RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
MKS1-204ENST00000537529 NDUFS5O43920 106 aa9.12□□□□□ -0.95
MKS1-204ENST00000537529 Q5XG85 94 aa9.12□□□□□ -0.95
MKS1-204ENST00000537529 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
MKS1-204ENST00000537529 CYP4F30PQ9H0H9 118 aa9.1□□□□□ -0.95
MKS1-204ENST00000537529 NOTCH2NLQ7Z3S9 236 aa9.09□□□□□ -0.95
MKS1-204ENST00000537529 HYDINQ4G0P3 5121 aa9.09□□□□□ -0.95
MKS1-204ENST00000537529 C8orf87E5RJ46 101 aa9.08□□□□□ -0.96
MKS1-204ENST00000537529 SPANXA2-OT1Q8N9U9 137 aa9.07□□□□□ -0.96
MKS1-204ENST00000537529 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
MKS1-204ENST00000537529 PRR4Q16378 134 aa9.05□□□□□ -0.96
MKS1-204ENST00000537529 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
MKS1-204ENST00000537529 FP248Q71RG6 208 aaPredicted RBP9.04□□□□□ -0.96
MKS1-204ENST00000537529 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
MKS1-204ENST00000537529 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
MKS1-204ENST00000537529 LRP1BQ9NZR2 4599 aa9.03□□□□□ -0.96
MKS1-204ENST00000537529 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
MKS1-204ENST00000537529 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
MKS1-204ENST00000537529 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
MKS1-204ENST00000537529 LINC00313P59037 77 aa8.99□□□□□ -0.97
MKS1-204ENST00000537529 SPINK1P00995 79 aa8.96□□□□□ -0.97
MKS1-204ENST00000537529 PCOTHQ58A44 107 aa8.96□□□□□ -0.98
MKS1-204ENST00000537529 SACSQ9NZJ4 4579 aa8.95□□□□□ -0.98
MKS1-204ENST00000537529 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
MKS1-204ENST00000537529 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
MKS1-204ENST00000537529 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
MKS1-204ENST00000537529 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
MKS1-204ENST00000537529 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
MKS1-204ENST00000537529 Q5W150 140 aa8.92□□□□□ -0.98
MKS1-204ENST00000537529 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
MKS1-204ENST00000537529 Q8N9P0 234 aaPredicted RBP8.91□□□□□ -0.98
MKS1-204ENST00000537529 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
MKS1-204ENST00000537529 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
MKS1-204ENST00000537529 SPAG11AQ6PDA7 123 aa8.89□□□□□ -0.99
MKS1-204ENST00000537529 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
MKS1-204ENST00000537529 VPS13BQ7Z7G8 4022 aa8.87□□□□□ -0.99
MKS1-204ENST00000537529 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
MKS1-204ENST00000537529 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
MKS1-204ENST00000537529 Q1T7F1 81 aa8.85□□□□□ -0.99
MKS1-204ENST00000537529 COA5Q86WW8 74 aa8.84□□□□□ -0.99
MKS1-204ENST00000537529 PKHD1P08F94 4074 aa8.82□□□□□ -1
MKS1-204ENST00000537529 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
MKS1-204ENST00000537529 V9GYY9 64 aa8.8□□□□□ -1
MKS1-204ENST00000537529 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
MKS1-204ENST00000537529 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
MKS1-204ENST00000537529 RYR2Q92736 4967 aa8.73□□□□□ -1.01
MKS1-204ENST00000537529 HRES1P13985 223 aa8.73□□□□□ -1.01
MKS1-204ENST00000537529 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.01
MKS1-204ENST00000537529 PSPHP1O15172 72 aa8.69□□□□□ -1.02
MKS1-204ENST00000537529 ACYP2P14621 99 aa8.68□□□□□ -1.02
MKS1-204ENST00000537529 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
MKS1-204ENST00000537529 IGKV2D-30A0A075B6S6 120 aa8.66□□□□□ -1.02
MKS1-204ENST00000537529 A8MUN3 132 aa8.66□□□□□ -1.02
MKS1-204ENST00000537529 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
MKS1-204ENST00000537529 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
MKS1-204ENST00000537529 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
MKS1-204ENST00000537529 Q5VV11 94 aa8.61□□□□□ -1.03
MKS1-204ENST00000537529 FAT1Q14517 4588 aa8.61□□□□□ -1.03
MKS1-204ENST00000537529 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
MKS1-204ENST00000537529 Q5VSD8 79 aa8.6□□□□□ -1.03
MKS1-204ENST00000537529 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
MKS1-204ENST00000537529 A8MUU9 505 aa8.58□□□□□ -1.04
MKS1-204ENST00000537529 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
MKS1-204ENST00000537529 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
MKS1-204ENST00000537529 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
MKS1-204ENST00000537529 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
MKS1-204ENST00000537529 KMT2CQ8NEZ4 4911 aaKnown RBP8.57□□□□□ -1.04
MKS1-204ENST00000537529 Q75L30 129 aa8.54□□□□□ -1.04
MKS1-204ENST00000537529 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
MKS1-204ENST00000537529 Q8N1X5 172 aa8.52□□□□□ -1.05
MKS1-204ENST00000537529 A6NED7 52 aa8.44□□□□□ -1.06
MKS1-204ENST00000537529 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
MKS1-204ENST00000537529 HSPG2P98160 4391 aa8.39□□□□□ -1.07
MKS1-204ENST00000537529 SPINK7P58062 85 aa8.38□□□□□ -1.07
MKS1-204ENST00000537529 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
MKS1-204ENST00000537529 A0A1B0GU69 56 aa8.34□□□□□ -1.07
MKS1-204ENST00000537529 RYR3Q15413 4870 aa8.34□□□□□ -1.07
MKS1-204ENST00000537529 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
MKS1-204ENST00000537529 A8MU10 97 aa8.33□□□□□ -1.08
MKS1-204ENST00000537529 LCA10Q71F78 164 aa8.33□□□□□ -1.08
MKS1-204ENST00000537529 ATP11AUNQ6ZP68 121 aa8.32□□□□□ -1.08
MKS1-204ENST00000537529 RYR1P21817 5038 aa8.32□□□□□ -1.08
MKS1-204ENST00000537529 TNXBP22105 4242 aa8.31□□□□□ -1.08
MKS1-204ENST00000537529 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
MKS1-204ENST00000537529 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
MKS1-204ENST00000537529 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
MKS1-204ENST00000537529 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
MKS1-204ENST00000537529 LRP1Q07954 4544 aaKnown RBP8.28□□□□□ -1.08
MKS1-204ENST00000537529 XP32Q5T750 250 aa8.26□□□□□ -1.09
MKS1-204ENST00000537529 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
MKS1-204ENST00000537529 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
MKS1-204ENST00000537529 SEC61GP60059 68 aa8.18□□□□□ -1.1
MKS1-204ENST00000537529 PMAIP1Q13794 54 aa8.18□□□□□ -1.1
MKS1-204ENST00000537529 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
MKS1-204ENST00000537529 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
MKS1-204ENST00000537529 UQCR11O14957 56 aa8.15□□□□□ -1.1
MKS1-204ENST00000537529 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
MKS1-204ENST00000537529 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
MKS1-204ENST00000537529 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
MKS1-204ENST00000537529 A6NN06 94 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms