□□□□□ -1.58
PTPRR-205ENST00000537619 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
PTPRR-205ENST00000537619 HSPG2P98160 4391 aa5.14□□□□□ -1.59
PTPRR-205ENST00000537619 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
PTPRR-205ENST00000537619 IGKV2D-30A0A075B6S6 120 aa5.12□□□□□ -1.59
PTPRR-205ENST00000537619 ACYP2P14621 99 aa5.12□□□□□ -1.59
PTPRR-205ENST00000537619 LRP1Q07954 4544 aaKnown RBP5.12□□□□□ -1.59
PTPRR-205ENST00000537619 RYR1P21817 5038 aa5.12□□□□□ -1.59
PTPRR-205ENST00000537619 CHKB-CPT1BH3BT56 60 aa5.11□□□□□ -1.59
PTPRR-205ENST00000537619 TNXBP22105 4242 aa5.11□□□□□ -1.59
PTPRR-205ENST00000537619 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
PTPRR-205ENST00000537619 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
PTPRR-205ENST00000537619 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
PTPRR-205ENST00000537619 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
PTPRR-205ENST00000537619 LINC01558Q9Y6Z2 57 aa5.09□□□□□ -1.6
PTPRR-205ENST00000537619 A8MU10 97 aa5.08□□□□□ -1.6
PTPRR-205ENST00000537619 ATP11AUNQ6ZP68 121 aa5.07□□□□□ -1.6
PTPRR-205ENST00000537619 Q75L30 129 aa5.07□□□□□ -1.6
PTPRR-205ENST00000537619 A8MUU9 505 aa5.07□□□□□ -1.6
PTPRR-205ENST00000537619 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-205ENST00000537619 Q5VSD8 79 aa5.07□□□□□ -1.6
PTPRR-205ENST00000537619 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
PTPRR-205ENST00000537619 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
PTPRR-205ENST00000537619 Q8N1X5 172 aa5.06□□□□□ -1.6
PTPRR-205ENST00000537619 A6NED7 52 aa5.05□□□□□ -1.6
PTPRR-205ENST00000537619 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
PTPRR-205ENST00000537619 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
PTPRR-205ENST00000537619 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
PTPRR-205ENST00000537619 CDC42SE1Q9NRR8 79 aa5.01□□□□□ -1.61
PTPRR-205ENST00000537619 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
PTPRR-205ENST00000537619 LCA10Q71F78 164 aa4.99□□□□□ -1.61
PTPRR-205ENST00000537619 SPINK7P58062 85 aa4.99□□□□□ -1.61
PTPRR-205ENST00000537619 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.62
PTPRR-205ENST00000537619 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms